cluster # 8836

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Oryza sativa
cluster # 8836 cluster # 8836 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8836#0 length = 1903 sequences # 6
consensusID : consensus_8836#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1903
fasta sequence
                              [CGCAACCTTGGGAGCCGGAGGTTTATCCCCACCACGAACGCCTCCTCTTCTTCTTCCGATGCGGGGAGGCTGAGCTCGCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAGATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCCCGGCCGCCGAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTC-ACCAAGCTCCGCAAGCTCCTCATGAT-GTCGCAGGA-CAAGCGCATCCT-CATTGAGAAGATTGCGCACCT-CAAGAACGATCTT-GGACTCCC-GCCGGAGTTCCGCGACACTATCTGCCTCAGGTACCCACAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGGCTGGAGCTCACTCATTGGGACCCTGAATTGGCGGTGTCGGCAGCGGAGGTTGCCGAGGAGGAGAATCGAGCGAGGGAAGAACAAGAGAGGAATCTGATCATTGACCGGCCACTCAAGTTTAATCGGGTGAAGCTACCACAGGGGCTGAAATTATCAAGAGGGGAGGCGCGCAGGGTTGCGCAATTCAAGGAAATGCCATACATTTCGCCGTACTCTGACTTCTCGCATCTGCGATCCGGGTCGGCTGAGAAGGAGAAGCATGCTTGCGGCGTAGTTCATGAGATTTTGAGCCTGACACTTGAGAAGCGCACGCTGGTGGATCATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAATCTCTGCGTGGTATGCTAATTCGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGACAGGGACTCGGTCTTCCTCCGTGAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAACTCGTGCTGCTTAAGGAGAAGATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGGGGTGTGCCGGCAACTAGTGAGGAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGTGAAGGAAGCGATGTAGAAGATGATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATTAGTGAGATTTCTGGTGGCAAATCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGCGAGAATGATGACTCGCCACCAGACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTCAAGGTGACTATGAAGAAAACTGCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTTCCTGATGGCAGACCAAGGGAACGATGGTAAAATGATCTATTTTAGATTGTTTGGTAGAGTGTGTAATCTTTGTTGTTAGTTATTTCATCATATCTAGAAAGTCGCAAAACCCTCAGTCCTTTGAGGTGCTGCTTGAATTTTGTTACCGAGCACATGAATAGCATATCAGAATTTGAACAGTTCACATGAATCATCACTAATATAGTGAACGAATTTGAAGTTGTGGGGGTTTGTGATCAAGCATACTTGGTGATATAAATAGGTGCAAACTGTAACAACTTAAGTATAAATACAAGCTTAATTT]

[+] EMBL AK068658             [CGCAACCTTGGGAGCCGGAGGTTTATCCCCACCACGAACGCCTCCTCTTCTTCTTCCGATGCGGGGAGGCTGAGCTCGCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAGATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCCCGGCCGCCGAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTC ACCAAGCTCCGCAAGCTCCTCATGAT GTCGCAGGA CAAGCGCATCCT CATTGAGAAGATTGCGCACCT CAAGAACGATCTT GGACTCCC GCCGGAGTTCCGCGACACTATCTGCCTCAGGTACCCACAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGGCTGGAGCTCACTCATTGGGACCCTGAATTGGCGGTGTCGGCAGCGGAGGTTGCCGAGGAGGAGAATCGAGCGAGGGAAGAACAAGAGAGGAATCTGATCATTGACCGGCCACTCAAGTTTAATCGGGTGAAGCTACCACAGGGGCTGAAATTATCAAGAGGGGAGGCGCGCAGGGTTGCGCAATTCAAGGAAATGCCATACATTTCGCCGTACTCTGACTTCTCGCATCTGCGATCCGGGTCGGCTGAGAAGGAGAAGCATGCTTGCGGCGTAGTTCATGAGATTTTGAGCCTGACACTTGAGAAGCGCACGCTGGTGGATCATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAATCTCTGCGTGGTATGCTAATTCGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGACAGGGACTCGGTCTTCCTCCGTGAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAACTCGTGCTGCTTAAGGAGAAGATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGGGGTGTGCCGGCAACTAGTGAGGAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGTGAAGGAAGCGATGTAGAAGATGATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATTAGTGAGATTTCTGGTGGCAAATCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGCGAGAATGATGACTCGCCACCAGACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTCAAGGTGACTATGAAGAAAACTGCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTTCCTGATGGCAGACCAAGGGAACGATGGTAAAATGATCTATTTTAGATTGTTTGGTAGAGTGTGTAATCTTTGTTGTTAGTTATTTCATCATATCTAGAAAGTCGCAAAACCCTCAGTCCTTTGAGGTGCTGCTTGAATTTTGTTACCGAGCACATGAATAGCATATCAGAATTTGAACAGTTCACATGAATCATCACTAATATAGTGAACGAATTTGAAGTTGTGGGGGTTTGTGATCAAGCATACTTGGTGATATAAATAGGTGCAAACTGTAACAACTTAAGTATAAATACAAGCTTAATTT]
[+] EMBL CB679236             [                                                             CGGGGAGGCTGAGCTCGCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCACGCCGCCGTGAAGCGGCGCAAGGAGATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCACCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGATCCGCCTTACCCCGGCCGCCGAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTC ACCAAGCTCCGCAAGCTCCTCATGAT GTCGCAGGA CAAGCGCATCCT CATTGAGAAGATTGCGCACCT CAAGAACGATCTT GGACTCCC GCCGGAGATCCGCGACACTATCTGCCTCATGTACCCACAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        ]
[+] EMBL AK104438             [                                                                  AGGCTGAGCTCGCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAGATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCCCGGCCGCCGAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTC ACCAAGCTCCGCAAGCTCCTCATGAT GTCGCAGGA CAAGCGCATCCT CATTGAGAAGATTGCGCACCT CAAGAACGATCTT GGACTCCC GCCGGAGTTCCGCGACACTATCTGCCTCAGGTACCCACAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGGCTGGAGCTCACTCATTGGGACCCTGAATTGGCGGTGTCGGCAGCGGAGGTTGCCGAGGAGGAGAATCGAGCGAGGGAAGAACAAGAGAGGAATCTGATCATTGACCGGCCACTCAAGTTTAATCGGGTGAAGCTACCACAGGGGCTGAAATTATCAAGAGGGGAGGCGCGCAGGGTTGCGCAATTCAAGGAAATGCCATACATTTCGCCGTACTCTGACTTCTCGCATCTGCGATCCGGGTCGGCTGAGAAGGAGAAGCATGCTTGCGGCGTAGTTCATGAGATTTTGAGCCTGACACTTGAGAAGCGCACGCTGGTGGATCATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAATCTCTGCGTGGTATGCTAATTCGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGACAGGGACTCGGTCTTCCTCCGTGAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAACTCGTGCTGCTTAAGGAGAAGATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGGGGTGTGCCGGCAACTAGTGAGGAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGTGAAGGAAGCGATGTAGAAGATGATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATTAGTGAGATTTCTGGTGGCAAATCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGCGAGAATGATGACTCGCCACCAGACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTCAAGGTGACTATGAAGAAAACTGCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTTCCTGATGGCAGACCAAGGGAACGATGGTAAAATGATCTATTTTAGATTGTTTGGTAGAGTGTGTAATCTTTGTTGTTAGTTATTTCATCATATCTAGAAAGTCGCAAAACCCTCAGTCCTTTGAGGTGCTGCTTGAATTTTGTTACCGAGCACATGAATAGCATATCAGAATTTGAACAGTTCACATGAATCATCACTAATATAGTG                                                                                                 ]
[+] EMBL CB681188             [                                                                             GCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCCAGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAGATCCCGATCGACAACGTCATCCACCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCCAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCCCGGCCGCCGAGCGCCTCTACCTCAACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTC ACCAAGCTCCGCAAGCTCCTCATGAT GTCGCATGA CAAGCGCATCCT CATTGAGAAGATTGCGCACCT CAAGAACGATCTT GGACTCCC GCCGGAGTTCCGCGACACTATCTGCCTCAGGTACCCACAGTACTTCCGCGTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL CA754348             [                                                                                                             AGCTGCTCCTCCTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTCTTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCCGGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAGATCCCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAACATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGCGACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTCTTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCACGGTCGCCGAGCGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTCAACCCAGCTCCGCAAGCTCCTCATGATGGCCGCAGGACCAAGCGCATCCTCCATTGAGAAGAATGCGCACCTCCAAGAACGATCTTGGGACTCCCAGCCGGAATTCCGCGAAACTATCTGGCTCAGGTAac                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 ]
[-] EMBL CB681189             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                TTCATGAGATTTTGAGCCTGACACTTGAGAAGCGCACGCTGGTGGATCATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAATCTCTGCGTGGTATGCTAATTCGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGACAGGGACTCGGTCTTCCTCCGTGAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAACTCGTGCTGCTTAAGGAGAAGATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGGGGTGTGCCGGCAACTAGTGAGGAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGTGAAGGAAGCGATGTAGAAGATGATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATTAGTGAGATTTCTGGTGGCAAATCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGCGAGAATGATGACTCGCCACCAGACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTCAAGGTGACTATGAAGAAAACTGCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTTCCTGATGGCAGACCAAGGGAACGATGGTAAAATGATCTATTTTAGATTGTTTGGTAGAGTGTGTAATCTTTGTTGTTAGTTATTTCATCATATCTAGAAAGTCGCAAAACCCTCAGTCCTTTGAGGTGCTGCTTGAATTTTGTTACAGGGCACATGAATAGC                                                                                                                                              ]




>consensus_8836#0
CGCAACCTTGGGAGCCGGAGGTTTATCCCCACCACGAACGCCTCCTCTTCTTCTTCCGAT
GCGGGGAGGCTGAGCTCGCAATCCCCAAAGCTCGCGGAGATGGACGCCAAGCTGCTCCTC
CTCCCCTTCCCCTCGCCGCCGGCCACTCTCCACCACCACCCGCCGCCCCCCAAATCCCTC
TTCCTCGGCGCCTCCCTCCCGCTCCTCCACCCGCCGCCGCCGCTGCGGCTGCTGCGGCCC
GGCGCCCCGCGGCGGCTGGCGGTGGTGGCGCAGGCCGCCGTGAAGCGGCGCAAGGAGATC
CCGTTCGACAACGTCATCCAGCGCGACAAGAAGCTCAAGCTGGTGCTCAAGCTCCGCAAC
ATCCTCGTCTCCAACCCGGACCGCGTCATGAGCCTCCGCGACCTCGGCCGCTTCCGCCGC
GACCTCGGCCTCACCCGCAAGCGCCGCCTCATCGCGCTCCTCAAGCGGTTCCCGGGTGTC
TTCGAGGTCGTCGAGGAGGGCGTCTACTCGCTCAGGTTCCGCCTTACCCCGGCCGCCGAG
CGCCTCTACCTCGACGAGCTCCACCTCAAGAATGAGTCCGAGGGCCTAGCCGTCACCAAG
CTCCGCAAGCTCCTCATGATGTCGCAGGACAAGCGCATCCTCATTGAGAAGATTGCGCAC
CTCAAGAACGATCTTGGACTCCCGCCGGAGTTCCGCGACACTATCTGCCTCAGGTACCCA
CAGTACTTCCGCGTCGTCCAGATGGACCGAGGGCCAGGGCTGGAGCTCACTCATTGGGAC
CCTGAATTGGCGGTGTCGGCAGCGGAGGTTGCCGAGGAGGAGAATCGAGCGAGGGAAGAA
CAAGAGAGGAATCTGATCATTGACCGGCCACTCAAGTTTAATCGGGTGAAGCTACCACAG
GGGCTGAAATTATCAAGAGGGGAGGCGCGCAGGGTTGCGCAATTCAAGGAAATGCCATAC
ATTTCGCCGTACTCTGACTTCTCGCATCTGCGATCCGGGTCGGCTGAGAAGGAGAAGCAT
GCTTGCGGCGTAGTTCATGAGATTTTGAGCCTGACACTTGAGAAGCGCACGCTGGTGGAT
CATCTGACACACTTCCGGGAGGAATTCCGGTTCTCGCAATCTCTGCGTGGTATGCTAATT
CGCCACCCAGACATGTTTTACGTGTCGCTTAAGGGGGACAGGGACTCGGTCTTCCTCCGT
GAGGCATACAAGAACTCCCAGTTGGTCGAGAAGAGCAAACTCGTGCTGCTTAAGGAGAAG
ATGAGGGCTCTTGTTGCAGTCCCACGCTTCCCTAGAAGGGGTGTGCCGGCAACTAGTGAG
GAGGCTGATAGAACCAATGGAGCTGCGCAAATGCTGAGTGAAGGAAGCGATGTAGAAGAT
GATGAAGACGAGGGATTGTCGGATATGGAAGACTTAATTAGTGAGATTTCTGGTGGCAAA
TCTGACACAGACTACCACTGGGGAGATGGCTGGGTTGGCGAGAATGATGACTCGCCACCA
GACTTCGAAGACGATGATGGCTCAAGTCTTAAAGAAGTCAAGGTGACTATGAAGAAAACT
GCTAATTCTGCCAATGGCAAGGCACATGTTCCTGTTTTTCCTGATGGCAGACCAAGGGAA
CGATGGTAAAATGATCTATTTTAGATTGTTTGGTAGAGTGTGTAATCTTTGTTGTTAGTT
ATTTCATCATATCTAGAAAGTCGCAAAACCCTCAGTCCTTTGAGGTGCTGCTTGAATTTT
GTTACCGAGCACATGAATAGCATATCAGAATTTGAACAGTTCACATGAATCATCACTAAT
ATAGTGAACGAATTTGAAGTTGTGGGGGTTTGTGATCAAGCATACTTGGTGATATAAATA
GGTGCAAACTGTAACAACTTAAGTATAAATACAAGCTTAATTT
clustalw multiple alignements is not computed in this case