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Oryza sativa
cluster # 8851 cluster # 8851       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8851#0 length = 1877 sequences # 4  
consensus_8851#1 length = 738 sequences # 1  
consensus_8851#2 length = 674 sequences # 1  

consensusID : consensus_8851#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1877
fasta sequence
                              [GCGTATACTAATCGTCCTCCGGTAGTAGTAGCAGTAGTACGCTCGGTTCGTGGAACCCCACTCTCCAATCCCCAAAAGCATCCACCCCACGGCGCGAGATCCCAACTGCGGCCGCGGGATTCTTCGGAGGAGTGGTGATCGCCATCGGGGTATGGAGGCGGCGGCGAAGCTGAAGAGGAGCATATCGCGGCAGCTGTCGTCGGGGGCGGCGAGGGTGTGGCGGCAGCTGTCGCTGGAGCCGGTGTACACTCCGCGGCGGGCGGGGGCGGTGGGCGGTGGTGGTGGAGGAGGTGGAGGAGGGGGAGGGGGAGGGGGAGGGGCGAGGCCGACGAGGTTCGGGCTCGCGAGGCAGTCGTCGCTCGACCCGACGCCGCGGGAGGGGGGCGGGGCGGCGGAGGATGGGTCGGGGGCGGCGGCGATGCTGGCCGTGCCGGAGAACCTGGACGCGACGATGCGGCTGCTGTTCGCGGCGTGCCAGGGGGACGTGGCCGGGGTGGAGGAGCTGCTCAGGGACGGGGTGGACGTCGACAGCATTGACCTCGACGGGCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAGGGGGAGGTGGTGCGCCTGCTGCTCAGCTGGAAGGCCAACATGAACGCCCGCGACCGCTGGGGCAGCACGCCAGCGGCAGACGCGAAGCATTACGGGCACTTTGAAGTTTACAACCTTCTGAGAGCAAGAGGAGCAAAAACTCCGAAACAAAAGAAGACCCCGATGACAGTTTCAAATCCCAAAGAAGTTCCGGAGTATGAGCTGAACCCACTTGAACTCGAGTTCAGAAGAGGAGAGGAAGTTACAAAGGGTCACTATGTTGCCAGGTGGTATGGATCCAAAGTGTTTGTTAAGATACTTGACAAAGACAGCTTCTCAGACGCCAATAGCATAAATGAATTTAAACACGAGCTTACTTTACTGGAGAAGGCCCGCCATCCAAATTTGGTCCAATTTGTGGGAGCTGTTACACAAAATGTACCAATGATGATTGTTTCAGAGTATCATCAAAAGGGTGATTTAGCCAGTTATCTTGAAACAAAAGGTCGCTTGCAGCCTTACAAAGCTATCAGATTTTCCCTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTGCAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAAAAGCATTGTGCGGGATGATGAAGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAATCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACACCGCTCCTGAGATGTACAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTCCACCCAAAACCACCGGAGGAGGCGGCGAAAATGATTTGTTTGGAGGGTATGAGACCACCGTTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGGGATCCAACACCTTCGGTCAGGCCGACGTTCGAAGAGATAATCGTACGCCTGAACAAGATATCCACGAGTTTTACTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAAACACGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCCGCTTTTACTTTCTTATGAATTATATCATTTTTAACTGGAATAATGTGTTAATTTTCTGAACGTTCAACGCTGCTCGCAA]

[+] EMBL AK099756             [GCGTATACTAATCGTCCTCCGGTAGTAGTAGCAGTAGTACGCTCGGTTCGTGGAACCCCACTCTCCAATCCCCAAAAGCATCCACCCCACGGCGCGAGATCCCAACTGCGGCCGCGGGATTCTTCGGAGGAGTGGTGATCGCCATCGGGGTATGGAGGCGGCGGCGAAGCTGAAGAGGAGCATATCGCGGCAGCTGTCGTCGGGGGCGGCGAGGGTGTGGCGGCAGCTGTCGCTGGAGCCGGTGTACACTCCGCGGCGGGCGGGGGCGGTGGGCGGTGGTGGTGGAGGAGGTGGAGGAGGGGGAGGGGGAGGGGGAGGGGCGAGGCCGACGAGGTTCGGGCTCGCGAGGCAGTCGTCGCTCGACCCGACGCCGCGGGAGGGGGGCGGGGCGGCGGAGGATGGGTCGGGGGCGGCGGCGATGCTGGCCGTGCCGGAGAACCTGGACGCGACGATGCGGCTGCTGTTCGCGGCGTGCCAGGGGGACGTGGCCGGGGTGGAGGAGCTGCTCAGGGACGGGGTGGACGTCGACAGCATTGACCTCGACGGGCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAGGGGGAGGTGGTGCGCCTGCTGCTCAGCTGGAAGGCCAACATGAACGCCCGCGACCGCTGGGGCAGCACGCCAGCGGCAGACGCGAAGCATTACGGGCACTTTGAAGTTTACAACCTTCTGAGAGCAAGAGGAGCAAAAACTCCGAAACAAAAGAAGACCCCGATGACAGTTTCAAATCCCAAAGAAGTTCCGGAGTATGAGCTGAACCCACTTGAACTCGAGTTCAGAAGAGGAGAGGAAGTTACAAAGGGTCACTATGTTGCCAGGTGGTATGGATCCAAAGTGTTTGTTAAGATACTTGACAAAGACAGCTTCTCAGACGCCAATAGCATAAATGAATTTAAACACGAGCTTACTTTACTGGAGAAGGCCCGCCATCCAAATTTGGTCCAATTTGTGGGAGCTGTTACACAAAATGTACCAATGATGATTGTTTCAGAGTATCATCAAAAGGGTGATTTAGCCAGTTATCTTGAAACAAAAGGTCGCTTGCAGCCTTACAAAGCTATCAGATTTTCCCTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTGCAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAAAAGCATTGTGCGGGATGATGAAGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAATCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACACCGCTCCTGAGATGTACAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTCCACCCAAAACCACCGGAGGAGGCGGCGAAAATGATTTGTTTGGAGGGTATGAGACCACCGTTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGGGATCCAACACCTTCGGTCAGGCCGACGTTCGAAGAGATAATCGTACGCCTGAACAAGATATCCACGAGTTTTACTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAAACACGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCCGCTTTTACTTTCTTATGAATTATATCATTTTTAACTGGA                                        ]
[+] EMBL CB658770             [                                                                                                                                                                                                                                                                                                                                      CGACCATGTTCGGGCTCGCGAGGCAGTCGTCGCTCGACCCGACGCCGCGGGAGGGGGGCGGGGCGGCGGAGGATGGGTCGGGGGCGGCGGCGATGCTGGCCGTGCCGGAGAACCTGGACGCGACGATGCGGCTGCTGTTCGCGGCGTGCCAGGGGGACGTGGCCGGGGTGGAGGAGCTGCTCAGGGACGGGGTGGACGTCGACAGCATTGACCTCGACGGGCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAGGGGGAGGTGGTGCGCCTGCTGCTCAGCTGGAAGGCCAACATGAACGCCCGCGACCGCTGGGGCAGCACGCCAGCGGCAGACGCGAAGCATTACGGGCACTTTGAAGTTTACAACCTTCTGAGAGCAAGAGGAGCAAAAACTCCGAAACAAAAGAAGACCCCGATGACAGTTTCAAATCCCAAAGAAGTTCCGGAGTATGAGCTGAACCCACTTGAACTCGAGTTCAGAAGAGGAGAGGAAGTTACAAAGGGTCACTATGTTGCCAGGTGGTATGGATCCAAAGTGTTTGTTAAGATACTTGACAAAGACAGCTTCTCAGACGCCAATAGCATAAATGAATTTAAACACGAGCTTACTTTACTGGAGAAGGCCCGCCATCCAAATTTGGTCCAATTTGTGGGAGCTGTTACACAAAATGTACCCATGATGATTGTTTCAGAGTATCATCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AK071922             [                                                                                                                                                                                                                                                                                                                                                                                                               TGGGTCGGGGGCGGCGGCGATGCTGGCCGTGCCGGAGAACCTGGACGCGACGATGCGGCTGCTGTTCGCGGCGTGCCAGGGGGACGTGGCCGGGGTGGAGGAGCTGCTCAGGGACGGGGTGGACGTCGACAGCATTGACCTCGACGGGCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAGGGGGAGGTGGTGCGCCTGCTGCTCAGCTGGAAGGCCAACATGAACGCCCGCGACCGCTGGGGCAGCACGCCAGCGGCAGACGCGAAGCATTACGGGCACTTTGAAGTTTACAACCTTCTGAGAGCAAGAGGAGCAAAAACTCCGAAACAAAAGAAGACCCCGATGACAGTTTCAAATCCCAAAGAAGTTCCGGAGTATGAGCTGAACCCACTTGAACTCGAGTTCAGAAGAGGAGAGGAAGTTACAAAGGGTCACTATGTTGCCAGGTGGTATGGATCCAAAGTGTTTGTTAAGATACTTGACAAAGACAGCTTCTCAGACGCCAATAGCATAAATGAATTTAAACACGAGCTTACTTTACTGGAGAAGGCCCGCCATCCAAATTTGGTCCAATTTGTGGGAGCTGTTACACAAAATGTACCAATGATGATTGTTTCAGAGTATCATCAAAAGGGTGATTTAGCCAGTTATCTTGAAACAAAAGGTCGCTTGCAGCCTTACAAAGCTATCAGATTTTCCCTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTGCAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAAAAGCATTGTGAGGGATGATGAAGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAATCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACACCGCTCCTGAGATGTACAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTCCACCCAAAACCACCGGAGGAGGCGGCGAAAATGATTTGTTTGGAGGGTATGAGACCACCGTTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGGGATCCAACACCTTCGGTCAGGCCGACGTTCGAAGAGATAATCGTACGCCTGAACAAGATATCCACGAGTTTTACTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAAACACGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCCGCTTTTACTTTCTTATGAATTATATCATTTTTAACTGGAATAATGTGTTAATTTTCTGAACGTTCAACGCTGCTCGCAA]
[+] EMBL CB000654             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTCCACCCAAAACCACCGGAGGAGGCGGCGAAAATGATTTGTTTGGAGGGTATGAGACCACCGTTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGGGATCCAACACCTTCGGTCAGGCCGACGTTCGAAGAGATAATCGTACGCCTGAACAAGATATCCACGAGTTTTACTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAAACACGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCCGCTTTTACTTTCTTATGAATT                                                          ]


>consensus_8851#0 GCGTATACTAATCGTCCTCCGGTAGTAGTAGCAGTAGTACGCTCGGTTCGTGGAACCCCA CTCTCCAATCCCCAAAAGCATCCACCCCACGGCGCGAGATCCCAACTGCGGCCGCGGGAT TCTTCGGAGGAGTGGTGATCGCCATCGGGGTATGGAGGCGGCGGCGAAGCTGAAGAGGAG CATATCGCGGCAGCTGTCGTCGGGGGCGGCGAGGGTGTGGCGGCAGCTGTCGCTGGAGCC GGTGTACACTCCGCGGCGGGCGGGGGCGGTGGGCGGTGGTGGTGGAGGAGGTGGAGGAGG GGGAGGGGGAGGGGGAGGGGCGAGGCCGACGAGGTTCGGGCTCGCGAGGCAGTCGTCGCT CGACCCGACGCCGCGGGAGGGGGGCGGGGCGGCGGAGGATGGGTCGGGGGCGGCGGCGAT GCTGGCCGTGCCGGAGAACCTGGACGCGACGATGCGGCTGCTGTTCGCGGCGTGCCAGGG GGACGTGGCCGGGGTGGAGGAGCTGCTCAGGGACGGGGTGGACGTCGACAGCATTGACCT CGACGGGCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAGGGGGAGGTGGTGCGCCT GCTGCTCAGCTGGAAGGCCAACATGAACGCCCGCGACCGCTGGGGCAGCACGCCAGCGGC AGACGCGAAGCATTACGGGCACTTTGAAGTTTACAACCTTCTGAGAGCAAGAGGAGCAAA AACTCCGAAACAAAAGAAGACCCCGATGACAGTTTCAAATCCCAAAGAAGTTCCGGAGTA TGAGCTGAACCCACTTGAACTCGAGTTCAGAAGAGGAGAGGAAGTTACAAAGGGTCACTA TGTTGCCAGGTGGTATGGATCCAAAGTGTTTGTTAAGATACTTGACAAAGACAGCTTCTC AGACGCCAATAGCATAAATGAATTTAAACACGAGCTTACTTTACTGGAGAAGGCCCGCCA TCCAAATTTGGTCCAATTTGTGGGAGCTGTTACACAAAATGTACCAATGATGATTGTTTC AGAGTATCATCAAAAGGGTGATTTAGCCAGTTATCTTGAAACAAAAGGTCGCTTGCAGCC TTACAAAGCTATCAGATTTTCCCTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTG CAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAAAAGCATTGTGCGGGATGATGA AGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAA TCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACACCGCTCCTGAGATGTA CAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGA GATGATTGAAGGAACTCATGCTTTCCACCCAAAACCACCGGAGGAGGCGGCGAAAATGAT TTGTTTGGAGGGTATGAGACCACCGTTCAAGAACAAACCCAAATACTATCCTGATGATTT GAGAGAGCTTATACAGGAGTGCTGGGATCCAACACCTTCGGTCAGGCCGACGTTCGAAGA GATAATCGTACGCCTGAACAAGATATCCACGAGTTTTACTAAGCAGACTCGGTGGAGAGA CACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTT CCGCCCTTTTTGCATATGTGAGTAAACACGGTGAAAATTGTATCGAGTTGTCGAGGAGAT AGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCCGC TTTTACTTTCTTATGAATTATATCATTTTTAACTGGAATAATGTGTTAATTTTCTGAACG TTCAACGCTGCTCGCAA



consensusID : consensus_8851#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 738
fasta sequence
                              [CTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTGCAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAACATTGTGCGGGATGATGAAGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAATCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACCCCGCTCCTGAGATGTACAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTCCCCCCAAAACCCCCGGAGGAGGCGGGGAAAATGATTTGTTTGGAGGGTATGAGACCCCCGTTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGGGATCCAACCCCTTCGGTCAGGCCGACGTTTGAAGAGATAATCGTACCCCTGAACAAGATATCCCCGAGTTTTATTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAAACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACTTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCACGGTTTTACTTTCTAAAAAAAAAAAAAAAAAAAAACCTAAAAGGA]

[-] EMBL CB658771             [CTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTGCAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAACATTGTGCGGGATGATGAAGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAATCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACCCCGCTCCTGAGATGTACAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTCCCCCCAAAACCCCCGGAGGAGGCGGGGAAAATGATTTGTTTGGAGGGTATGAGACCCCCGTTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGGGATCCAACCCCTTCGGTCAGGCCGACGTTTGAAGAGATAATCGTACCCCTGAACAAGATATCCCCGAGTTTTATTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAAACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACTTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCACGGTTTTACTTTCTAAAAAAAAAAAAAAAAAAAAACCTAAAAGGA]


>consensus_8851#1 CTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTGCAAGCCAGAGCCAATCATCCAT GGCAATCTGTCAACAAACATTGTGCGGGATGATGAAGGGAAACTTAAAGTGGCAGGCTTT GGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAATCCACAAATGGATCAGACGACATCA AAATTTAACAGTGTATACCCCGCTCCTGAGATGTACAGAAATGGAACGTTTGACAGAAGT GTAGATGTATTTGCATTTGGTCTCATTCTTTATGAGATGATTGAAGGAACTCATGCTTTC CCCCCAAAACCCCCGGAGGAGGCGGGGAAAATGATTTGTTTGGAGGGTATGAGACCCCCG TTCAAGAACAAACCCAAATACTATCCTGATGATTTGAGAGAGCTTATACAGGAGTGCTGG GATCCAACCCCTTCGGTCAGGCCGACGTTTGAAGAGATAATCGTACCCCTGAACAAGATA TCCCCGAGTTTTATTAAGCAGACTCGGTGGAGAGACACTTTTAAGTTACCATGGAAACAA GCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTTCCGCCCTTTTTGCATATGTGAGTAA ACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACTTTTTTGTA TTTCCAAAAAATATTTGTAACTATAATCAGCCACGGTTTTACTTTCTAAAAAAAAAAAAA AAAAAAAACCTAAAAGGA



consensusID : consensus_8851#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 674
fasta sequence
                              [AGCATTGTGTGGGATGTTGAAGGGAAACTTAAAGTGGCGGGCTTTGGCTCACGTAGTTTGATTAAAGTCTTCGAAGATAATCCACGAATGGCTCAATCGCCATCAAAATTTAGCAGTGTTTTCACCGGTCCTGAGAGGGACAGAAATGGAACGTTTGACAGAAGGGTAGATGTATTTGCACTTGGTCTCATTCCTTTTTAGATGAGTGAAGGAACTCATGCTTTCCACCCAAAACCACTGGAGGAGGCGGTGAAAATGATTTGTTTGGAGGGTATTAGTCCCCCGTTCAAGAACAAACCCAAAAACTATCTTGATGGTTTGAGAGAGGTTATACCGGAGTGGTGGGATTCAACACCTTTGGTCAGGCCGCCGTTTGAAGAGATAATTGTTTGCCTGAACAAGATATCCCCTAGTTTTTCTAAGCAGACTTGGTGGAGAGACCCTTTTAAGTTGCCATGGAAACAAGGTTTAAAAAGATAGTCTGGTTTCCGTCAAGATTTCCGCCCCTTTAGGATATGTGGGTAAACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAAACCGCTTTTACTTTTTTATGAATTATATCATTTTTATCTGGAAAAAAAAAAAAAAAAAA]

[-] EMBL CA759495             [AGCATTGTGTGGGATGTTGAAGGGAAACTTAAAGTGGCGGGCTTTGGCTCACGTAGTTTGATTAAAGTCTTCGAAGATAATCCACGAATGGCTCAATCGCCATCAAAATTTAGCAGTGTTTTCACCGGTCCTGAGAGGGACAGAAATGGAACGTTTGACAGAAGGGTAGATGTATTTGCACTTGGTCTCATTCCTTTTTAGATGAGTGAAGGAACTCATGCTTTCCACCCAAAACCACTGGAGGAGGCGGTGAAAATGATTTGTTTGGAGGGTATTAGTCCCCCGTTCAAGAACAAACCCAAAAACTATCTTGATGGTTTGAGAGAGGTTATACCGGAGTGGTGGGATTCAACACCTTTGGTCAGGCCGCCGTTTGAAGAGATAATTGTTTGCCTGAACAAGATATCCCCTAGTTTTTCTAAGCAGACTTGGTGGAGAGACCCTTTTAAGTTGCCATGGAAACAAGGTTTAAAAAGATAGTCTGGTTTCCGTCAAGATTTCCGCCCCTTTAGGATATGTGGGTAAACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAAACCGCTTTTACTTTTTTATGAATTATATCATTTTTATCTGGAAAAAAAAAAAAAAAAAA]


>consensus_8851#2 AGCATTGTGTGGGATGTTGAAGGGAAACTTAAAGTGGCGGGCTTTGGCTCACGTAGTTTG ATTAAAGTCTTCGAAGATAATCCACGAATGGCTCAATCGCCATCAAAATTTAGCAGTGTT TTCACCGGTCCTGAGAGGGACAGAAATGGAACGTTTGACAGAAGGGTAGATGTATTTGCA CTTGGTCTCATTCCTTTTTAGATGAGTGAAGGAACTCATGCTTTCCACCCAAAACCACTG GAGGAGGCGGTGAAAATGATTTGTTTGGAGGGTATTAGTCCCCCGTTCAAGAACAAACCC AAAAACTATCTTGATGGTTTGAGAGAGGTTATACCGGAGTGGTGGGATTCAACACCTTTG GTCAGGCCGCCGTTTGAAGAGATAATTGTTTGCCTGAACAAGATATCCCCTAGTTTTTCT AAGCAGACTTGGTGGAGAGACCCTTTTAAGTTGCCATGGAAACAAGGTTTAAAAAGATAG TCTGGTTTCCGTCAAGATTTCCGCCCCTTTAGGATATGTGGGTAAACCCGGTGAAAATTG TATCGAGTTGTCGAGGAGATAGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATT TGTAACTATAATCAAACCGCTTTTACTTTTTTATGAATTATATCATTTTTATCTGGAAAA AAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8851#0      GCGTATACTAATCGTCCTCCGGTAGTAGTAGCAGTAGTACGCTCGGTTCGTGGAACCCCA 60
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      CTCTCCAATCCCCAAAAGCATCCACCCCACGGCGCGAGATCCCAACTGCGGCCGCGGGAT 120
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      TCTTCGGAGGAGTGGTGATCGCCATCGGGGTATGGAGGCGGCGGCGAAGCTGAAGAGGAG 180
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      CATATCGCGGCAGCTGTCGTCGGGGGCGGCGAGGGTGTGGCGGCAGCTGTCGCTGGAGCC 240
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      GGTGTACACTCCGCGGCGGGCGGGGGCGGTGGGCGGTGGTGGTGGAGGAGGTGGAGGAGG 300
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      GGGAGGGGGAGGGGGAGGGGCGAGGCCGACGAGGTTCGGGCTCGCGAGGCAGTCGTCGCT 360
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      CGACCCGACGCCGCGGGAGGGGGGCGGGGCGGCGGAGGATGGGTCGGGGGCGGCGGCGAT 420
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      GCTGGCCGTGCCGGAGAACCTGGACGCGACGATGCGGCTGCTGTTCGCGGCGTGCCAGGG 480
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      GGACGTGGCCGGGGTGGAGGAGCTGCTCAGGGACGGGGTGGACGTCGACAGCATTGACCT 540
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      CGACGGGCGCACGGCGATGCACATCGCCGCCTGCGAGGGGCAGGGGGAGGTGGTGCGCCT 600
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      GCTGCTCAGCTGGAAGGCCAACATGAACGCCCGCGACCGCTGGGGCAGCACGCCAGCGGC 660
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      AGACGCGAAGCATTACGGGCACTTTGAAGTTTACAACCTTCTGAGAGCAAGAGGAGCAAA 720
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      AACTCCGAAACAAAAGAAGACCCCGATGACAGTTTCAAATCCCAAAGAAGTTCCGGAGTA 780
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      TGAGCTGAACCCACTTGAACTCGAGTTCAGAAGAGGAGAGGAAGTTACAAAGGGTCACTA 840
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      TGTTGCCAGGTGGTATGGATCCAAAGTGTTTGTTAAGATACTTGACAAAGACAGCTTCTC 900
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      AGACGCCAATAGCATAAATGAATTTAAACACGAGCTTACTTTACTGGAGAAGGCCCGCCA 960
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      TCCAAATTTGGTCCAATTTGTGGGAGCTGTTACACAAAATGTACCAATGATGATTGTTTC 1020
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      AGAGTATCATCAAAAGGGTGATTTAGCCAGTTATCTTGAAACAAAAGGTCGCTTGCAGCC 1080
consensus_8851#1      ------------------------------------------------------------
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      TTACAAAGCTATCAGATTTTCCCTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTG 1140
consensus_8851#1      ----------------------CTTGACATTGCGAGGGGATTAAATTATCTCCACGAGTG 38
consensus_8851#2      ------------------------------------------------------------
                                                                                  

consensus_8851#0      CAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAAAAGCATTGTGCGGGATGATGA 1200
consensus_8851#1      CAAGCCAGAGCCAATCATCCATGGCAATCTGTCAACAAA---CATTGTGCGGGATGATGA 95
consensus_8851#2      ----------------------------------------AGCATTGTGTGGGATGTTGA 20
                                                                ******* ****** ***

consensus_8851#0      AGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAA 1260
consensus_8851#1      AGGGAAACTTAAAGTGGCAGGCTTTGGCTCACGTAGTCTGATTAAAGTCTCAGAAGATAA 155
consensus_8851#2      AGGGAAACTTAAAGTGGCGGGCTTTGGCTCACGTAGTTTGATTAAAGTCTTCGAAGATAA 80
                      ****************** ****************** ************  ********

consensus_8851#0      TCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACACCGCTCCTGAGATGTA 1320
consensus_8851#1      TCCACAAATGGATCAGACGACATCAAAATTTAACAGTGTATACCCCGCTCCTGAGATGTA 215
consensus_8851#2      TCCACGAATGGCTCAATCGCCATCAAAATTTAGCAGTGTTTTCACCGGTCCTGAGAGGGA 140
                      ***** ***** ***  ** ************ ****** * * *** ******** * *

consensus_8851#0      CAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGA 1380
consensus_8851#1      CAGAAATGGAACGTTTGACAGAAGTGTAGATGTATTTGCATTTGGTCTCATTCTTTATGA 275
consensus_8851#2      CAGAAATGGAACGTTTGACAGAAGGGTAGATGTATTTGCACTTGGTCTCATTCCTTTTTA 200
                      ************************ *************** ************ ** * *

consensus_8851#0      GATGATTGAAGGAACTCATGCTTTCCACCCAAAACCACCGGAGGAGGCGGCGAAAATGAT 1440
consensus_8851#1      GATGATTGAAGGAACTCATGCTTTCCCCCCAAAACCCCCGGAGGAGGCGGGGAAAATGAT 335
consensus_8851#2      GATGAGTGAAGGAACTCATGCTTTCCACCCAAAACCACTGGAGGAGGCGGTGAAAATGAT 260
                      ***** ******************** ********* * *********** *********

consensus_8851#0      TTGTTTGGAGGGTATGAGACCACCGTTCAAGAACAAACCCAAATACTATCCTGATGATTT 1500
consensus_8851#1      TTGTTTGGAGGGTATGAGACCCCCGTTCAAGAACAAACCCAAATACTATCCTGATGATTT 395
consensus_8851#2      TTGTTTGGAGGGTATTAGTCCCCCGTTCAAGAACAAACCCAAAAACTATCTTGATGGTTT 320
                      *************** ** ** ********************* ****** ***** ***

consensus_8851#0      GAGAGAGCTTATACAGGAGTGCTGGGATCCAACACCTTCGGTCAGGCCGACGTTCGAAGA 1560
consensus_8851#1      GAGAGAGCTTATACAGGAGTGCTGGGATCCAACCCCTTCGGTCAGGCCGACGTTTGAAGA 455
consensus_8851#2      GAGAGAGGTTATACCGGAGTGGTGGGATTCAACACCTTTGGTCAGGCCGCCGTTTGAAGA 380
                      ******* ****** ****** ****** **** **** ********** **** *****

consensus_8851#0      GATAATCGTACGCCTGAACAAGATATCCACGAGTTTTACTAAGCAGACTCGGTGGAGAGA 1620
consensus_8851#1      GATAATCGTACCCCTGAACAAGATATCCCCGAGTTTTATTAAGCAGACTCGGTGGAGAGA 515
consensus_8851#2      GATAATTGTTTGCCTGAACAAGATATCCCCTAGTTTTTCTAAGCAGACTTGGTGGAGAGA 440
                      ****** **   **************** * ******  ********** **********

consensus_8851#0      CACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTT 1680
consensus_8851#1      CACTTTTAAGTTACCATGGAAACAAGCTTCAGAGAGATAGCCTGGTTGCCGTCAAGATTT 575
consensus_8851#2      CCCTTTTAAGTTGCCATGGAAACAAGGTTTAAAAAGATAGTCTGGTTTCCGTCAAGATTT 500
                      * ********** ************* ** * * ****** ****** ************

consensus_8851#0      CCGCCCTTTTTGCATATGTGAGTAAACACGGTGAAAATTGTATCGAGTTGTCGAGGAGAT 1740
consensus_8851#1      CCGCCCTTTTTGCATATGTGAGTAAACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGAT 635
consensus_8851#2      CCGCCCCTTTAGGATATGTGGGTAAACCCGGTGAAAATTGTATCGAGTTGTCGAGGAGAT 560
                      ****** *** * ******* ****** ********************************

consensus_8851#0      AGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCC-CG 1799
consensus_8851#1      AGTGGTCATTTTTCACTTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAGCCACG 695
consensus_8851#2      AGTGGTCATTTTTCACGTTTTTGTATTTCCAAAAAATATTTGTAACTATAATCAAAC-CG 619
                      **************** *************************************  * **

consensus_8851#0      CTTTTACTTTCTTATGAATTATATCATTTTTAACTGGAATAATGTGTTAATTTTCTGAAC 1859
consensus_8851#1      GTTTTACTTTCTAAAAAAAAAAAAAAAAAAAAACCTAAAAGGA----------------- 738
consensus_8851#2      CTTTTACTTTTTTATGAATTATATCATTTTTATCTGGAAAAAAAAAAAAAAAAAA----- 674
                       ********* * *  **  * *  *     * *   **                     

consensus_8851#0      GTTCAACGCTGCTCGCAA 1877
consensus_8851#1      ------------------
consensus_8851#2      ------------------
                                        




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)