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Oryza sativa
cluster # 886 cluster # 886       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_886#0 length = 2250 sequences # 2  

consensusID : consensus_886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 2250
fasta sequence
                              [AAAACCTGAAAACCCTCGCCGCTTCTCCCCGTCCTTCCTTTCCGAGCTGCCCCGCGCCGTCGTTACTTCCCCCCCCCCCCCCCCCCCCCAACCAGCCATGGCGGGCGACAAGACGGCGGCGCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTCCGATCGGCGAGTCCAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGATCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAAGCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTTAGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGCAAGGTTGTTTCTCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATGTGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAATTAATTCTTTTACACTTTCTCATGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAGATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGGTCCTGTCCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAAGGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCTTACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGGGGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCTCTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGGCCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGTTCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATACTTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTCTCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGCAAATAGCAAGGATGCAGAACCTGTTCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGACACAACCAAGGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCTGAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAGTGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATTGCTAAAATGCTTGTACAATAGAGATGAAAAGGTCATTGTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATG-AAG-AATCTGAAGTTGATGCTAT-GGAAACTGACGAGGG-GAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTG-AGCATTCAGATGGGAGTGATATCATGACCGACTGATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCGAAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAAATAGTTGTTGCTCTTCAC-TTGGTAGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGATCTTGATGTAAGTCAAGCCAGCTTGTATCAAT-AGCATAACATATAACTTTAACCTCCTCGTCAAATTTTGTATCT-GGCGAGTGCATAACTGCATATTACTGCAAGCTGTTTCAGCTTGTTTTCTATGAAGATTAACGTCTCAATTGAAAAA]

[+] EMBL AK073564             [AAAACCTGAAAACCCTCGCCGCTTCTCCCCGTCCTTCCTTTCCGAGCTGCCCCGCGCCGTCGTTACTTCCCCCCCCCCCCCCCCCCCCCAACCAGCCATGGCGGGCGACAAGACGGCGGCGCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTCCGATCGGCGAGTCCAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGATCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAAGCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTTAGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGCAAGGTTGTTTCTCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATGTGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAATTAATTCTTTTACACTTTCTCATGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAGATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGGTCCTGTCCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAAGGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCTTACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGGGGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCTCTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGGCCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGTTCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATACTTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTCTCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGCAAATAGCAAGGATGCAGAACCTGTTCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGACACAACCAAGGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCTGAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAGTGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATTGCTAAAATGCTTGTACAATAGAGATGAAAAGGTCATTGTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATG AAG AATCTGAAGTTGATGCTAT GGAAACTGACGAGGG GAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTG AGCATTCAGATGGGAGTGATATCATGACCGACTGATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCGAAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAAATAGTTGTTGCTCTTCAC TTGGTAGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGATCTTGATGTAAGTCAAGCCAGCTTGTATCAAT AGCATAACATATAACTTTAACCTCCTCGTCAAATTTTGTATCT GGCGAGTGCATAACTGCATATTACTGCAAGCTGTTTCAGC                                    ]
[+] EMBL AF074730             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATGAAAGAAATCTGAAGTTGATGCTATGGGAAACTGACGAGGGAGAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTGAAGCATTCAGATGGGAGTGATATCATGACCGACTGATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCGAAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAATTAGTTGTTGCTCTNCACTTTGGTNGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGATCTTGATGTNAGTCNAGCCAGCTTGTNTCNATAAGCATAACATATAACTTTAACCCCCTCGTCCAATTTTGT TCTGGGCGANTGCATAACTGCATATTACTGCAAGCTGTTTCACTTTGTTTTCTATGAAGATTAACGTCTCAATTGAAAAA]


>consensus_886#0 AAAACCTGAAAACCCTCGCCGCTTCTCCCCGTCCTTCCTTTCCGAGCTGCCCCGCGCCGT CGTTACTTCCCCCCCCCCCCCCCCCCCCCAACCAGCCATGGCGGGCGACAAGACGGCGGC GCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTC CGATCGGCGAGTCCAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGA TCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAA GCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTT AGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGCAAGGTTGTTTC TCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATG TGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAAT TAATTCTTTTACACTTTCTCATGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAG ATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGGTCCTGT CCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAA GGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCT TACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGG GGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCT CTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGG CCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGT TCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATAC TTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTC TCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGCAAATAGCAAGGATGCAGAACCTGT TCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGACACAACCAA GGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCT GAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAG TGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATT GCTAAAATGCTTGTACAATAGAGATGAAAAGGTCATTGTAAAGTCAGTATCACTCCTAAC ACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGC AAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCAT AGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAG AACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGG GGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAA GGACACAGACGATGAAGAATCTGAAGTTGATGCTATGGAAACTGACGAGGGGAGCCAAGA GCTGGGAGACGTTACTGATGCCTCTGAGCATTCAGATGGGAGTGATATCATGACCGACTG ATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCG AAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAAATAGTTGTTGCTC TTCACTTGGTAGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGAT CTTGATGTAAGTCAAGCCAGCTTGTATCAATAGCATAACATATAACTTTAACCTCCTCGT CAAATTTTGTATCTGGCGAGTGCATAACTGCATATTACTGCAAGCTGTTTCAGCTTGTTT TCTATGAAGATTAACGTCTCAATTGAAAAA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)