These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_8894#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2276 fasta sequence [TCCTCCTCCTGCTGCTGCGTTGCTCCCCTACCTAACCCCCTCTCTCTCCCTCATCTCGCTCCTCCTGCTGCTAGCTAATGCTGTATTTATTCCCACCACCTCCTCCCACTCTTCGTGCCTCGCCGGAGCAAGCAGTACCAGTGCACTGTTGGTTCGCTAGCAAGTCGGCATTAATCCGAGAGTGTGCATGCACCGGAGGAAGCTAGGTTAGCTTTGTTCCGGCCATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGAC-GGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGT-GCGCGGTGCGCGCCGGCG-CGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACA-TCA-CGGA-GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA-AACTTGGCAACTTTTTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATCAAAAAAA] [+] EMBL AK105636 [TCCTCCTCCTGCTGCTGCGTTGCTCCCCTACCTAACCCCCTCTCTCTCCCTCATCTCGCTCCTCCTGCTGCTAGCTAATGCTGTATTTATTCCCACCACCTCCTCCCACTCTTCGTGCCTCGCCGGAGCAAGCAGTACCAGTGCACTGTTGGTTCGCTAGCAAGTCGGCATTAATCCGAGAGTGTGCATGCACCGGAGGAAGCTAGGTTAGCTTTGTTCCGGCCATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGCCTCCGGCGTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGGAAGGCTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGAC GGGCTTGCCCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCAGCAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGT GCGCGGTGCGCGCCGGCG CGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTGGCGGCCGTCGTGCCGCCGCTCGTGCTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCGGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCGACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCGCTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACA TCA CGGA GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA AACTTGGCAACTTTTTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATC ] [+] EMBL OS4CL2R [ CATGATCACGGTGGCGGCACCGGAGGCGCAGCCGCAGGTGGCGGCGGCGGTCGATGAGGCGCCGCCGGAGGCGGTGACGGTGTTCCGGTCCAAGCTTCCGGACATCGACATCCCCAGCCACCTGCCCCTGCACGAGTACTGCTTCGCCAGGGCGGCCGAGCTCCCCGACGCGCCGTGCCTCATCGCGGCGGCCACGGGGAGGACGTACACGTTCGCCGAGACGCGCCTGCTGTGCCGCAGGGCCGCCGCGGCGCTGCACCGGCTGGGCGTCGGCCACGGCGACCGCGTCATGGTGCTGCTCCAGAACTGCGTGGAGTTCGCCGTGGCGTTCTTCGCCGCGTCGTTCCTCGGCGCGGTCACCACCGCCGCCAACCCGTTCTGCACGCCGCAGGAGATCCACAAGCAGTTCAAGGGCTCCGGCGTGAAGCTCATCCTCACCCAGTCCGTCTACGTCGACAAGCTCCGGCAGCACGAGGCGTTCCCAAGGATCGACGCCTGCACCGTCGGCGACGACACGCTCACCGTGATCACCATCGACGACGACGAGGCGACGCCGAAAGCGTGCCTGCCGTTCTGGGACCTGATCGCGGACGCCGACGAGGGGTCCGTCCCGGAGGTGGCCATCTCGCCGGACGACCCCGTGGCGCTGCCGTTCTCGTCGGGCACGACGGGGCTTG CCAAGGGCGTGGTGCTGACGCACAGGAGCGTCGTGTCGGGCGTGGCGCACGAGGTGGACGGCGAGAACCCGAACCTGCACATGGGTGCCGGCGACGTGGCGCTGTGCGTGCTGCCGCTGTTCCACATCTTCTCGCTCAACTCCGTGCTGCTGTCGCG GGTGCG GCCGGCGCCGGCGGTGGCGCTGATGCCCAGGTTCGAGATGGGCGCCATGCTGGGGGCCATCGAGCGGTGGCGCGTGACGGTCGGGGCCGTCGTGCCGCCGCTCGTCGTCGCGCTCGCCAAGAACCCGTTCGTGGAGCGCCACGACCTCAGCTCCATCCGCATCGTGCTCTCCGGCGCCGCCCCGCTCGGCAAGGAGCTCGAGGACGCCCTCCGCGCCCGCCTGCCTCAGGCCATCTTCGGACAGGGATACGGGATGACGGAGGCGGGGCCGGTGCTGTCGATGTGCCCCGCGTTCGCCAAGGAGCCGACGCCGGCGAAGTCCGGGTCGTGCGGGACGGTGGTGCGGAACGCGGAGCTCAAGGTGGTCGACCCGGACACGGGCTTCTCCCTCGGCCGCAACCTCCCCGGCGAGATCTGCATCCGCGGCCCACAGATCATGAAAGGTTACCTGAACGATCCCGAGGCGACCGCCGCGACGATCGACGTCGAGGGGTGGCTGCACACCGGCAACATCGGCTACGTCGACGACGACGACGAGGTCTTCATCGTCGACCGTGTCAAGGAGCTCATCAAATTCAAGGGGTTCCAGGTGCCGCCGGCCGAGCTGGAGTCGCTGCTCATCGCTCACCCGTCCATCCGTGACGCCGCCGTCGTCCCGCAAAAGGATGACGTCGCCGGCGAGGTCCCGGTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACA TCA CGGA GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTAT ] [+] EMBL BI806812 [ AGTTCCC GTCGCGTTCGTGGTCCGCGCCGCCGACTCCGACATTCATCGGAGGGAGTCCATCAAGGAATTCATATCCAA CAGGTGGTGTTNTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAGCCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA AACTTGGCAACTTTTTAGTATATGATCNAAAC AACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCAAAAAAAAAA] [+] EMBL BM421059 [ GTTCGTGGTCCGCGCCGCCGACTCCGACA TCA CGGA GGAGTCCATCAAGGAATTCATATCCAAGCAGGTGGTGTTCTACAAGAGGCTACACAAGGTGCACTTCATCCATGCGATCCCCAAGTCGGCGTCTGGGAAGATACTGAGGAGAGAGCTCAGAACCAAGCTCGCGGCGTGCTGACCATGTCAATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAATGCAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCATAACTTGGCAACTTTTTAGTATATGATC AAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTAaaaaaaaaa ] [+] EMBL BM038450 [ TACTGAGGAGAGAGCTCAGAACCAAGCTCGCGGCGTGCTGACCATGTCCATGATGGATAATGATGGCTAGGCTATACATGCGTTCTACTATGTATTACTCTGAAAAT CAGTGAAGTTCTGGTTGATTTGTGGTCGTATTTGTGACGAGATTTATTTTCTGAGAAAAAAAAGTTTATTCTTTTTGCTA CC GTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACT C GCC AACTT GCAACTTTTTAGTATATGA C AAACCAACGTGTACCATGTA C TTTGTACGTGTTGTT CC GTTGGGGAATACGACTACC TGTATTGGATTCATGATTTAaaaaaaaa ] [+] EMBL AK060627 [ AAGTTTATTCTTTTTGCTAGCCAGTATACTGCTGAATTTGATGCCAGGCGCACATTTGCGAAAGAAACTGCGGCA AACTTGGCAACTTTTTAGTATATGATCAAAACAAACGTGTACAATGTAGCATTTGTACGTGTTGTTGCCAGTTGGGGAATACGACTACCGTGTATTGGATTCATGATTTACATATATCAGTATTGGTTCATC ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||