cluster # 8842

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Oryza sativa
cluster # 8842 cluster # 8842 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8842#0 length = 1463 sequences # 6
consensusID : consensus_8842#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1463
fasta sequence
                              [AAGCGAAGCCNCAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCC--CTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG-CTGTTCTACG-GCCCGCCTG-GCA-CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAAGTTTAGGTTCT-GGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTC---CATGGAAAGAATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTT-CTTGTTCTGCTTATGGNTNGATGGAACCTTGCATTGGCCTTTTCCCCGCTCTTTAAAAAAAAAAAAAAAACCTCCGGGGGGGG]

[+] EMBL AB045677             [AAGCGAAGCCNCAGCCCACCACTCGCCTCCGCCCTCCGCGCGCGCGAACCCCTCTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCG   GCGG   AAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG CTGTTCTACG GCCCGCCTG GCA CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAAGTTTAGGTTCT GGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTC   CATGGAAAGAATGGTTTTCGGCCTGTCAaaaaaaa                                                                                                    ]
[+] EMBL CB652983             [      AGCCGCAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCC  CTCCCTCGGCGGCGGCGACTACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCATGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATGTCTGTTCTACGAGCCCGCCTGTGCACCCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTATATTCAAGCCTCTTTCAAAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCATAGCGCTGCTCGCGTATTTGGATCTTCTATTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CB677262             [           CAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCC  CTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCACAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG CTGTTCTACG GCCCGCCTG GCA CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[+] EMBL AK103718             [                            CCGCCCTCCGCGCGCGCGAACCC  CTCCCTCGGCGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGATGGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAAGGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGACCTTCCGCACATG CTGTTCTACG GCCCGCCTG GCA CCGGGAAGACCACCACCGCGCTTGCCATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGCTAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGCTGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGATGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTACTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACTTGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGTGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAAGTTTAGGTTCT GGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTC   CATGGAAAGAATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTT CTTGTTCTGCTTAT                                                                     ]
[+] EMBL CA757798             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACTAAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGAGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCCTTTCCAGNTTTANGTTCTGGGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTATGTTTGTGATGNGGATTAAATAATGTGAACTCCACCCTTGTAACCAACTGAATTGTGCACCAGTGTGTCCATCATGGAAAG ATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTTCCTTGTTCTGCTAATGGNTNGATGGAACCTTGCATTGGCCTTTTCCCCGCTCTTTAAAAAAAAAAAAAAAACCTCCGGGGGGGG]
[-] EMBL CB677263             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GAAGAAGTAATGAGCAATCGCATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGTTACACTAAGCACCATCTCTAATGGTGACGTCCGCCGTGCTATAACATATCTTCAGAGCGCTGCTCGCTTATTTGGATCTTGTATTTGTTCTACTGACTTGACTAGTGTTTCAGGGGCTATCCCTGAAGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAAGGAAGTCAATAATATTATTGCAGATGGATACCCTGTTTCACAGTTGATCTCACAGTTTCTAGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAAGCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGTGGATGAGTATTTACAGCTTTTGGATGTGGCTAGTGAGACTATCCGTGCTCTTTTTGACATGCCACAACCGCTGGTCTTCTTAGTGAACATGGATTGGAAAGATGACGCAGGTGGCCATTTATGTGAGGGATATCTTCTGTGTCCTTTCCAAGTTTAGGTTCT GGGGGAAGCTCATTTT                                                                                                                                                                                                                                         ]




>consensus_8842#0
AAGCGAAGCCNCAGCCCGCCACTCGCCTCCGCCCTCCGCGCGCGCGAACCCCTCCCTCGG
CGGCGGCGACGACCAAGGCGGCGGCGGCGGCAGCGGCGCAAGAGGACGCGGTAGCCCGAT
GGCGCCGCTCGTGCCGTCCTCGCAGCCATGGGTGGAGAAATACCGGCCGAGGCAGGTGAA
GGATGTCGCGCACCAGGAGGAGGTGGTCCGGGTGCTCACCACCACCCTCCAGACCGCCGA
CCTTCCGCACATGCTGTTCTACGGCCCGCCTGGCACCGGGAAGACCACCACCGCGCTTGC
CATTGCTTACCAGCTCTACGGTCCAGAGCTCTACAAGTCAAGAGTTCTAGAACTTAATGC
TAGTGATGATCGTGGAATTAATGTGGTGAGGACTAAGATCAAGGACTTTGCTGCTGTTGC
TGTTGGTTCTGCACGAAAAGGCGGTTATCCCTGCCCACCATACAAGATTATTATACTAGA
TGAAGCAGATTCGATGACAGAAGATGCCCAGAATGCTTTAAGGCGTACTATGGAGACTTA
CTCCAAAGTGACAAGATTCTTTTTCATATGCAATTACATCAGCAGGATAATAGAACCACT
TGCATCAAGATGTGCAAAGTTTAGATTCAAGCCTCTTTCAGAAGAAGTAATGAGCAATCG
CATTTTGCATATATGCAATGAAGAAGGGCTCAGTCTTGATGCTCAGGCATTGGCTACACT
AAGCACCATCTCTAATGGTGACCTCCGCCGTGCTATAACCTATCTTCAGAGCGCTGCTCG
CTTATTTGGATCTTCTATTTCTTCTACTGACTTGATTAGTGTTTCAGGGGCTATCCCTGA
AGACGTTGTCAAGTCATTGCTTGCATCTTGCAAATCTGGTGAATTTGATGTGGCAAACAA
GGAAGTCAATAATATTATTGCAGATGGATACCCCGTTTCACAGTTGATCTCACAGTTTCT
AGATGTGATAGTTAATGCCGATGATATTCCAGATGAGCAGAAGGCAAGAATATGTAAAAA
GCTTGGGGAAGCAGATAAGTGCTTGGTCGATGGAGCGGATGAGTATTTACAGCTTTTGGA
TGTGGCTAGTGAGACTATCCGCGCTCTTTTTGACATGCCACAAACGCTGGTCTTCTAAGA
GAACATGGATTGGAAAGATGACGCAGGTGGCCATTTCTGCGAGGGATATCTTCTGTCTCC
TTTCCAAGTTTAGGTTCTGGGGGAAGCTCATTTTCTCGACAGACTGTTGTGCCTTTTTTA
TGTTTGTGATGGGGATTAAATAGTGTGAACTCCACCCTTGTAACCAACTGAATTGTGCAC
CAGTGTGTCCATGGAAAGAATGGTTTTCGGCCTGTCATCTTGTACATCATGCATCATTTT
CTTGTTCTGCTTATGGNTNGATGGAACCTTGCATTGGCCTTTTCCCCGCTCTTTAAAAAA
AAAAAAAAAACCTCCGGGGGGGG
clustalw multiple alignements is not computed in this case