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Oryza sativa
cluster # 8853 cluster # 8853       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8853#0 length = 2080 sequences # 5  
consensus_8853#1 length = 673 sequences # 1  

consensusID : consensus_8853#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2080
fasta sequence
                              [AATTTATTTCAAATAAAACCAAAAAATGCCCAAAACGGCAACTCCGATGCTTCTCCAGCCCATCTCCGGCGCCGGCGCCGGCGCTCGCCGGAGCTCCGCCGAGGGACTCTCCCCTCCTCCTACCGCTCGCCTCCGCCGCCGCGTCCTCTGCGCGATCCGCGCCGACGCGCCGCCCCCGATCCACCTCTCCGCGGCGGCCCCCTCGCGGCCGGCGAAGCCGCCCGTCTGCACCGCCGACGAGCTCCACCACGCGCCCGTCTCCGGCGCCGGGTGGCGTCTCGCGCTCTGGCGGTACAGGCCGCCGCCTCATGCGCCGGCGAGGAACCACCCGCTGATGCTTCTGTCGGGAGTCGGGACGAACGCCATCGGGTTCGATCTCTCCCCCGGGGCCTCATTCGCCCGTCACATGTCTAACCAGGGATTTGATACATGGATTGTCGAAGTGAGAGGTTCTGGTCTGAGCATACGTGATCATGATAATTCTGCTTCATCTCCATCAGGCGCTTTCGATGATATATCTAATGGCACATTGGCTCTTGATAAATCAAGCACATTGGAGGTTGCTTCAGTTCAAAGTTCTGGTTTCTCTGGTATTGATTATGATGACCTTGGAATAGTTGCGTTGGATGACCCACCTTTACTGATGGAGATGACTAGTTTCTTTGATCGAATTTCAAAACTTCTGGAAGAGGCTAGTTTAAATAAAAATTTTCATGAGATCACAGATAAGATTTCGGTTCTATCTGAAATGGTAGAAAGCTCTGCCGTTATTGGTCCAATGAGAGAAGAAAGTCTGCGTCTTCTGAAGAACTTTCAAGAGCAGATTGACTCATGGGAACACTTTGTGGCAACTCAGATGAATCTAAATTCTGAATATAATTGGGACTTCGACCATTACTTGGAGGAGGATATACCTACTGCGGTGGAATATATTAGACAACATAGTAGAGTAAAAGATGGGAAGCTGCTTGCCATTGGACACTCAATGGGAGGAATTTTGTTATATGCAATGCTGTCAAAATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGTTGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTCATCCTGCGCAAGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGCATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAATATCAGCACAGGATATGATGCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATGATACAATATATGTTCACCTCAGATGG-TTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGCCATGTGACATGGCCAGCTGCGCAAAATATA-GGTAAACCCACAGAACTCGTAGGATGTATCCTTGTAAACAGGTGTACCATGCGTCAGTGCACCACTTGTTATACAAAACCTATAAATATAGGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAACTCATTCTTTGACCTTGTTTCCTTAGTTGATGTTGATCCTTCAAATACTTGGCTTCTGTTGTTGTAACAAAATGAAATGGACTGATATGTACTGGGATATACTGTTGGCATGTAGCGCTGTCTGCATTTGTAATGAACAGTTCTGGAGGTAATGGAATGC]

[+] EMBL AK071671             [AATTTATTTCAAATAAAACCAAAAAATGCCCAAAACGGCAACTCCGATGCTTCTCCAGCCCATCTCCGGCGCCGGCGCCGGCGCTCGCCGGAGCTCCGCCGAGGGACTCTCCCCTCCTCCTACCGCTCGCCTCCGCCGCCGCGTCCTCTGCGCGATCCGCGCCGACGCGCCGCCCCCGATCCACCTCTCCGCGGCGGCCCCCTCGCGGCCGGCGAAGCCGCCCGTCTGCACCGCCGACGAGCTCCACCACGCGCCCGTCTCCGGCGCCGGGTGGCGTCTCGCGCTCTGGCGGTACAGGCCGCCGCCTCATGCGCCGGCGAGGAACCACCCGCTGATGCTTCTGTCGGGAGTCGGGACGAACGCCATCGGGTTCGATCTCTCCCCCGGGGCCTCATTCGCCCGTCACATGTCTAACCAGGGATTTGATACATGGATTGTCGAAGTGAGAGGTTCTGGTCTGAGCATACGTGATCATGATAATTCTGCTTCATCTCCATCAGGCGCTTTCGATGATATATCTAATGGCACATTGGCTCTTGATAAATCAAGCACATTGGAGGTTGCTTCAGTTCAAAGTTCTGGTTTCTCTGGTATTGATTATGATGACCTTGGAATAGTTGCGTTGGATGACCCACCTTTACTGATGGAGATGACTAGTTTCTTTGATCGAATTTCAAAACTTCTGGAAGAGGCTAGTTTAAATAAAAATTTTCATGAGATCACAGATAAGATTTCGGTTCTATCTGAAATGGTAGAAAGCTCTGCCGTTATTGGTCCAATGAGAGAAGAAAGTCTGCGTCTTCTGAAGAACTTTCAAGAGCAGATTGACTCATGGGAACACTTTGTGGCAACTCAGATGAATCTAAATTCTGAATATAATTGGGACTTCGACCATTACTTGGAGGAGGATATACCTACTGCGGTGGAATATATTAGACAACATAGTAGAGTAAAAGATGGGAAGCTGCTTGCCATTGGACACTCAATGGGAGGAATTTTGTTATATGCAATGCTGTCAAAATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGTTGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTCATCCTGCGCAAGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGCATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAATATCAGCACAGGATATGATGCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATGATACAATATATGTTCACCTCAGATGG TTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGCCATGTGACATGGCCAGCTGCGCAAAATATA GGTAAACCCACAGAACTCGTAGGATGTATCCTTGTAAACAGGTGTACCATGCGTCAGTGCACCACTTGTTATACAAAACCTATAAATATAGGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAACTCATTCTTTGACCTTGTTTCCTTAGTTGATGTTGATCCTTCAAATACTTGGCTTCTGTTGTTGTAACAAAATGAAATGGACTGATATGTACTGGGATA                                                             ]
[+] EMBL AK099989             [                                                     TCCAGCCCATCTCCGGCGCCGGCGCCGGCGCTCGCCGGAGCTCCGCCGAGGGACTCTCCCCTCCTCCTACCGCTCGCCTCCGCCGCCGCGTCCTCTGCGCGATCCGCGCCGACGCGCCGCCCCCGATCCACCTCTCCGCGGCGGCCCCCTCGCGGCCGGCGAAGCCGCCCGTCTGCACCGCCGACGAGCTCCACCACGCGCCCGTCTCCGGCGCCGGGTGGCGTCTCGCGCTCTGGCGGTACAGGCCGCCGCCTCATGCGCCGGCGAGGAACCACCCGCTGATGCTTCTGTCGGGAGTCGGGACGAACGCCATCGGGTTCGATCTCTCCCCCGGGGCCTCATTCGCCCGTCACATGTCTAACCAGGGATTTGATACATGGATTGTCGAAGTGAGAGGTTCTGGTCTGAGCATACGTGATCATGATAATTCTGCTTCATCTCCATCAGGCGCTTTCGATGATATATCTAATGGCACATTGGCTCTTGATAAATCAAGCACATTGGAGGTTGCTTCAGTTCAAAGTTCTGGTTTCTCTGGTATTGATTATGATGACCTTGGAATAGTTGCGTTGGATGACCCACCTTTACTGATGGAGATGACTAGTTTCTTTGATCGAATTTCAAAACTTCTGGAAGAGGCTAGTTTAAATAAAAATTTTCATGAGATCACAGATAAGATTTCGGTTCTATCTGAAATGGTAGAAAGCTCTGCCGTTATTGGTCCAATGAGAGAAGAAAGTCTGCGTCTTCTGAAGAACTTTCAAGAGCAGATTGACTCATGGGAACACTTTGTGGCAACTCAGATGAATCTAAATTCTGAATATAATTGGGACTTCGACCATTACTTGGAGGAGGATATACCTACTGCGGTGGAATATATTAGACAACATAGTAGAGTAAAAGATGGGAAGCTGCTTGCCATTGGACACTCAATGGGAGGAATTTTGTTATATGCAATGCTGTCAAAATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGTTGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTCATCCTGCGCAAGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGCATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAATATCAGCACAGGATATGATGCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATGATACAATATATGTTCACCTCAGATGG TTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGCCATGTGACATGGCCAGCTGCGCAAAATATA GGTAAACCCACAGAACTCGTAGGATGTATCCTTGTAAACAGGTGTACCATGCGTCAGTGCACCACTTGTTATACAAAACCTATAAATATAGGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAACTCATTCTTTGACCTTGTTTCCTTAGTTGATGTTGATCCTTCAAATACTTGGCTTCTGTTGTTGTAACAAAATGAAATGGACTGATATGTACTGGGATATACTGTTGGCATGTAGCGCTGTCTGCATTTGTAATGAACAGTTCTGGAGGTAATGGAATGC]
[+] EMBL CA766975             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gacgagaCAAGGGGAGGAATTTTGTTATATGCAATGCTGTCAAAATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGTTGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTTATCCTGCGCAAGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGCATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAATATCAGCACAGGATATGATGCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTAGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAG TTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTNCTGAAATTTCAATACGATGCGGAGTCAATGATACAATATATGNTCACCTCGGATGGNTTTTTGAGTTGAGCCGAACAAACTTTCCAAGGTTGGNCATGTGACATGGCCAGCTGCGCAAAATATANGGNAAA CCACAGAACTCGTANGATGGATCCTTGNAAACAGGNGTACCATGCGTCAGNGCNCCACTTGGTTTACAAAA                                                                                                                                                                                                                                     ]
[+] EMBL CB097122             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGTTATATGCAATGCTGTCAAAATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGTTGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTTATCCTGCGCAAGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGCATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAACATCAGCACAGGATATGATGCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATGATACAATATATGNTCACCTCANATGG NTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGNCATGTGACATGGCCAGCTGCGC AAATAT                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB675719             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ATCAAATATCAGCACAGGATATGATGCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATGATACAATATATGTTCACCTCAGATGG TTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGCCATGTGACATGGCCAGCTGCGCAAAATATA GGTAAACCCACAGAACTCGTAGGATGTATCCTTGTAAACAGGTGTACCATGCGTCAGTGCACCACTTGTTATACAAAACCTATAAATATAGGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAACTCATTCTTTGACCTTGTTTCCTTAGTTGATGTTGATCCTTCAAATACTTGGCTTCTGTTGTTGTAACAAAATGAAATGGACTGATATGTACT                                                                   ]


>consensus_8853#0 AATTTATTTCAAATAAAACCAAAAAATGCCCAAAACGGCAACTCCGATGCTTCTCCAGCC CATCTCCGGCGCCGGCGCCGGCGCTCGCCGGAGCTCCGCCGAGGGACTCTCCCCTCCTCC TACCGCTCGCCTCCGCCGCCGCGTCCTCTGCGCGATCCGCGCCGACGCGCCGCCCCCGAT CCACCTCTCCGCGGCGGCCCCCTCGCGGCCGGCGAAGCCGCCCGTCTGCACCGCCGACGA GCTCCACCACGCGCCCGTCTCCGGCGCCGGGTGGCGTCTCGCGCTCTGGCGGTACAGGCC GCCGCCTCATGCGCCGGCGAGGAACCACCCGCTGATGCTTCTGTCGGGAGTCGGGACGAA CGCCATCGGGTTCGATCTCTCCCCCGGGGCCTCATTCGCCCGTCACATGTCTAACCAGGG ATTTGATACATGGATTGTCGAAGTGAGAGGTTCTGGTCTGAGCATACGTGATCATGATAA TTCTGCTTCATCTCCATCAGGCGCTTTCGATGATATATCTAATGGCACATTGGCTCTTGA TAAATCAAGCACATTGGAGGTTGCTTCAGTTCAAAGTTCTGGTTTCTCTGGTATTGATTA TGATGACCTTGGAATAGTTGCGTTGGATGACCCACCTTTACTGATGGAGATGACTAGTTT CTTTGATCGAATTTCAAAACTTCTGGAAGAGGCTAGTTTAAATAAAAATTTTCATGAGAT CACAGATAAGATTTCGGTTCTATCTGAAATGGTAGAAAGCTCTGCCGTTATTGGTCCAAT GAGAGAAGAAAGTCTGCGTCTTCTGAAGAACTTTCAAGAGCAGATTGACTCATGGGAACA CTTTGTGGCAACTCAGATGAATCTAAATTCTGAATATAATTGGGACTTCGACCATTACTT GGAGGAGGATATACCTACTGCGGTGGAATATATTAGACAACATAGTAGAGTAAAAGATGG GAAGCTGCTTGCCATTGGACACTCAATGGGAGGAATTTTGTTATATGCAATGCTGTCAAA ATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGT TGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTCATCCTGCGCA AGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGC ATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAATATCAGCACAGGATATGAT GCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGT TGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTT CTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAA AGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACAT GGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGT TGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCA TGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATG ATACAATATATGTTCACCTCAGATGGTTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTT GGCCATGTGACATGGCCAGCTGCGCAAAATATAGGTAAACCCACAGAACTCGTAGGATGT ATCCTTGTAAACAGGTGTACCATGCGTCAGTGCACCACTTGTTATACAAAACCTATAAAT ATAGGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAA CTCATTCTTTGACCTTGTTTCCTTAGTTGATGTTGATCCTTCAAATACTTGGCTTCTGTT GTTGTAACAAAATGAAATGGACTGATATGTACTGGGATATACTGTTGGCATGTAGCGCTG TCTGCATTTGTAATGAACAGTTCTGGAGGTAATGGAATGC



consensusID : consensus_8853#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 673
fasta sequence
                              [TGCACCNGGAGTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTNTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTTATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCCCCCTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAGTGATACAATATATGTTCACCTCAGATGGTTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGCCATGTGACATGGCCAGCTGCGCAAAATATAGGTAAACCCCCAGAACTCGTAGGATGTATCCTTGTAAACAGGTGTACCCTGCGTCAGTGCCCCCCTTGTTATACAAAACCTATAAATATATGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAAAAAAAAAAAAAAA]

[-] EMBL CA759646             [TGCACCNGGAGTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGTTGTCCTTCAACTTACAACAGCTNTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTTCTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAAAGATCTTATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACATGGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCCCCCTATGACTTAGTTGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCATGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAGTGATACAATATATGTTCACCTCAGATGGTTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTTGGCCATGTGACATGGCCAGCTGCGCAAAATATAGGTAAACCCCCAGAACTCGTAGGATGTATCCTTGTAAACAGGTGTACCCTGCGTCAGTGCCCCCCTTGTTATACAAAACCTATAAATATATGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAAAAAAAAAAAAAAA]


>consensus_8853#1 TGCACCNGGAGTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGT TGTCCTTCAACTTACAACAGCTNTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTT CTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAA AGATCTTATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACAT GGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCCCCCTATGACTTAGT TGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCA TGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAGTG ATACAATATATGTTCACCTCAGATGGTTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTT GGCCATGTGACATGGCCAGCTGCGCAAAATATAGGTAAACCCCCAGAACTCGTAGGATGT ATCCTTGTAAACAGGTGTACCCTGCGTCAGTGCCCCCCTTGTTATACAAAACCTATAAAT ATATGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAA AAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8853#0      AATTTATTTCAAATAAAACCAAAAAATGCCCAAAACGGCAACTCCGATGCTTCTCCAGCC 60
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      CATCTCCGGCGCCGGCGCCGGCGCTCGCCGGAGCTCCGCCGAGGGACTCTCCCCTCCTCC 120
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TACCGCTCGCCTCCGCCGCCGCGTCCTCTGCGCGATCCGCGCCGACGCGCCGCCCCCGAT 180
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      CCACCTCTCCGCGGCGGCCCCCTCGCGGCCGGCGAAGCCGCCCGTCTGCACCGCCGACGA 240
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      GCTCCACCACGCGCCCGTCTCCGGCGCCGGGTGGCGTCTCGCGCTCTGGCGGTACAGGCC 300
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      GCCGCCTCATGCGCCGGCGAGGAACCACCCGCTGATGCTTCTGTCGGGAGTCGGGACGAA 360
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      CGCCATCGGGTTCGATCTCTCCCCCGGGGCCTCATTCGCCCGTCACATGTCTAACCAGGG 420
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      ATTTGATACATGGATTGTCGAAGTGAGAGGTTCTGGTCTGAGCATACGTGATCATGATAA 480
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TTCTGCTTCATCTCCATCAGGCGCTTTCGATGATATATCTAATGGCACATTGGCTCTTGA 540
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TAAATCAAGCACATTGGAGGTTGCTTCAGTTCAAAGTTCTGGTTTCTCTGGTATTGATTA 600
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TGATGACCTTGGAATAGTTGCGTTGGATGACCCACCTTTACTGATGGAGATGACTAGTTT 660
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      CTTTGATCGAATTTCAAAACTTCTGGAAGAGGCTAGTTTAAATAAAAATTTTCATGAGAT 720
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      CACAGATAAGATTTCGGTTCTATCTGAAATGGTAGAAAGCTCTGCCGTTATTGGTCCAAT 780
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      GAGAGAAGAAAGTCTGCGTCTTCTGAAGAACTTTCAAGAGCAGATTGACTCATGGGAACA 840
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      CTTTGTGGCAACTCAGATGAATCTAAATTCTGAATATAATTGGGACTTCGACCATTACTT 900
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      GGAGGAGGATATACCTACTGCGGTGGAATATATTAGACAACATAGTAGAGTAAAAGATGG 960
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      GAAGCTGCTTGCCATTGGACACTCAATGGGAGGAATTTTGTTATATGCAATGCTGTCAAA 1020
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      ATATGGTTTCGAAGGAGTTCCATCAAACTTAGCGGCTATTGTTACTTTGGCTTCCTCTGT 1080
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TGACTACACGACATCCAATTCATCACTGAAGATGTTACTGCCACTTGTTCATCCTGCGCA 1140
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      AGCCCTTAATGTCCCTGCTGTTCCATTGGGTACATTATTAGCGGCAGCATATCCCTGGGC 1200
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      ATCTGGTCCACCTTATCTTTTTTCCTGGCTTAATCATCAAATATCAGCACAGGATATGAT 1260
consensus_8853#1      -----------------------------------------------------------T 1
                                                                                 *

consensus_8853#0      GCACCCGGAGTTGTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGT 1320
consensus_8853#1      GCACCNGGAGT-GTTGTCCAAGCTTGTTTTTAACAACTTCTGTACAGTGCCTGCAAAGGT 60
                      ***** ***** ************************************************

consensus_8853#0      TGTCCTTCAACTTACAACAGCTTTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTT 1380
consensus_8853#1      TGTCCTTCAACTTACAACAGCTNTTCGGGAAGGGGGGCTATGCAATAGAACTGAAACTTT 120
                      ********************** *************************************

consensus_8853#0      CTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAA 1440
consensus_8853#1      CTCATACAAAGATCATTTGCGATATTGTCAGACCCCTGTCCTAGCACTAGCTGGAGATAA 180
                      ************************************************************

consensus_8853#0      AGATCTCATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACAT 1500
consensus_8853#1      AGATCTTATCTGTCCTCCTGAAGCCGTTTATGAAACTGTCAAGCTCATACCTCAGCACAT 240
                      ****** *****************************************************

consensus_8853#0      GGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCACACTATGACTTAGT 1560
consensus_8853#1      GGTGAAATATGGGGTTTTTGGAAAGCCAGAAGGCCCTCATTATGCCCCCTATGACTTAGT 300
                      ********************************************* * ************

consensus_8853#0      TGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCA 1620
consensus_8853#1      TGGAGGTCGACTGGCAACGGATGAAGTTTACCCATGCATCATAGAGTTCCTTTCTCACCA 360
                      ************************************************************

consensus_8853#0      TGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAATG 1680
consensus_8853#1      TGATCAGTAGTTTATGTAACAGTGAAGCTCCTGAAATTTCAATACGATGCGGAGTCAGTG 420
                      ********************************************************* **

consensus_8853#0      ATACAATATATGTTCACCTCAGATGGTTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTT 1740
consensus_8853#1      ATACAATATATGTTCACCTCAGATGGTTTTTGAGTTGAGCTGAACAAACTTTCCAAGGTT 480
                      ************************************************************

consensus_8853#0      GGCCATGTGACATGGCCAGCTGCGCAAAATATAGGTAAACCCACAGAACTCGTAGGATGT 1800
consensus_8853#1      GGCCATGTGACATGGCCAGCTGCGCAAAATATAGGTAAACCCCCAGAACTCGTAGGATGT 540
                      ****************************************** *****************

consensus_8853#0      ATCCTTGTAAACAGGTGTACCATGCGTCAGTGCACCACTTGTTATACAAAACCTATAAAT 1860
consensus_8853#1      ATCCTTGTAAACAGGTGTACCCTGCGTCAGTGCCCCCCTTGTTATACAAAACCTATAAAT 600
                      ********************* *********** ** ***********************

consensus_8853#0      ATAGGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAA 1920
consensus_8853#1      ATATGTATATTACATGTGCCCCTAGAAATATAACAAATTCAAAAGAAATTGTATGCTGAA 660
                      *** ********************************************************

consensus_8853#0      CTCATTCTTTGACCTTGTTTCCTTAGTTGATGTTGATCCTTCAAATACTTGGCTTCTGTT 1980
consensus_8853#1      AAAAAAAAAAAAA----------------------------------------------- 673
                         *       *                                                

consensus_8853#0      GTTGTAACAAAATGAAATGGACTGATATGTACTGGGATATACTGTTGGCATGTAGCGCTG 2040
consensus_8853#1      ------------------------------------------------------------
                                                                                  

consensus_8853#0      TCTGCATTTGTAATGAACAGTTCTGGAGGTAATGGAATGC 2080
consensus_8853#1      ----------------------------------------
                                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)