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Oryza sativa
cluster # 8886 cluster # 8886       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8886#0 length = 2542 sequences # 3  
consensus_8886#1 length = 780 sequences # 3  

consensusID : consensus_8886#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2542
fasta sequence
                              [CCTCTCCCTCCTTCCTCAACCACGTCGCCGACGACCACCACCACCCACCAAATCACGCATCTCCCCACTCCATTGCCACCGCCTCACGCTTCTACCCCTCTAGAACCTTCCAGAACAATCCAGTATCCCCTCTCCTCGCCTCCTCGAGATCGCGCGGAGAGGGAGGCGGCGTCGTCGCTTGATCTGTCAGGAGGAGGAGGAGGAGGAGGGTAGTGTGAAATCGGGGGATATGGTGGTGGCGGCGGCGGCGAGGCCGCAGACGGCGGAGGCGCTGTCGAAGCGGGCGAGCATGCTGCGGGACTCGCTGCAGAGGAGCCAGGGGAACACGGACGGGATGGTCACCATCCTCGGATCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGATGGCATCCTCTCCCAGTTCGACCTTGCGCGCCGGGCTGAGGCAGCGGTATTGAAGGGTCCTCATGAGGATTTAGAGAGCTACCTGGAGGCAGTGGATCTGCTCAAAGGCATCGTTCGCTTCTTTTCCACAAACAAGAACTTCAAGAGCAGTGAAGGAGTTCTGAATCATGTCAACAACCTGTTGGCTAAGTCTGCTCTGAAAATTGAAGAGGAATTTAGGCAGCTGATGACTACGTACAGCAAACCTATTGAGCCTGATCGTCTCTTTGATTGTCTTCCCAAGTCTCTGCGGCCAACAAAAGATGATCCTGACGCTGATCCAGGGAATGCTGGCCACTCTGAGCATCCATCCAAAAGCTTGGAGACTGCAGTATACCGGACACCAACACTAATTCCTCCAAGAATCCTGCCTCTCATGAATGACATCGCTCAGCAGCTCATTCAGGCTGGAAATCAGCAGTCATGCTATAAAATTTACAGAGATACCCGTGGATCTGCACTAGAATCGAGCCTTCGGAAATTAGGAGTAGAGAAGCTTAGTAAAGAGGATGTACAGAAGATGCAGTGGGAAGCTTTGGAGGCTAAAATTGGAAACTGGATCCATTTTATGCGAATTGCGGTCAAACTACTACTAGCAGGTGAAAGAAAAATCTGTGACCAGATTTTTGATGGTGTCAACTTTAACAAGGATCAATGTTTTGCTGAACTGACAGCAAATAGTGTCGTGACTCTTCTAAGCTTTGGAGATGCCGTTGCTAAAAGCAAAAGGTCTCCTGAAAAGTTGTTTGTATTGCTAGACATGTACGAAGTAATGCATGAACTTCAACCCGAGATTGAGGTGATTTTCGAAGGAAAATCATGCTCTGAGATGCGGGAGGCTTCATTGGGCTTGGCTAAGCGCTTGGCTCAGACTGCTCAAGAAACCTTTGCTGATTTTGAGGAGGCTGTTGAAAAGGATGCTTCGAAGACTATTGTTAATGATGGAACTGTGCATCCTTTGACTAGCTATGTGATTAATTATGTTAAATTCTTATTTGATTACCAATCGACACTGAAGCTACTATTTCAGGAATTTGAAACTGGTAGTGAGACAGAATCTCAACTTGCTGTTGTTACCATGAGGATAATGCAAGCCCTACAAAATAACTTGGAT-GGAAAATCTAAACAGTACAGGGATCCTGCATTGACCTACTTATTTCTGATGAATAACATTCATTATATGGTCAGATCTGTTCGTAGATCAGAAGCAAAGGATATACTTGGTGATGACTGGATTCAGAGGCACCGTAGAATTGTGCAGCAAAATGCCAATCAGTATAAACGTGTTGCTTGGGCAAAGATTCTCCAGACTCTTTCCATACAAGGTGCGGGCAGCACTGGTTCATCAGATCTTAGCAGCAGTGGGGTTTCAAGAGCTATGATCAAAGAACGGTTTAAATCTTTCAACATGCAATTCGAAGAGCTCCATGCAAAGCAATCTCAGTGGATTGTACCTGATCAGGAATTGCGTGAATCCTTGAGGCTTGCGGTAGCTGAGGTTCTGTTACCAGCCTATCGGTCGTTTGTCAAACGTTTCGGTAACCTTGTTGAGAATGGCAAGAACCCGCACAAATACGTGAGGTACAGCCCAGAGATGGTGGAGCAGCTGTTGGGGGAATTCTTCGAAGGACAGCAATGGGGGGAGCAGAAGCGCTGAGCAGTGAACACTGTCCATGAGCGACAGCACGAGCTCTACCAGTAAGTTGAAGTTGTACATCAGCACGACTTGCAAAGATTTCTTTCCCGGACAAGCAACTAACGATTCTTTGCGTTATAACGTATTGTCATACCGATGCGCTACCGATGTATATATATATAATAGTAACTTCAGTTTGCCTCAGTGCTGAATGCCAAACACGGCAACAGGTGAAGAGGCGTGTATCTCTCTCTGTTCTCACAACACACCGATGTTATTATTGTTTTGTTTTTTTCCCGATCACAGAGTTGTACTCTTCTGTAGAAAATATTGCTTATTGCAGTGAGACTGTACTATTGGGATCGAAAGGCATAATAAAGGGGACAAGACAATGTTATGTTT]

[+] EMBL AK066482             [CCTCTCCCTCCTTCCTCAACCACGTCGCCGACGACCACCACCACCCACCAAATCACGCATCTCCCCACTCCATTGCCACCGCCTCACGCTTCTACCCCTCTAGAACCTTCCAGAACAATCCAGTATCCCCTCTCCTCGCCTCCTCGAGATCGCGCGGAGAGGGAGGCGGCGTCGTCGCTTGATCTGTCAGGAGGAGGAGGAGGAGGAGGGTAGTGTGAAATCGGGGGATATGGTGGTGGCGGCGGCGGCGAGGCCGCAGACGGCGGAGGCGCTGTCGAAGCGGGCGAGCATGCTGCGGGACTCGCTGCAGAGGAGCCAGGGGAACACGGACGGGATGGTCACCATCCTCGGATCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGATGGCATCCTCTCCCAGTTCGACCTTGCGCGCCGGGCTGAGGCAGCGGTATTGAAGGGTCCTCATGAGGATTTAGAGAGCTACCTGGAGGCAGTGGATCTGCTCAAAGGCATCGTTCGCTTCTTTTCCACAAACAAGAACTTCAAGAGCAGTGAAGGAGTTCTGAATCATGTCAACAACCTGTTGGCTAAGTCTGCTCTGAAAATTGAAGAGGAATTTAGGCAGCTGATGACTACGTACAGCAAACCTATTGAGCCTGATCGTCTCTTTGATTGTCTTCCCAAGTCTCTGCGGCCAACAAAAGATGATCCTGACGCTGATCCAGGGAATGCTGGCCACTCTGAGCATCCATCCAAAAGCTTGGAGACTGCAGTATACCGGACACCAACACTAATTCCTCCAAGAATCCTGCCTCTCATGAATGACATCGCTCAGCAGCTCATTCAGGCTGGAAATCAGCAGTCATGCTATAAAATTTACAGAGATACCCGTGGATCTGCACTAGAATCGAGCCTTCGGAAATTAGGAGTAGAGAAGCTTAGTAAAGAGGATGTACAGAAGATGCAGTGGGAAGCTTTGGAGGCTAAAATTGGAAACTGGATCCATTTTATGCGAATTGCGGTCAAACTACTACTAGCAGGTGAAAGAAAAATCTGTGACCAGATTTTTGATGGTGTCAACTTTAACAAGGATCAATGTTTTGCTGAACTGACAGCAAATAGTGTCGTGACTCTTCTAAGCTTTGGAGATGCCGTTGCTAAAAGCAAAAGGTCTCCTGAAAAGTTGTTTGTATTGCTAGACATGTACGAAGTAATGCATGAACTTCAACCCGAGATTGAGGTGATTTTCGAAGGAAAATCATGCTCTGAGATGCGGGAGGCTTCATTGGGCTTGGCTAAGCGCTTGGCTCAGACTGCTCAAGAAACCTTTGCTGATTTTGAGGAGGCTGTTGAAAAGGATGCTTCGAAGACTATTGTTAATGATGGAACTGTGCATCCTTTGACTAGCTATGTGATTAATTATGTTAAATTCTTATTTGATTACCAATCGACACTGAAGCTACTATTTCAGGAATTTGAAACTGGTAGTGAGACAGAATCTCAACTTGCTGTTGTTACCATGAGGATAATGCAAGCCCTACAAAATAACTTGGAT GGAAAATCTAAACAGTACAGGGATCCTGCATTGACCTACTTATTTCTGATGAATAACATTCATTATATGGTCAGATCTGTTCGTAGATCAGAAGCAAAGGATATACTTGGTGATGACTGGATTCAGAGGCACCGTAGAATTGTGCAGCAAAATGCCAATCAGTATAAACGTGTTGCTTGGGCAAAGATTCTCCAGACTCTTTCCATACAAGGTGCGGGCAGCACTGGTTCATCAGATCTTAGCAGCAGTGGGGTTTCAAGAGCTATGATCAAAGAACGGTTTAAATCTTTCAACATGCAATTCGAAGAGCTCCATGCAAAGCAATCTCAGTGGATTGTACCTGATCAGGAATTGCGTGAATCCTTGAGGCTTGCGGTAGCTGAGGTTCTGTTACCAGCCTATCGGTCGTTTGTCAAACGTTTCGGTAACCTTGTTGAGAATGGCAAGAACCCGCACAAATACGTGAGGTACAGCCCAGAGATGGTGGAGCAGCTGTTGGGGGAATTCTTCGAAGGACAGCAATGGGGGGAGCAGAAGCGCTGAGCAGTGAACACTGTCCATGAGCGACAGCACGAGCTCTACCAGTAAGTTGAAGTTGTACATCAGCACGACTTGCAAAGATTTCTTTCCCGGACAAGCAACTAACGATTCTTTGCGTTATAACGTATTGTCATACCGATGCGCTACCGATGTATATATATATAATAGTAACTTCAGTTTGCCTCAGTGCTGAATGCCAAACACGGCAACAGGTGAAGAGGCGTGTATCTCTCTCTGTTCTCACAACACACCGATGTTATTATTGTTTTGTTTTTTTCCCGATCACAGAGTTGTACTCTTCTGTAGAAAATATTGCTTATTGCAGTGAGACTGTACTATTGGGATCGAAAGGCATAATAAAGGGGACAAGACAAT         ]
[+] EMBL CB662176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GGGAATGCTGGCCACTCTGAGCATCCATCCAAAAGCTTGGAGACTGCAGTATACCGGACACCAACACTAATTCCTCCAAGAATCCTGCCTCTCATGAATGACATCGCTCAGCAGCTCATTCAGGCTGGAAATCAGCAGTCATGCTATAAAATTTACAGAGATACCCGTGGATCTGCACTAGAATCGAGCCTTCGGAAATTAGGAGTAGAGAAGCTTAGTAAAGAGGATGTACAGAAGATGCAGTGGGAAGCTTTGGAGGCTAAAATTGGAAACTGGATCCATTTTATGCGAATTGCGGTCAAACTACTACTAGCAGGTGAAAGAAAAATCTGTGACCAGATTTTTGATGGTGTCAACTTTAACAAGGATCAATGTTTTGCTGAACTGACAGCAAATAGTGTCGTGACTCTTCTAAGCTTTGGAGATGCCGTTGCTAAAAGCAAAAGGTCTCCTGAAAAGTTGTTTGTATTGCTAGACATGTACGAAGTAATGCATGAACTTCAACCCGAGATTGAGGTGATTTTCGAAGGAAAATCATGCTCTGAGATGCGGGAGGCTTCATTGGGCTTGGCTAAGCGCTTGGCTCAGACTGCTCAAGAAACCTTTGCTGATTTTGAGGAGGCTGTTGAAAAGGATGCTTCGAAGACTATTGTTAATGATGGAACTGTGCATCCTTTGACTAGCTATGTGATTAATTATGTTAAATTCTTATTTGATTACCAATCGACACTGAAGCTACTATTTCAGGAATTTGAAACTGGTAGTGAGACAGAATCTCAACTTGCTGTTGTTACCATGAGGATAATGCAAGCCCTACAAAATAACTTGGATGGGAAAATCT AACAGTACAGGGATCCTGCATTGACCTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[-] EMBL CB662177             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GCAAAGGATATACTTGGTGATGACTGGATTCAGAGGCACCGTAGAATTGTGCAGCAAAATGCCAATCAGTATAAACGTGTTGCTTGGGCAAAGATTCTCCAGACTCTTTCCATACAAGGTGCGGGCAGCACTGGTTCATCAGATCTTAGCAGCAGTGGGGTTTCAAGAGCTATGATCAAAGAACGGTTTAAATCTTTCAACATGCAATTCGAAGAGCTCCATGCAAAGCAATCTCAGTGGATTGTACCTGATCAGGAATTGCGTGAATCCTTGAGGCTTGCGGTAGCTGAGGTTCTGTTACCAGCCTATCGGTCGTTTGTCAAACGTTTCGGTAACCTTGTTGAGAATGGCAAGAACCCGCACAAATACGTGAGGTACAGCCCAGAGATGGTGGAGCAGCTGTTGGGGGAATTCTTCGAAGGACAGCAATGGGGGGAGCAGAAGCGCTGAGCAGTGAACACTGTCCATGAGCGACAGCACGAGCTCTACCAGTAAGTTGAAGTTGTACATCAGCACGACTTGCAAAGATTTCTTTCCCGGACAAGCAACTAACGATTCTTTGCGTTATAACGTATTGTCATACCGATGCGCTACCGATGTATATATATATAATAGTAACTTCAGTTTGCCTCAGTGCTGAATGCCAAACACGGCAACAGGTGAAGAGGCGTGTATCTCTCTCTGTTCTCACAACACACCGATGTTATTATTGTTTTGTTTTTTTCCCGATCACAGAGTTGTACTCTTCTGTAGAAAATATTGCTTATTGCAGTGAGACTGTACTATTGGGATCGAAAGGCATAATAAAGGGGACAAGACAATGTTATGTTT]


>consensus_8886#0 CCTCTCCCTCCTTCCTCAACCACGTCGCCGACGACCACCACCACCCACCAAATCACGCAT CTCCCCACTCCATTGCCACCGCCTCACGCTTCTACCCCTCTAGAACCTTCCAGAACAATC CAGTATCCCCTCTCCTCGCCTCCTCGAGATCGCGCGGAGAGGGAGGCGGCGTCGTCGCTT GATCTGTCAGGAGGAGGAGGAGGAGGAGGGTAGTGTGAAATCGGGGGATATGGTGGTGGC GGCGGCGGCGAGGCCGCAGACGGCGGAGGCGCTGTCGAAGCGGGCGAGCATGCTGCGGGA CTCGCTGCAGAGGAGCCAGGGGAACACGGACGGGATGGTCACCATCCTCGGATCCTTCGA CCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGAT CCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGATGGCATCCTCTCCCA GTTCGACCTTGCGCGCCGGGCTGAGGCAGCGGTATTGAAGGGTCCTCATGAGGATTTAGA GAGCTACCTGGAGGCAGTGGATCTGCTCAAAGGCATCGTTCGCTTCTTTTCCACAAACAA GAACTTCAAGAGCAGTGAAGGAGTTCTGAATCATGTCAACAACCTGTTGGCTAAGTCTGC TCTGAAAATTGAAGAGGAATTTAGGCAGCTGATGACTACGTACAGCAAACCTATTGAGCC TGATCGTCTCTTTGATTGTCTTCCCAAGTCTCTGCGGCCAACAAAAGATGATCCTGACGC TGATCCAGGGAATGCTGGCCACTCTGAGCATCCATCCAAAAGCTTGGAGACTGCAGTATA CCGGACACCAACACTAATTCCTCCAAGAATCCTGCCTCTCATGAATGACATCGCTCAGCA GCTCATTCAGGCTGGAAATCAGCAGTCATGCTATAAAATTTACAGAGATACCCGTGGATC TGCACTAGAATCGAGCCTTCGGAAATTAGGAGTAGAGAAGCTTAGTAAAGAGGATGTACA GAAGATGCAGTGGGAAGCTTTGGAGGCTAAAATTGGAAACTGGATCCATTTTATGCGAAT TGCGGTCAAACTACTACTAGCAGGTGAAAGAAAAATCTGTGACCAGATTTTTGATGGTGT CAACTTTAACAAGGATCAATGTTTTGCTGAACTGACAGCAAATAGTGTCGTGACTCTTCT AAGCTTTGGAGATGCCGTTGCTAAAAGCAAAAGGTCTCCTGAAAAGTTGTTTGTATTGCT AGACATGTACGAAGTAATGCATGAACTTCAACCCGAGATTGAGGTGATTTTCGAAGGAAA ATCATGCTCTGAGATGCGGGAGGCTTCATTGGGCTTGGCTAAGCGCTTGGCTCAGACTGC TCAAGAAACCTTTGCTGATTTTGAGGAGGCTGTTGAAAAGGATGCTTCGAAGACTATTGT TAATGATGGAACTGTGCATCCTTTGACTAGCTATGTGATTAATTATGTTAAATTCTTATT TGATTACCAATCGACACTGAAGCTACTATTTCAGGAATTTGAAACTGGTAGTGAGACAGA ATCTCAACTTGCTGTTGTTACCATGAGGATAATGCAAGCCCTACAAAATAACTTGGATGG AAAATCTAAACAGTACAGGGATCCTGCATTGACCTACTTATTTCTGATGAATAACATTCA TTATATGGTCAGATCTGTTCGTAGATCAGAAGCAAAGGATATACTTGGTGATGACTGGAT TCAGAGGCACCGTAGAATTGTGCAGCAAAATGCCAATCAGTATAAACGTGTTGCTTGGGC AAAGATTCTCCAGACTCTTTCCATACAAGGTGCGGGCAGCACTGGTTCATCAGATCTTAG CAGCAGTGGGGTTTCAAGAGCTATGATCAAAGAACGGTTTAAATCTTTCAACATGCAATT CGAAGAGCTCCATGCAAAGCAATCTCAGTGGATTGTACCTGATCAGGAATTGCGTGAATC CTTGAGGCTTGCGGTAGCTGAGGTTCTGTTACCAGCCTATCGGTCGTTTGTCAAACGTTT CGGTAACCTTGTTGAGAATGGCAAGAACCCGCACAAATACGTGAGGTACAGCCCAGAGAT GGTGGAGCAGCTGTTGGGGGAATTCTTCGAAGGACAGCAATGGGGGGAGCAGAAGCGCTG AGCAGTGAACACTGTCCATGAGCGACAGCACGAGCTCTACCAGTAAGTTGAAGTTGTACA TCAGCACGACTTGCAAAGATTTCTTTCCCGGACAAGCAACTAACGATTCTTTGCGTTATA ACGTATTGTCATACCGATGCGCTACCGATGTATATATATATAATAGTAACTTCAGTTTGC CTCAGTGCTGAATGCCAAACACGGCAACAGGTGAAGAGGCGTGTATCTCTCTCTGTTCTC ACAACACACCGATGTTATTATTGTTTTGTTTTTTTCCCGATCACAGAGTTGTACTCTTCT GTAGAAAATATTGCTTATTGCAGTGAGACTGTACTATTGGGATCGAAAGGCATAATAAAG GGGACAAGACAATGTTATGTTT



consensusID : consensus_8886#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 780
fasta sequence
                              [GCTGCTCCATCCTCCTTCCGGAACCTTCTAGAAGGTTCTCCTCGTACCACGCGGAGGTGGGGAGATGGGGGTGGCGGAGCTTCCGCGGGTGATGGACGCGCTGGCGCGGCGGGCGAGCACGCTGCGGGACGCGCTGGGGAGGAGCCAGGGGAACACGGAGAGCACGGTCGCCATCCTCGGGTCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGACGCCATCCTCTCCCAGTTCGACCTTGCCCGCCGGGCTGAAGCTACGATACTGAGGGGCCCCCATGAGGATCTGGAGGGCTACCTAGAAGCTGTGGATCTGCTGAAAAGCATTGTTTGCTTCTTCGCCTCGAACAAGAGCCTTAAGAACAACGATGGACTTCTGAATCGCGTCAACAATATATTGTCCAAGTCTGCTCTCAAGATTGAGGAGGAATTCAAGCAGCTGATGACTACATACAGCAAACCTATTGAACCTGATCGCCTATTTGATTGCCTTCCAAAGCCTCCACGAGCACCAAAAGATGACAATGATNGCTGATGGAGGACACACTCACTCTGAACATCCATCCAAAGGCTTGGAGACTGGTATATGTAGGACTCCAACCCTGATGCCCCCAAGAATATTACCACTTCTGCATGATATAGCTCAGCAACTCGTTCAGGCTGGAAATCAGCAGTCATGCTATAGAATCTACAGAGACTCTC]

[+] EMBL CF307435             [GCTGCTCCATCCTCCTTCCGGAACCTTCTAGAAGGTTCTCCTCGTACCACGCGGAGGTGGGGAGATGGGGGTGGCGGAGCTTCCGCGGGTGATGGACGCGCTGGCGCGGCGGGCGAGCACGCTGCGGGACGCGCTGGGGAGGAGCCAGGGGAACACGGAGAGCACGGTCGCCATCCTCGGGTCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGACGCCATCCTCTCCCAGTTCGACCTTGCCCGCCGGGCTGAAGCTACGATACTGAGGGGCCCCCATGAGGATCTGGAGGGCTACCTAGAAGCTGTGGATCTGCTGAAAAGCATTGTTTGCTTCTTCGCCTCGAACAAGAGCCTTAAGAACAACGATGGACTTCTGAATCGCGTCAACAATATATTGTCCAAGTCTGCTCTCAAGATTGAGGAGGAATTCAAG                                                                                                                                                                                                                                                                          ]
[+] EMBL CF322674             [                                                                              GCTTCCGCGGGTGATGGACGCGCTGGCGCGGCGGGCGAGCACGCTGCGGGACGCGCTGGGGAGGAGCCAGGGGAACACGGAGAGCACGGTCGCCATCCTCGGGTCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGACGCCATCCTCTCCCAGTTCGACCTTGCCCGCCGGGCTGAAGCTACGATACTGAGGGGCCCCCATGAGGATCTGGAGGGCTACCTAGAAGCTGTGGATCTGCTGAAAAGCATTGTTTGCTTCTTCGCCTCGAACAAGAGCCTTAAGAACAACGATGGACTTCTGAATCGCGTCAACAATATATTGTCCAAGTCTGCTCTCAAGATTGAGGAGGAATTCAAGCAGCTGATGACTACATACAGCAAACCTATTGAACCTGATCGCCTATTTGATTGCCTTCCAAAGCCTCCACGAGCACCAAAAGATGACAATGATNGCTGATGGAGGACACACTCACTCTGAACATCCATCCAAAGGCTTGGAGACTGGTATATGTAGGACTCCAACCCTGATGCCCCCAAGAATATTACCACTTCTGCATGATATAGCTC                                                         ]
[+] EMBL CF306257             [                                                                                                                                                      GAACACGGAGAGCACGGTCGCCATCCTCGGGTCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGACGCCATCCTCTCCCAGTTCGACCTTGCCCGCCGGGCTGAAGCTACGATACTGAGGGGCCCCCATGAGGATCTGGAGGGCTACCTAGAAGCTGTGGATCTGCTGAAAAGCATTGTTTGCTTCTTCGCCTCGAACAAGAGCCTTAAGAACAACGATGGACTTCTGAATCGCGTCAACAATATATTGTCCAAGTCTGCTCTCAAGATTGAGGAGGAATTCAAGCAGCTGATGACTACATACAGCAAACCTATTGAACCTGATCGCCTATTTGATTGCCTTCCAAAGCCTCCACGAGCACCAAAAGATGACAATGAT GCTGATGGAGGACACACTCACTCTGAACATCCATCCAAAGGCTTGGAGACTGGTATATGTAGGACTCCAACCCTGATGCCCCCAAGAATATTACCACTTCTGCATGATATAGCTCAGCAACTCGTTCAGGCTGGAAATCAGCAGTCATGCTATAGAATCTACAGAGACTCTC]


>consensus_8886#1 GCTGCTCCATCCTCCTTCCGGAACCTTCTAGAAGGTTCTCCTCGTACCACGCGGAGGTGG GGAGATGGGGGTGGCGGAGCTTCCGCGGGTGATGGACGCGCTGGCGCGGCGGGCGAGCAC GCTGCGGGACGCGCTGGGGAGGAGCCAGGGGAACACGGAGAGCACGGTCGCCATCCTCGG GTCCTTCGACCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGAC GCACGCGATCCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGACGCCAT CCTCTCCCAGTTCGACCTTGCCCGCCGGGCTGAAGCTACGATACTGAGGGGCCCCCATGA GGATCTGGAGGGCTACCTAGAAGCTGTGGATCTGCTGAAAAGCATTGTTTGCTTCTTCGC CTCGAACAAGAGCCTTAAGAACAACGATGGACTTCTGAATCGCGTCAACAATATATTGTC CAAGTCTGCTCTCAAGATTGAGGAGGAATTCAAGCAGCTGATGACTACATACAGCAAACC TATTGAACCTGATCGCCTATTTGATTGCCTTCCAAAGCCTCCACGAGCACCAAAAGATGA CAATGATNGCTGATGGAGGACACACTCACTCTGAACATCCATCCAAAGGCTTGGAGACTG GTATATGTAGGACTCCAACCCTGATGCCCCCAAGAATATTACCACTTCTGCATGATATAG CTCAGCAACTCGTTCAGGCTGGAAATCAGCAGTCATGCTATAGAATCTACAGAGACTCTC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8886#0      CCTCTCCCTCCTTCCTCAACCACGTCGCCGACGACCACCACCACCCACCAAATCACGCAT 60
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CTCCCCACTCCATTGCCACCGCCTCACGCTTCTACCCCTCTAGAACCTTCCAGAACAATC 120
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CAGTATCCCCTCTCCTCGCCTCCTCGAGATCGCGCGGAGAGGGAGGCGGCGTCGTCGCTT 180
consensus_8886#1      --------------------------------------------------GCTGCTCCAT 10
                                                                        *  *   * *

consensus_8886#0      GATCTGTCAGGAGGAGGAGGAGGAGGAGGGTAGTGTGAAATCGGGGGATATGGTGGTGGC 240
consensus_8886#1      CCTCCTTCCGGAACCTTCT-AGAAGGTTCTCCTCGTACCACGCGGAGGTGGGGAGATGGG 69
                        **  ** ***        ** ***        **   *   ** * *  ** * *** 

consensus_8886#0      GGCGGCGGCGAGGCCGCAGACGGCGGAGGCGCTGTCGAAGCGGGCGAGCATGCTGCGGGA 300
consensus_8886#1      GGTGGCGGAGCTTCCGCGGGTGATGGACGCGCTGGCGCGGCGGGCGAGCACGCTGCGGGA 129
                      ** ***** *   **** *  *  *** ****** **  *********** *********

consensus_8886#0      CTCGCTGCAGAGGAGCCAGGGGAACACGGACGGGATGGTCACCATCCTCGGATCCTTCGA 360
consensus_8886#1      CGCGCTGGGGAGGAGCCAGGGGAACACGGAGAGCACGGTCGCCATCCTCGGGTCCTTCGA 189
                      * *****  *********************  * * **** ********** ********

consensus_8886#0      CCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGAT 420
consensus_8886#1      CCACCGCCTCTCCGCGCTCGAGGCCGCCATGCGCCCCACCCAGGTGAGGACGCACGCGAT 249
                      ************************************************************

consensus_8886#0      CCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGATGGCATCCTCTCCCA 480
consensus_8886#1      CCGGATGGCGCACGAGAACATCGACAAGACGATCAAGGCCGCCGACGCCATCCTCTCCCA 309
                      ********************************************* * ************

consensus_8886#0      GTTCGACCTTGCGCGCCGGGCTGAGGCAGCGGTATTGAAGGGTCCTCATGAGGATTTAGA 540
consensus_8886#1      GTTCGACCTTGCCCGCCGGGCTGAAGCTACGATACTGAGGGGCCCCCATGAGGATCTGGA 369
                      ************ *********** **  ** ** *** *** ** ********* * **

consensus_8886#0      GAGCTACCTGGAGGCAGTGGATCTGCTCAAAGGCATCGTTCGCTTCTTTTCCACAAACAA 600
consensus_8886#1      GGGCTACCTAGAAGCTGTGGATCTGCTGAAAAGCATTGTTTGCTTCTTCGCCTCGAACAA 429
                      * ******* ** ** *********** *** **** *** *******  ** * *****

consensus_8886#0      GAACTTCAAGAGCAGTGAAGGAGTTCTGAATCATGTCAACAACCTGTTGGCTAAGTCTGC 660
consensus_8886#1      GAGCCTTAAGAACAACGATGGACTTCTGAATCGCGTCAACAATATATTGTCCAAGTCTGC 489
                      ** * * **** **  ** *** *********  ********  * *** * ********

consensus_8886#0      TCTGAAAATTGAAGAGGAATTTAGGCAGCTGATGACTACGTACAGCAAACCTATTGAGCC 720
consensus_8886#1      TCTCAAGATTGAGGAGGAATTCAAGCAGCTGATGACTACATACAGCAAACCTATTGAACC 549
                      *** ** ***** ******** * *************** ***************** **

consensus_8886#0      TGATCGTCTCTTTGATTGTCTTCCCAAGTCTCTGCGGCCAACAAAAGATGATCCTGA-CG 779
consensus_8886#1      TGATCGCCTATTTGATTGCCTTCCAAAGCCTCCACGAGCACCAAAAGATGACAATGATNG 609
                      ****** ** ******** ***** *** ***  **  ** **********   ***  *

consensus_8886#0      CTGATCCAGGGAATGCTGGCCACTCTGAGCATCCATCCAAAAGCTTGGAGACTGCAGTAT 839
consensus_8886#1      CTGATGGAGGACACACT---CACTCTGAACATCCATCCAAAGGCTTGGAGACTGGTATAT 666
                      *****  ***  *  **   ******** ************ ************   ***

consensus_8886#0      ACCGGACACCAACACTAATTCCTCCAAGAATCCTGCCTCTCATGAATGACATCGCTCAGC 899
consensus_8886#1      GTAGGACTCCAACCCTGATGCCCCCAAGAATATTACCACTTCTGCATGATATAGCTCAGC 726
                         **** ***** ** ** ** ********  * ** **  ** **** ** *******

consensus_8886#0      AGCTCATTCAGGCTGGAAATCAGCAGTCATGCTATAAAATTTACAGAGATACCCGTGGAT 959
consensus_8886#1      AACTCGTTCAGGCTGGAAATCAGCAGTCATGCTATAGAATCTACAGAGACTCTC------ 780
                      * *** ****************************** *** ********  * *      

consensus_8886#0      CTGCACTAGAATCGAGCCTTCGGAAATTAGGAGTAGAGAAGCTTAGTAAAGAGGATGTAC 1019
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      AGAAGATGCAGTGGGAAGCTTTGGAGGCTAAAATTGGAAACTGGATCCATTTTATGCGAA 1079
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TTGCGGTCAAACTACTACTAGCAGGTGAAAGAAAAATCTGTGACCAGATTTTTGATGGTG 1139
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TCAACTTTAACAAGGATCAATGTTTTGCTGAACTGACAGCAAATAGTGTCGTGACTCTTC 1199
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TAAGCTTTGGAGATGCCGTTGCTAAAAGCAAAAGGTCTCCTGAAAAGTTGTTTGTATTGC 1259
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TAGACATGTACGAAGTAATGCATGAACTTCAACCCGAGATTGAGGTGATTTTCGAAGGAA 1319
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      AATCATGCTCTGAGATGCGGGAGGCTTCATTGGGCTTGGCTAAGCGCTTGGCTCAGACTG 1379
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CTCAAGAAACCTTTGCTGATTTTGAGGAGGCTGTTGAAAAGGATGCTTCGAAGACTATTG 1439
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TTAATGATGGAACTGTGCATCCTTTGACTAGCTATGTGATTAATTATGTTAAATTCTTAT 1499
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TTGATTACCAATCGACACTGAAGCTACTATTTCAGGAATTTGAAACTGGTAGTGAGACAG 1559
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      AATCTCAACTTGCTGTTGTTACCATGAGGATAATGCAAGCCCTACAAAATAACTTGGATG 1619
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      GAAAATCTAAACAGTACAGGGATCCTGCATTGACCTACTTATTTCTGATGAATAACATTC 1679
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      ATTATATGGTCAGATCTGTTCGTAGATCAGAAGCAAAGGATATACTTGGTGATGACTGGA 1739
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TTCAGAGGCACCGTAGAATTGTGCAGCAAAATGCCAATCAGTATAAACGTGTTGCTTGGG 1799
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CAAAGATTCTCCAGACTCTTTCCATACAAGGTGCGGGCAGCACTGGTTCATCAGATCTTA 1859
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      GCAGCAGTGGGGTTTCAAGAGCTATGATCAAAGAACGGTTTAAATCTTTCAACATGCAAT 1919
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TCGAAGAGCTCCATGCAAAGCAATCTCAGTGGATTGTACCTGATCAGGAATTGCGTGAAT 1979
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CCTTGAGGCTTGCGGTAGCTGAGGTTCTGTTACCAGCCTATCGGTCGTTTGTCAAACGTT 2039
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TCGGTAACCTTGTTGAGAATGGCAAGAACCCGCACAAATACGTGAGGTACAGCCCAGAGA 2099
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TGGTGGAGCAGCTGTTGGGGGAATTCTTCGAAGGACAGCAATGGGGGGAGCAGAAGCGCT 2159
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      GAGCAGTGAACACTGTCCATGAGCGACAGCACGAGCTCTACCAGTAAGTTGAAGTTGTAC 2219
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      ATCAGCACGACTTGCAAAGATTTCTTTCCCGGACAAGCAACTAACGATTCTTTGCGTTAT 2279
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      AACGTATTGTCATACCGATGCGCTACCGATGTATATATATATAATAGTAACTTCAGTTTG 2339
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CCTCAGTGCTGAATGCCAAACACGGCAACAGGTGAAGAGGCGTGTATCTCTCTCTGTTCT 2399
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      CACAACACACCGATGTTATTATTGTTTTGTTTTTTTCCCGATCACAGAGTTGTACTCTTC 2459
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      TGTAGAAAATATTGCTTATTGCAGTGAGACTGTACTATTGGGATCGAAAGGCATAATAAA 2519
consensus_8886#1      ------------------------------------------------------------
                                                                                  

consensus_8886#0      GGGGACAAGACAATGTTATGTTT 2542
consensus_8886#1      -----------------------
                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)