These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_886#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 2250 fasta sequence [AAAACCTGAAAACCCTCGCCGCTTCTCCCCGTCCTTCCTTTCCGAGCTGCCCCGCGCCGTCGTTACTTCCCCCCCCCCCCCCCCCCCCCAACCAGCCATGGCGGGCGACAAGACGGCGGCGCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTCCGATCGGCGAGTCCAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGATCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAAGCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTTAGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGCAAGGTTGTTTCTCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATGTGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAATTAATTCTTTTACACTTTCTCATGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAGATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGGTCCTGTCCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAAGGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCTTACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGGGGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCTCTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGGCCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGTTCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATACTTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTCTCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGCAAATAGCAAGGATGCAGAACCTGTTCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGACACAACCAAGGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCTGAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAGTGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATTGCTAAAATGCTTGTACAATAGAGATGAAAAGGTCATTGTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATG-AAG-AATCTGAAGTTGATGCTAT-GGAAACTGACGAGGG-GAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTG-AGCATTCAGATGGGAGTGATATCATGACCGACTGATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCGAAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAAATAGTTGTTGCTCTTCAC-TTGGTAGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGATCTTGATGTAAGTCAAGCCAGCTTGTATCAAT-AGCATAACATATAACTTTAACCTCCTCGTCAAATTTTGTATCT-GGCGAGTGCATAACTGCATATTACTGCAAGCTGTTTCAGCTTGTTTTCTATGAAGATTAACGTCTCAATTGAAAAA] [+] EMBL AK073564 [AAAACCTGAAAACCCTCGCCGCTTCTCCCCGTCCTTCCTTTCCGAGCTGCCCCGCGCCGTCGTTACTTCCCCCCCCCCCCCCCCCCCCCAACCAGCCATGGCGGGCGACAAGACGGCGGCGCCCCCTCCGCCAGACGCGGCCGCCTTCTCCCCCGACGGCGAGCTCTTCGCTGCCGTCTCCGATCGGCGAGTCCAGGTATGGCGTACAGGAGGAGGAGAAATAATAGAAGGATGGACTGATCCAATTTCAGCCCCAGATGATTCATACAGTTGTATTGCATGTTGCTCTGTTCAGAAAAAGCATAAAAAGGATGGAAACCTTATTCTTGTTGCTGTTGGTACTACAAATGGTCAAGTTTTAGTTCTCGATTCTACTGGTGTCATATGGAAGAATGCTCCTCATACTTGCAAGGTTGTTTCTCTTCATTTTGCAAGACATGGGCGTGTTCTTTATACTGCTGGCATGGATGGAATTATATGTGAATTGAATTCTCGCACCGGGGAATCCAAAGACACTATTAAAGCTACGAAGAAACCAATTAATTCTTTTACACTTTCTCATGATGAGAAGTTTATGGGTGTATCAAGTAAGATAACAAGATTATTTAGTGTGAGTGAGAAAAAAGAGATCTTGAGGATTCCTTCTGATGTTGGTCCTGTCCAGCTGATGTCTGTATCAGATGATGGACGTTTTTTGGTTTCTCATGTTGACAATAATAAGGAAGTGCAAGTGTGGTCTTGCGATCAGAATAGTTGTACCATCGTTTCTACAGCCTCCCTTACAATGCAAAATCAGCCAAAGATAGTAGAGTGTACAAGGAGCACATCATATGGAGATGGGGGCATTGTTCTCGCAGTATCGAAGAAAGGTGTTGCTCATGTCTGGCATTTACAGACCCTCTCCCAAAATGAAGTACTGCCCACAAAAATCTCAGTCAAAAATTCACTCGATAAAAAAGGCCGTATCCCAATAATTTCAGCTAAATTATGTGACACCAATGAAGACAATACTGTTAAGGTTCATGTTGTATTTGGATCACCAAACTTTTTACAGTTCAAGGTTGTAGAATTGGATGATACTTGCAAGGACATCAACTTGGTTGCAGAGTATGATGAACTAGCTAAACAAGATATGGTGTCTCCGCAGGAAAGGAATTTGGAGCAAGAAGCTAAAGCAAATAGCAAGGATGCAGAACCTGTTCAAGGAAAAGCAAAGAAAAGGACATCATCCGTTTTGGATTCCACTAATGACACAACCAAGGAAGTGAATCCAGAGTACAATCTTGATGAACCGACCATGGAGGAAAAACTTGCAAGTCTGAATTTGCTAAACAAGTCTGAAATTACTGAAGAGCAACCACCCTCTTTAGCGCCACCAAGTGCAGATTCAGTCCATGTTTTGCTGAAGCAAGCTTTGCGTGCTGATGATCACACTGAATTGCTAAAATGCTTGTACAATAGAGATGAAAAGGTCATTGTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATG AAG AATCTGAAGTTGATGCTAT GGAAACTGACGAGGG GAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTG AGCATTCAGATGGGAGTGATATCATGACCGACTGATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCGAAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAAATAGTTGTTGCTCTTCAC TTGGTAGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGATCTTGATGTAAGTCAAGCCAGCTTGTATCAAT AGCATAACATATAACTTTAACCTCCTCGTCAAATTTTGTATCT GGCGAGTGCATAACTGCATATTACTGCAAGCTGTTTCAGC ] [+] EMBL AF074730 [ GTAAAGTCAGTATCACTCCTAACACCGGCAGACGTCGTTAAGCTTCTCAAGTTCTTTGTATTGCTAATACAATCCAGGGGTGCAAAACTGGTTTGTATGCTCCCATGGCTTCAGGCTTTACTTTGTCGGCACATGAGCAGCATAGTGTCTCAGGAATCTTCTCTACTGTTGCTAAACTCACTCTATCAGCTTATTGATGCAAGAACATCAACCTTCAAGTCAGCACTTCAACTTTCAACTACCCTAGACTATCTTTTCAGCGGGGTTTCTGACGGTGAAACTGATGAGGAGGACGCTGTTCCACCGATAATATACGAGGACAAGGACACAGACGATGAAAGAAATCTGAAGTTGATGCTATGGGAAACTGACGAGGGAGAGCCAAGAGCTGGGAGACGTTACTGATGCCTCTGAAGCATTCAGATGGGAGTGATATCATGACCGACTGATTTACTTGCGCTCTTCTTTAATTTAGTTCATGATCAGCCTGACAAGGTAGGAGCTCGCGAAGTTGGACAAATCATGGTTGCTCCTGTTGTAGTGCTGTGCCTGGAATTAGTTGTTGCTCTNCACTTTGGTNGAAGCTCCGATTCGCTCCCAATATGATTGCCTTAGTGTTAGGATCAGATCTTGATGTNAGTCNAGCCAGCTTGTNTCNATAAGCATAACATATAACTTTAACCCCCTCGTCCAATTTTGT TCTGGGCGANTGCATAACTGCATATTACTGCAAGCTGTTTCACTTTGTTTTCTATGAAGATTAACGTCTCAATTGAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||