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Oryza sativa
cluster # 8858 cluster # 8858       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8858#0 length = 2685 sequences # 5  
consensus_8858#1 length = 694 sequences # 1  

consensusID : consensus_8858#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2685
fasta sequence
                              [GCGGCTGCGTCCCTCCTCCCGTTCCCGGACTCTACGCCCCGCGGAGAACGAAGCCGCCGCGGCGCACGGATTCACCGAGGCCAGCGACGGCGGCAACTGCTCCTCCCCTCTTACAAGGTTACACGATGTTTTCTGTGAGGTGCGGGCCGCCTGCATTCGCCTTTGGATTGGAAAGGGCTGCCATTACGCATCCTTCAAAGTTCAGTACTTTAGTGGTATGTGGTGCCAGGGGCCCGAGGCCAAGATATCCTCGTGTGTGGAAAACTCGCAAGAGAATCGGAACCGTTTCCAAGTCTCAAAAGCTTGTCGAATGTGTTAAAGGCTTGTCTAATGTAAAGGAGGAAGTATATGGTGCTCTTGATTCATTTGTTGCATGGGAATTGGAGTTTCCCTTGATAGCAGTAAAGAAGGCACTTAAGACCCTTGAAGATGAAAAGGAATGGAAACGGATAATTCAGGTTATTAAATGGATGTTTAACAAAGGTCAAGGAAAGACAATGGGAAGTTATTACACTTTGTTGAATGCTTTGATTGAGGATGGACGAGTGGAGGAAGCAGAAGAGCTGTATGGAAAAATATTCTCACGATATTTGGAGGGTTTGCCTCATACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGAAGATGTTTGAGGTAGGAATCCAAATATATTATACTTTTGTTCTAATGTACACCCTTCTTATGTTAATTCTGGACCATGGTTTCCCTTGCATGGAGGAACAGAAGTGAACTTGTAAAAATTTTCTGCTAACAGCCTAACACATAAGTATTGTTAAGATAGTAAGTTGTAATTTTGTTTAAATTTTTTCTTTGTTTTTCTACTGGTTTTATTTCCACCTAACAGTGTACTGATGAGAGATATTTGGACTAGGAAAACCTAACAGTGTGCTAATCTTAGAGAGCTAGGTATTTGGATATCGTTTAGTAAGTTTCTCATGATATTAGCCTGTGGTATGTATCAGCAGCCACATTGTTAGAAATAATATTCATGGGTTGGATTTATTTCTTCCATGTGACTATCATTTGGCTCCATG-TTTTTTAGTGCTGCCTTTGCTTGTATGCTTAATGGAAAGTCTTCATTGCTGCTTACTGCACTGACAAACTACATTTTCTATGCTACAATTTGCTTGAACATGATGATGTTTCAGACTGTTATCATTTTGCAAGTGTTTTAATATCTTAGGTCCTCCTCGAAAGGTCCACTGCGAAATGGCATCTTAATTGAATAGCTCTATTGAATGTTATTGAGAAGCAGATGCTACACATATCCACTGATGGAAATTTGGTAGGCATATTTTATGAAAAGAAAAAGAAAATTTGGTAGGTATGGAATTTCTGATTCCAAATAATGTTGAAACAAGCCCAAGGCCCACCTGTGATAGATTATCAAGTCAAGTGCGAAGATTCTATCCTTTTGAAAG-TTTCGTGTTTCATATATCGACCTGACTTGGTAGCTTGGGCCCTTTTTTTG-TGGAGGATAAGCTTTAGCTTAAAGTTCCCAGAAGATTAAGCTACCCCAAACAGGGCGTGGGTTATTGGTCCTCTCATGAAGCTCAAGGCCACTTTCTGCCAAGAGGCTGAAGCCTATCTCAACCAGCCTATGCAATAAGCCTGAATTGCTCCCAAAGGACCTTGCTTATAAGCAATAGTCATTTCAGTACAGCGGATGGCACAGTTCCTGTTGCAGCTATTGTATTAACTGTTTTAGGAATTTTTGTTCCTTTTCGTAGTCATGTTGGATGAGAAAACATAATCCATTATTACTATGACTTTAACTTACTCCCAGAAGAGGGCAAAGTTGCATTCTTTGTACAAAGAGACACATTTGTGTTACTTGACAAAACAACTGTTAGTTCACCAACTTTGGACTAAATATGTGGTTTTGGTCTCCCGCTCATGTTCTGAACCCAACCTTTTTTGTTGTTGAGAAGTTATACTCAAGGAAACATTGGTAGAATTGCTTATTTATTGCCAAGATTCTAAAGATCTAATCATTGTTGTCTTTCTTGTAAATTTGCCAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGGTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGACAAATATGTAAAATTAAAGAAGAAATATCCACCACCAAAATGGGAATATCGACGCATCAAAGGCAAACGCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAAAGCTGGCACAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAAGATGTAGAATATGTAAAACATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAAA]

[+] EMBL AK102734             [GCGGCTGCGTCCCTCCTCCCGTTCCCGGACTCTACGCCCCGCGGAGAACGAAGCCGCCGCGGCGCACGGATTCACCGAGGCCAGCGACGGCGGCAACTGCTCCTCCCCTCTTACAAGGTTACACGATGTTTTCTGTGAGGTGCGGGCCGCCTGCATTCGCCTTTGGATTGGAAAGGGCTGCCATTACGCATCCTTCAAAGTTCAGTACTTTAGTGGTATGTGGTGCCAGGGGCCCGAGGCCAAGATATCCTCGTGTGTGGAAAACTCGCAAGAGAATCGGAACCGTTTCCAAGTCTCAAAAGCTTGTCGAATGTGTTAAAGGCTTGTCTAATGTAAAGGAGGAAGTATATGGTGCTCTTGATTCATTTGTTGCATGGGAATTGGAGTTTCCCTTGATAGCAGTAAAGAAGGCACTTAAGACCCTTGAAGATGAAAAGGAATGGAAACGGATAATTCAGGTTATTAAATGGATGTTTAACAAAGGTCAAGGAAAGACAATGGGAAGTTATTACACTTTGTTGAATGCTTTGATTGAGGATGGACGAGTGGAGGAAGCAGAAGAGCTGTATGGAAAAATATTCTCACGATATTTGGAGGGTTTGCCTCATACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGAAGATGTTTGAGGTAGGAATCCAAATATATTATACTTTTGTTCTAATGTACACCCTTCTTATGTTAATTCTGGACCATGGTTTCCCTTGCATGGAGGAACAGAAGTGAACTTGTAAAAATTTTCTGCTAACAGCCTAACACATAAGTATTGTTAAGATAGTAAGTTGTAATTTTGTTTAAATTTTTTCTTTGTTTTTCTACTGGTTTTATTTCCACCTAACAGTGTACTGATGAGAGATATTTGGACTAGGAAAACCTAACAGTGTGCTAATCTTAGAGAGCTAGGTATTTGGATATCGTTTAGTAAGTTTCTCATGATATTAGCCTGTGGTATGTATCAGCAGCCACATTGTTAGAAATAATATTCATGGGTTGGATTTATTTCTTCCATGTGACTATCATTTGGCTCCATGTTTTTTTAGTGCTGCCTTTGCTTGTATGCTTAATGGAAAGTCTTCATTGCTGCTTACTGCACTGACAAACTACATTTTCTATGCTACAATTTGCTTGAACATGATGATGTTTCAGACTGTTATCATTTTGCAAGTGTTTTAATATCTTAGGTCCTCCTCGAAAGGTCCACTGCGAAATGGCATCTTAATTGAATAGCTCTATTGAATGTTATTGAGAAGCAGATGCTACACATATCCACTGATGGAAATTTGGTAGGCATATTTTATGAAAAGAAAAAGAAAATTTGGTAGGTATGGAATTTCTGATTCCAAATAATGTTGAAACAAGCCCAAGGCCCACCTGTGATAGATTATCAAGTCAAGTGCGAAGATTCTATCCTTTTGAAAG TTTCGTGTTTCATATATCGACCTGACTTGGTAGCTTGGGCCCTTTTTTTG TGGAGGATAAGCTTTAGCTTAAAGTTCCCAGAAGATTAAGCTACCCCAAACAGGGCGTGGGTTATTGGTCCTCTCATGAAGCTCAAGGCCACTTTCTGCCAAGAGGCTGAAGCCTATCTCAACCAGCCTATGCAATAAGCCTGAATTGCTCCCAAAGGACCTTGCTTATAAGCAATAGTCATTTCAGTACAGCGGATGGCACAGTTCCTGTTGCAGCTATTGTATTAACTGTTTTAGGAATTTTTGTTCCTTTTCGTAGTCATGTTGGATGAGAAAACATAATCCATTATTACTATGACTTTAACTTACTCCCAGAAGAGGGCAAAGTTGCATTCTTTGTACAAAGAGACACATTTGTGTTACTTGACAAAACAACTGTTAGTTCACCAACTTTGGACTAAATATGTGGTTTTGGTCTCCCGCTCATGTTCTGAACCCAACCTTTTTTGTTGTTGAGAAGTTATACTCAAGGAAACATTGGTAGAATTGCTTATTTATTGCCAAGATTCTAAAGATCTAATCATTGTTGTCTTTCTTGTAAATTTGCCAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGGTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGACAAATATGTAAAATTAAAGAAGAAATATCCACCACCAAAATGGGAATATCGACGCATCAAAGGCAAACGCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAAAGCTGGCACAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAAGATGTAGAATATGTAAAACATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGATTTATGATATCAT                       ]
[+] EMBL CB673397             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ATGTTTAACAAAGGTCAAGGAAAGACAATGGGAAGTTATTACACTTTGTTGAATGCTTTGATTGAGGATGGACGAGTGGAGGAAGCAGAAGAGCTGTATGGAAAAATATTCTCACGATATTTGGAGGGTTTGCCTCATACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGAAGATGTTTGAGGTAGGAATCCAAATATATTATACTTTTGTTCTAATGTACACCCTTCTTATGTTAATTCTGGACCATGGTTTCCCTTGCATGGAGGAACAGAAGTGAACTTGTAAAAATTTTCTGCTAACAGCCTAACACATAAGTATTGTTAAGATAGTAAGTTGTAATTTTGTTTAAATTTTTTCTTTGTTTTTCTACTGGTTTTATTTCCACCTAACAGTGTACTGATCAGAGATATTTGGACTAGGAAAACCTAACAGTGTGCTAATCTTAGAGAGCTAGGTATTTGGATATCGTTTAGTAAGTTTCTCATGATATTAGCCTGTGGTATGTATCAGCAGCCACAATGTTAGAAATAATATTCATGGGTTGGATTTATTTCTTCCATGTGACTATCATTTGGCTCCATG TTTTTTAGTGCTGCCTTTGCTTGTATGCTTAATGGAAAGTCTTCATTGCTGCTTACTGCACTGACAAACTACATTTTCTATGCTACAATTTGCTTGAACATGATGATGTTTCAGACTGTTATCATTTTGCAAGTGTTTTAATATCTTAGGTCCTCCTCNGAAGGTCCACTGCGAAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CF312017             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GGTTGGATTTATTTCTTCCATGTGACTATCATTTGGCTCCATG TTTTTTAGTGCTGCCTTTGCTTGTATGCTTAATGGAAAGTCTTCATTGCTGCTTACTGCACTGACAAACTACATTTTCTATGCTACAATTTGCTTGAACATGATGATGTTTCAGACTGTTATCATTTTGCAAGTGTTTTAATATCTTAGGTCCTCCTCGAAAGGTCCACTGCGAAATGGCATCTTAATTGAATAGCTCTATTGAATGTTATTGAGAAGCAGATGCTACACATATCCACTGATGAAAATTTGGTAGGCATATTTTATGAAAAGAAAAAGAAAATTTGGTAGGTATGGAATTTCTGATTCCAAATAATGTTGAAACAAGCCCATGGCCCACCTGTGATAGATTATCAAGTCAAGTGCGAAGATTCTATCCTTTTGAAAGTTTTCGTGTTTCATATATCGACCTGACTTGGTAGCTTGGGCCCTTTTTTTGTTGGAGGATAAGCTTTAGCTTAAAGTTCCCAGAAGATT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[-] EMBL CB673398             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ATGTGGTTTTGGTCTCCCGCTCATGTTCTGAACCCAACCTTTTTTGTTGTTGAGAAGTTATACTCAAGGAAACATTGGTAGAATTGCTTATTTATTGCCAAGATTCTAAAGATCTAATCATTGTTGTCTTTCTTGTAAATTTGCCAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGGTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGACAAATATGTAAAATTAAAGAAGAAATATCCACCACCAAAATGGGAATATCGACGCATCAAAGGCAAACGCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAAAGCTGGCACAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAAGATGTAGAATATGTAAAACATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGATTTATGATATCATT                      ]
[-] EMBL CF312018             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         ATCGACGCATCAAAGGCAAACGCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAAAGCTGGCACAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAAGATGTAGAATATGTAAAACATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTATACAAGGCCATGTTGTTTTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAAA]


>consensus_8858#0 GCGGCTGCGTCCCTCCTCCCGTTCCCGGACTCTACGCCCCGCGGAGAACGAAGCCGCCGC GGCGCACGGATTCACCGAGGCCAGCGACGGCGGCAACTGCTCCTCCCCTCTTACAAGGTT ACACGATGTTTTCTGTGAGGTGCGGGCCGCCTGCATTCGCCTTTGGATTGGAAAGGGCTG CCATTACGCATCCTTCAAAGTTCAGTACTTTAGTGGTATGTGGTGCCAGGGGCCCGAGGC CAAGATATCCTCGTGTGTGGAAAACTCGCAAGAGAATCGGAACCGTTTCCAAGTCTCAAA AGCTTGTCGAATGTGTTAAAGGCTTGTCTAATGTAAAGGAGGAAGTATATGGTGCTCTTG ATTCATTTGTTGCATGGGAATTGGAGTTTCCCTTGATAGCAGTAAAGAAGGCACTTAAGA CCCTTGAAGATGAAAAGGAATGGAAACGGATAATTCAGGTTATTAAATGGATGTTTAACA AAGGTCAAGGAAAGACAATGGGAAGTTATTACACTTTGTTGAATGCTTTGATTGAGGATG GACGAGTGGAGGAAGCAGAAGAGCTGTATGGAAAAATATTCTCACGATATTTGGAGGGTT TGCCTCATACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGA AGATGTTTGAGGTAGGAATCCAAATATATTATACTTTTGTTCTAATGTACACCCTTCTTA TGTTAATTCTGGACCATGGTTTCCCTTGCATGGAGGAACAGAAGTGAACTTGTAAAAATT TTCTGCTAACAGCCTAACACATAAGTATTGTTAAGATAGTAAGTTGTAATTTTGTTTAAA TTTTTTCTTTGTTTTTCTACTGGTTTTATTTCCACCTAACAGTGTACTGATGAGAGATAT TTGGACTAGGAAAACCTAACAGTGTGCTAATCTTAGAGAGCTAGGTATTTGGATATCGTT TAGTAAGTTTCTCATGATATTAGCCTGTGGTATGTATCAGCAGCCACATTGTTAGAAATA ATATTCATGGGTTGGATTTATTTCTTCCATGTGACTATCATTTGGCTCCATGTTTTTTAG TGCTGCCTTTGCTTGTATGCTTAATGGAAAGTCTTCATTGCTGCTTACTGCACTGACAAA CTACATTTTCTATGCTACAATTTGCTTGAACATGATGATGTTTCAGACTGTTATCATTTT GCAAGTGTTTTAATATCTTAGGTCCTCCTCGAAAGGTCCACTGCGAAATGGCATCTTAAT TGAATAGCTCTATTGAATGTTATTGAGAAGCAGATGCTACACATATCCACTGATGGAAAT TTGGTAGGCATATTTTATGAAAAGAAAAAGAAAATTTGGTAGGTATGGAATTTCTGATTC CAAATAATGTTGAAACAAGCCCAAGGCCCACCTGTGATAGATTATCAAGTCAAGTGCGAA GATTCTATCCTTTTGAAAGTTTCGTGTTTCATATATCGACCTGACTTGGTAGCTTGGGCC CTTTTTTTGTGGAGGATAAGCTTTAGCTTAAAGTTCCCAGAAGATTAAGCTACCCCAAAC AGGGCGTGGGTTATTGGTCCTCTCATGAAGCTCAAGGCCACTTTCTGCCAAGAGGCTGAA GCCTATCTCAACCAGCCTATGCAATAAGCCTGAATTGCTCCCAAAGGACCTTGCTTATAA GCAATAGTCATTTCAGTACAGCGGATGGCACAGTTCCTGTTGCAGCTATTGTATTAACTG TTTTAGGAATTTTTGTTCCTTTTCGTAGTCATGTTGGATGAGAAAACATAATCCATTATT ACTATGACTTTAACTTACTCCCAGAAGAGGGCAAAGTTGCATTCTTTGTACAAAGAGACA CATTTGTGTTACTTGACAAAACAACTGTTAGTTCACCAACTTTGGACTAAATATGTGGTT TTGGTCTCCCGCTCATGTTCTGAACCCAACCTTTTTTGTTGTTGAGAAGTTATACTCAAG GAAACATTGGTAGAATTGCTTATTTATTGCCAAGATTCTAAAGATCTAATCATTGTTGTC TTTCTTGTAAATTTGCCAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGG TTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGACAAATATGT AAAATTAAAGAAGAAATATCCACCACCAAAATGGGAATATCGACGCATCAAAGGCAAACG CATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAAAGCTGGCAC AGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAG TGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTA GTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATG AACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGC CACATTAGAAGATGTAGAATATGTAAAACATTAGCTCATTACAGATTTAATTAGCACGAT TAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCC TTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAAA



consensusID : consensus_8858#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 694
fasta sequence
                              [CCTCGTACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGAAGATGTNTGAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGGTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGNCAAATATGTAAAATTAAAGAAGAAATATCCNCCACCAAAATGGGAATATCGACACATCAAAGGCAAACGCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAACCCTGGCACAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAAGATGTAGAATATGTAAAATATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAA]

[-] EMBL CA760245             [CCTCGTACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGAAGATGTNTGAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGGTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGNCAAATATGTAAAATTAAAGAAGAAATATCCNCCACCAAAATGGGAATATCGACACATCAAAGGCAAACGCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAACCCTGGCACAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAAGATGTAGAATATGTAAAATATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAA]


>consensus_8858#1 CCTCGTACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGAAG ATGTNTGAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACGGTTCGATTATC AGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGNCAAATATGTAAAATTAAAG AAGAAATATCCNCCACCAAAATGGGAATATCGACACATCAAAGGCAAACGCATCAGAGTA AAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAACCCTGGCACAGATGAAGTG GAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAAGTGCAGGCCTG GACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGTAGTTCAGAGCT TTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAATGAACTGATAAG AAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTGCCACATTAGAA GATGTAGAATATGTAAAATATTAGCTCATTACAGATTTAATTAGCACGATTAGCATGTTA TACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTCCTTGTACTGAT TTATGATATCATTCCTTAGAGCAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8858#0      GCGGCTGCGTCCCTCCTCCCGTTCCCGGACTCTACGCCCCGCGGAGAACGAAGCCGCCGC 60
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GGCGCACGGATTCACCGAGGCCAGCGACGGCGGCAACTGCTCCTCCCCTCTTACAAGGTT 120
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      ACACGATGTTTTCTGTGAGGTGCGGGCCGCCTGCATTCGCCTTTGGATTGGAAAGGGCTG 180
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CCATTACGCATCCTTCAAAGTTCAGTACTTTAGTGGTATGTGGTGCCAGGGGCCCGAGGC 240
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CAAGATATCCTCGTGTGTGGAAAACTCGCAAGAGAATCGGAACCGTTTCCAAGTCTCAAA 300
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      AGCTTGTCGAATGTGTTAAAGGCTTGTCTAATGTAAAGGAGGAAGTATATGGTGCTCTTG 360
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      ATTCATTTGTTGCATGGGAATTGGAGTTTCCCTTGATAGCAGTAAAGAAGGCACTTAAGA 420
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CCCTTGAAGATGAAAAGGAATGGAAACGGATAATTCAGGTTATTAAATGGATGTTTAACA 480
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      AAGGTCAAGGAAAGACAATGGGAAGTTATTACACTTTGTTGAATGCTTTGATTGAGGATG 540
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GACGAGTGGAGGAAGCAGAAGAGCTGTATGGAAAAATATTCTCACGATATTTGGAGGGTT 600
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TGCCTCATACCTTTTTCATGAGAATGATATCTTTATATTACAGACTAGAATCATATCAGA 660
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      AGATGTTTGAGGTAGGAATCCAAATATATTATACTTTTGTTCTAATGTACACCCTTCTTA 720
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TGTTAATTCTGGACCATGGTTTCCCTTGCATGGAGGAACAGAAGTGAACTTGTAAAAATT 780
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TTCTGCTAACAGCCTAACACATAAGTATTGTTAAGATAGTAAGTTGTAATTTTGTTTAAA 840
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TTTTTTCTTTGTTTTTCTACTGGTTTTATTTCCACCTAACAGTGTACTGATGAGAGATAT 900
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TTGGACTAGGAAAACCTAACAGTGTGCTAATCTTAGAGAGCTAGGTATTTGGATATCGTT 960
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TAGTAAGTTTCTCATGATATTAGCCTGTGGTATGTATCAGCAGCCACATTGTTAGAAATA 1020
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      ATATTCATGGGTTGGATTTATTTCTTCCATGTGACTATCATTTGGCTCCATGTTTTTTAG 1080
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TGCTGCCTTTGCTTGTATGCTTAATGGAAAGTCTTCATTGCTGCTTACTGCACTGACAAA 1140
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CTACATTTTCTATGCTACAATTTGCTTGAACATGATGATGTTTCAGACTGTTATCATTTT 1200
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GCAAGTGTTTTAATATCTTAGGTCCTCCTCGAAAGGTCCACTGCGAAATGGCATCTTAAT 1260
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TGAATAGCTCTATTGAATGTTATTGAGAAGCAGATGCTACACATATCCACTGATGGAAAT 1320
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TTGGTAGGCATATTTTATGAAAAGAAAAAGAAAATTTGGTAGGTATGGAATTTCTGATTC 1380
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CAAATAATGTTGAAACAAGCCCAAGGCCCACCTGTGATAGATTATCAAGTCAAGTGCGAA 1440
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GATTCTATCCTTTTGAAAGTTTCGTGTTTCATATATCGACCTGACTTGGTAGCTTGGGCC 1500
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CTTTTTTTGTGGAGGATAAGCTTTAGCTTAAAGTTCCCAGAAGATTAAGCTACCCCAAAC 1560
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      AGGGCGTGGGTTATTGGTCCTCTCATGAAGCTCAAGGCCACTTTCTGCCAAGAGGCTGAA 1620
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GCCTATCTCAACCAGCCTATGCAATAAGCCTGAATTGCTCCCAAAGGACCTTGCTTATAA 1680
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GCAATAGTCATTTCAGTACAGCGGATGGCACAGTTCCTGTTGCAGCTATTGTATTAACTG 1740
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TTTTAGGAATTTTTGTTCCTTTTCGTAGTCATGTTGGATGAGAAAACATAATCCATTATT 1800
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      ACTATGACTTTAACTTACTCCCAGAAGAGGGCAAAGTTGCATTCTTTGTACAAAGAGACA 1860
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      CATTTGTGTTACTTGACAAAACAACTGTTAGTTCACCAACTTTGGACTAAATATGTGGTT 1920
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      TTGGTCTCCCGCTCATGTTCTGAACCCAACCTTTTTTGTTGTTGAGAAGTTATACTCAAG 1980
consensus_8858#1      ------------------------------------------------------------
                                                                                  

consensus_8858#0      GAAACATTGGTAGAATTGCTTATTTATTGCCAAGAT-TCTAAAGATCTAATCATTGTTGT 2039
consensus_8858#1      ----------CCTCGTACCTTTTTCATGAGAATGATATCTTTATAT-TACAGACTAGAAT 49
                                     *  *** ** **    * *** ***  * ** **   * *    *

consensus_8858#0      CTTTCTTGTAAATTTGCCAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACG 2099
consensus_8858#1      CATATCAGAAGATGTNTGAGATCTTTGCTGATATGGAGGAGCTGGGTGTTAGACCTGACG 109
                      * *    * * ** *   ******************************************

consensus_8858#0      GTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGACAAATATG 2159
consensus_8858#1      GTTCGATTATCAGAATGCTTGGTGAGGTATTCCAGAAGTTAGGGATGTTGGNCAAATATG 169
                      *************************************************** ********

consensus_8858#0      TAAAATTAAAGAAGAAATATCCACCACCAAAATGGGAATATCGACGCATCAAAGGCAAAC 2219
consensus_8858#1      TAAAATTAAAGAAGAAATATCCNCCACCAAAATGGGAATATCGACACATCAAAGGCAAAC 229
                      ********************** ********************** **************

consensus_8858#0      GCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAAAGCTGGCA 2279
consensus_8858#1      GCATCAGAGTAAAAGTCTACCCAAAAGACGAAATTGAAGAACCAATGAGAAACCCTGGCA 289
                      ****************************************************  ******

consensus_8858#0      CAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAA 2339
consensus_8858#1      CAGATGAAGTGGAAGAGGAAGAAAACATGGATGTAGATAGTGAATTGGAAGAAGCGGCAA 349
                      ************************************************************

consensus_8858#0      GTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGT 2399
consensus_8858#1      GTGCAGGCCTGGACAGGAATGTATTGGACGAAGCAGCTTGTGGAGACCTTGAATTTGTGT 409
                      ************************************************************

consensus_8858#0      AGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAAT 2459
consensus_8858#1      AGTTCAGAGCTTTCCTTTGGTATTATTCATGCCTGCTTCATCAAAGCAGGTTAGAACAAT 469
                      ************************************************************

consensus_8858#0      GAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTG 2519
consensus_8858#1      GAACTGATAAGAAGTAACTGACTAGTTAGATTCAGTTTTGTGCCATGAAGTCATGGATTG 529
                      ************************************************************

consensus_8858#0      CCACATTAGAAGATGTAGAATATGTAAAACATTAGCTCATTACAGATTTAATTAGCACGA 2579
consensus_8858#1      CCACATTAGAAGATGTAGAATATGTAAAATATTAGCTCATTACAGATTTAATTAGCACGA 589
                      ***************************** ******************************

consensus_8858#0      TTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTC 2639
consensus_8858#1      TTAGCATGTTATACAAGGCCATGTTGTTCTAGAACAAGAGTTTCCTCGGAGTTTGTAGTC 649
                      ************************************************************

consensus_8858#0      CTTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAAA 2685
consensus_8858#1      CTTGTACTGATTTATGATATCATTCCTTAGAGCAAAAAAAAAAAA- 694
                      ********************************************* 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)