cluster # 8903

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Oryza sativa
cluster # 8903 cluster # 8903 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8903#0 length = 1737 sequences # 6
consensusID : consensus_8903#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1737
fasta sequence
                              [CATGTCCCGGCCTCCCGGGCGACACAGAGAAGAAAAAACGAAACAGCCGAGATGGAGAACGCACCGGCCACCACCACCT-CCTCCACCCAAGACGGCGGCGGCGGCGCCGGCGGCCATGTCTTCCTCCTCGCTTTCCCCGAGGCGCAAGGCCACGTCAACCCGATCCTGCAGTTCGGCCGCCACCTCGCGGCGCACCACGGCTTCCTCCCCACGCTCGTCACCACCCGCCACGTTCTCTCCACCGTCCCGCCCCCTCTCGCCCCCTTCCGCGTCGCCGCCATCTCCGACGGCTTCGACTCCGGCGGCATGGCGGCCTGCGGGGACGCCAGGGAGTACACCCGGCGGCTGGCGGATGTGGGCTCGGAGACCCTGGGTGTCCTCCTCCGCTCCGAGGCCGCCGCGGGGAGGCCGCCCCGCGTGCTGGTGTACGACCCGCACCTCCCGTGGGCGGGGCGCGTGGCGCGCGGCGCTGGGGTGCCAGCCGCCGCGTTCTTCTCGCAGCCGTGCGCCGTGGACGTCATCTACGGGGAGGTCTGGGCGGGGCGCGTTGGGTTGCCCGTCGTGGACGGGGGCGCGCTCCGGGGGTTGCTGAGCGTGGAGCTCGGGCCGGAGGACGTGCCGTCGTTCGTGAAGGCGCCGGAGTCGTACCCGCCGTTCCTGGAGGCGGTGCTGGGCCAGTTCGACGGGCTGGAGGACGCCGACGACGTGCTCGTCAATTCTTTCCAAGAATTGGAGCCGAAGGAGGCAGATTACTTGGCATCAGCATGGCGTTTTAAGACGATTGGTCCGACCGTACCATCCTTCTACTTGGATGACGATCGCTTACAACCAAACAAGAACTATGGGTTCAACATTTCTGACAGCACTTCACCTTGCTTGGCGTGGCTAGATAATCAGCCCCCTTGCTCTGTTGTCTATGCTTCCTATGGGACTGTTGCTGATCTTGACCCAACTCAGTTAGATGAGCTGGGCAATGGATTTTGCAATTCCGGTAAACCGTTCCTTTGGGTCGTGAGGTCCTGTGATGAACACAAGCTATCAGAAGAACTCCGTGACAAGTGCAAGGAGAGGGGCCTAATCGTTTCTTGGTGTCCCCAGCTTGAGGTCTTATCTCACAAAGCCACAGGCTGTTTCTTAACTCACTGTGGATGGAACTCAACAACAGAAGCAATTGTTACTGGCGTTCCACTGTTAGCGATGCCTCAGTGGACAGACCAACCAACTACAGCGAAGTACATTGAAAGTGCATGGGGAAATGGTGTACGCGTACATCGGGACAAGGAAGGCATGGTGAGAAAAGAAGAGGTGGAGAGATGCATCAGAGAGGTTCTAG-AGAGTGAGAGGAAGGCAGAGTACAGGA-AAAA-TGCT-AATAG-GTGGATGAAGAAAGCTAAGGAAG-CCATGAAGAAAGGAGGGA-GCTCGAATAAGAATATTGCTGAGTTT-GCCTCGAAGTACGCTTCATATT-GACATGGAATAGTTTTCAT-CCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCT-CCTATGGAATAGTTTTCATCCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATGGTA-TTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATTATAGTTTGCTCAACGAT-ATTTGGACATTTAAAGCAATTACTTTGTCTTCCC]

[+] EMBL AK105967             [CATGTCCCGGCCTCCCGGGCGACACAGAGAAGAAAAAACGAAACAGCCGAGATGGAGAACGCACCGGCCACCACCACCT CCTCCACCCAAGACGGCGGCGGCGGCGCCGGCGGCCATGTCTTCCTCCTCGCTTTCCCCGAGGCGCAAGGCCACGTCAACCCGATCCTGCAGTTCGGCCGCCACCTCGCGGCGCACCACGGCTTCCTCCCCACGCTCGTCACCACCCGCCACGTTCTCTCCACCGTCCCGCCCCCTCTCGCCCCCTTCCGCGTCGCCGCCATCTCCGACGGCTTCGACTCCGGCGGCATGGCGGCCTGCGGGGACGCCAGGGAGTACACCCGGCGGCTGGCGGATGTGGGCTCGGAGACCCTGGGTGTCCTCCTCCGCTCCGAGGCCGCCGCTGGGAGGCCGCCCCGCGTGCTGGTGTACGACCCGCACCTCCCGTGGGCGGGGCGCGTGGCGCGCGGCGCTGGGGTGCCAGCCGCCGCGTTCTTCTCGCAGCCGTGCGCCGTGGACGTCATCTACGGGGAGGTCTGGGCGGGGCGCGTTGGGTTGCCCGTCGTGGACGGGGGCGCGCTCCGGGGGTTGCTGAGCGTGGAGCTCGGGCCGGAGGACGTGCCGTCGTTCGTGAAGGCGCCGGAGTCGTACCCGCCGTTCCTGGAGGCGGTGCTGGGCCAGTTCGACGGGCTGGAGGACGCCGACGACGTGCTCGTCAATTCTTTCCAAGAATTGGAGCCGAAGGAGGCAGATTACTTGGCATCAGCATGGCGTTTTAAGACGATTGGTCCGACCGTACCATCCTTCTACTTGGATGACGATCGCTTACAACCAAACAAGAACTATGGGTTCAACATTTCTGACAGCACTTCACCTTGCTTGGCGTGGCTAGATAATCAGCCCCCTTGCTCTGTTGTCTATGCTTCCTATGGGACTGTTGCTGATCTTGACCCAACTCAGTTAGATGAGCTGGGCAATGGATTTTGCAATTCCGGTAAACCGTTCCTTTGGGTCGTGAGGTCCTGTGATGAACACAAGCTATCAGAAGAACTCCGTGACAAGTGCAAGGAGAGGGGCCTAATCGTTTCTTGGTGTCCCCAGCTTGAGGTCTTATCTCACAAAGCCACAGGCTGTTTCTTAACTCACTGTGGATGGAACTCAACAACAGAAGCAATTGTTACTGGCGTTCCACTGTTAGCGATGCCTCAGTGGACAGACCAACCAACTACAGCGAAGTACATTGAAAGTGCATGGGGAAATGGTGTACGCGTACATCGGGACAAGGAAGGCATGGTGAGAAAAGAAGAGGTGGAGAGATGCATCAGAGAGGTTCTAG AGAGTGAGAGGAAGGCAGAGTACAGGA AAAA TGCT AATAG GTGGAT AAGAAAGCTAAGGAAG CCATGAAGAAAGGAGGGA GCTCGAATAAGAATATTGCTGAGTTT GCCTCGAAGTACGCTTCATATT GACATGGAATAGTTTTCAT CCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCT CCTATGGAATAGTTTTCATCCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCT                                                                                                ]
[+] EMBL AK103242             [                                 AAAAACGAAACAGCCGAGATGGAGAACGCACCGGCCACCACCACCT CCTCCACCCAAGACGGCGGCGGCGGCGCCGGCGGCCATGTCTTCCTCCTCGCTTTCCCCGAGGCGCAAGGCCACGTCAACCCGATCCTGCAGTTCGGCCGCCACCTAGCGGCGCACCACGGCTTCCTCCCCACGCTCGTCACCACCCGCCACGTTCTCTCCACCGTCCCGCCCCCTCTCGCCCCCTTCCGCGTCGCCGCCATCTCCGACGGCTTCGACTCCGGCGGCATGGCGGCCTGCGGGGACGCCAGGGAGTACACCCGGCGGCTGGCGGATGTGGGCTCGGAGACCCTGGGTGTCCTCCTCCGCTCCGAGGCCGCCGCGGGGAGGCCGCCCCGCGTGCTGGTGTACGACCCGCACCTCCCGTGGGCGGGGCGCGTGGCGCGCGGCGCTGGGGTGCCAGCCGCCGCGTTCTTCTCGCAGCCGTGCGCCGTGGACGTCATCTACGGGGAGGTCTGGGCGGGGCGCGTTGGGTTGCCCGTCGTGGACGGGGGCGCGCTCCGGGGGTTGCTGAGCGTGGAGCTCGGGCCGGAGGACGTGCCGTCGTTCGTGAAGGCGCCGGAGTCGTACCCGCCGTTCCTGGAGGCGGTGCTGGGCCAGTTCGACGGGCTGGAGGACGCCGACGACGTGCTCGTCAATTCTTTCCAAGAATTGGAGCCGAAGGAGGCAGATTACTTGGCATCAGCATGGCGTTTTAAGACGATTGGTCCGACCGTACCATCCTTCTACTTGGATGACGATCGCTTACAACCAAACAAGAACTATGGGTTCAACATTTCTGACAGCACTTCACCTTGCTTGGCGTGGCTAGATAATCAGCCCCCTTGCTCTGTTGTCTATGCTTCCTATGGGACTGTTGCTGATCTTGACCCAACTCAGTTAGATGAGCTGGGCAATGGATTTTGCAATTCCGGTAAACCGTTCCTTTGGGTCGTGAGGTCCTGTGATGAACACAAGCTATCAGAAGAACTCCGTGACAAGTGCAAGGAGAGGGGCCTAATCGTTTCTTGGTGTCCCCAGCTTGAGGTCTTATCTCACAAAGCCACAGGCTGTTTCTTAACTCACTGTGGATGGAACTCAACAACAGAAGCAATTGTTACTGGCGTTCCACTGTTAGCGATGCCTCAGTGGACAGACCAACCAACTACAGCGAAGTACATTGAAAGTGCATGGGGAAATGGTGTACGCGTACATCGGGACAAGGAAGGCATGGTGAGAAAAGAAGAGGTGGAGAGATGCATCAGAGAGGTTCTAG AGAGTGAGAGGAAGGCAGAGTACAGGA AAAA TGCT AATAG GTGGATGAAGAAAGCTAAGGAAG CCATGAAGAAAGGAGGGA GCTCGAATAAGAATATTGCTGAGTTT GCCTCGAAGTACGCTTCATATT GACATGGAATAGTTTTCAT CCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCT CCTATGGAATAGTTTTCATCCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATGTTA TTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATTATAGTTTGCTCAACGAT ATTTGGA                           ]
[+] EMBL C28196               [                                                                    CACCACCACCTGACTCCACCCAAGANGGNGGNGGAGGCG CGGCGGCCATGTCTTCCTCCTCGCTTTCCCCGAGGCGCAAGGCCACGTCAACCCGATCCTGCAGTTCGGCCGCCACCTCGCGGCGCACCACGGCTTCCTCCCCACGCTCGTCACCACCCGCCACGTTCTCTCCACCGTCCCGCCCCCTCTNGCCCCCTTCCGCGTCGCCGCCATCTCCGACGGCTTCGACTCCGGCGGCATGGCGGCCTNCGGGGACG CAGGAAGTACAACCGGCGGCTGGCGGATGTGGGCTCGGAGAACC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB672601             [                                                                       CACCACCT CCTCCACCCAAGACGGCGGCGGCGGCGCCGGCGGCCATGTCTTCCTCCTCGCTTTCCCCGAGGCGCAAGGCCACGTCAACCCGATCCTGCAGTTCGGCCGCCACCTCGCGGCGCACCACGGCTTCCTCCCCACGCTCGTCACCACCCGCCACGTTCTCTCCACCGTCCCGCCCCCTCTCGCCCCCTTCCGCGTCGCCGCCATCTCCGACGGCTTCGACTCCGGCGGCATGGCGGCCTGCGGGGACGCCAGGGAGTACACCCGGCGGCTGGCGGATGTGGGCTCGGAGACCCTGGGTGTCCTCCTCCGCTCCGAGGCCGCCGCGGGGAGGCCGCCCCGCGTGCTGGTGTACGACCCGCACCTCCCGTGGGCGGGGCGCGTGGCGCGCGGCGCTGGGGTGCCAGCCGCCGCGTTCTTCTCGCAGCCGTGCGCCGTGGACGTCATCTACGGGGAGGTCTGGGCGGGGCGCGTTGGGTTGCCCGTCGTGGACGGGGGCGCGCTCCGGGGGTTGCTGAGCGTGGAGCTCGGGCCGGAGGACGTGCCGTCGTTCGTGAAGGCGCCGGAGTCGTACCCGCCGTTCCTGGAGGCAGTGCTGGGCCAGTTCGACGGGCTGGAAGACGCCGACGACGTGCTCGTCAA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[-] EMBL CB672602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         AATTCCGGTAAACCGTTCCTTTGGGTCGTGAGGTCCTGTGATGAACACAAGCTATCAGAAGAACTCCGTGACAAGTGCAAGGAGAGGGGCCTAATCGTTTCTTGGTGTCCCCAGCTTGAGGTCTTATCTCACAAAGCCACAGGCTGTTTCTTAACTCACTGTGGATGGAACTCAACAACAGAAGCAATTGTTACTGGCGTTCCACTGTTAGCGATGCCTCAGTGGACAGACCAACCAACTACAGCGAAGTACATTGAAAGTGCATGGGGAAATGGTGTACGCGTACATCGGGACAAGGAAGGCATGGTGAGAAAAGAAGAGGTGGAGAGATGCATCAGAGAGGTTCTAG AGAGTGAGAGGAAGGCAGAGTACAGGA AAAA TGCT AATAG GTGGATGAAGAAAGCTAAGGAAG CCATGAAGAAAGGAGGGA GCTCGAATAAGAATATTGCTGAGTTT GCCTCGAAGTACGCTTCATATT GACATGGAATAGTTTTCAT CCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCT CCTATGGAATAGTTTTCATCCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATGGTA TTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATTATAGTTTGCTCAACGAT ATTTGGACATTTAAAGCAATTACTTTGTCTTCCC]
[+] EMBL BI806569             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAGATGCATCAGAGAGGTTCTAGTAGAGTGAGAGGAAGGCAGAGTACAGGATAAAATTTCTNTATAGTGTGGATGAAGAAAGCTAAGGAAGCCCATGAAGAAAGGAGGGATGCTCGAATAAGAATATT CTGAGTTTGGCCTCGAAGTACGCTTCATATTGGACATGGAATAGTTTTCATGCCAGCNACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCCCCCGGAATAGTTTTCATCCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATGNTAGTGACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATTATAGTTTGCTCAACGATNCCTTGGACAaaaaaaa                  ]




>consensus_8903#0
CATGTCCCGGCCTCCCGGGCGACACAGAGAAGAAAAAACGAAACAGCCGAGATGGAGAAC
GCACCGGCCACCACCACCTCCTCCACCCAAGACGGCGGCGGCGGCGCCGGCGGCCATGTC
TTCCTCCTCGCTTTCCCCGAGGCGCAAGGCCACGTCAACCCGATCCTGCAGTTCGGCCGC
CACCTCGCGGCGCACCACGGCTTCCTCCCCACGCTCGTCACCACCCGCCACGTTCTCTCC
ACCGTCCCGCCCCCTCTCGCCCCCTTCCGCGTCGCCGCCATCTCCGACGGCTTCGACTCC
GGCGGCATGGCGGCCTGCGGGGACGCCAGGGAGTACACCCGGCGGCTGGCGGATGTGGGC
TCGGAGACCCTGGGTGTCCTCCTCCGCTCCGAGGCCGCCGCGGGGAGGCCGCCCCGCGTG
CTGGTGTACGACCCGCACCTCCCGTGGGCGGGGCGCGTGGCGCGCGGCGCTGGGGTGCCA
GCCGCCGCGTTCTTCTCGCAGCCGTGCGCCGTGGACGTCATCTACGGGGAGGTCTGGGCG
GGGCGCGTTGGGTTGCCCGTCGTGGACGGGGGCGCGCTCCGGGGGTTGCTGAGCGTGGAG
CTCGGGCCGGAGGACGTGCCGTCGTTCGTGAAGGCGCCGGAGTCGTACCCGCCGTTCCTG
GAGGCGGTGCTGGGCCAGTTCGACGGGCTGGAGGACGCCGACGACGTGCTCGTCAATTCT
TTCCAAGAATTGGAGCCGAAGGAGGCAGATTACTTGGCATCAGCATGGCGTTTTAAGACG
ATTGGTCCGACCGTACCATCCTTCTACTTGGATGACGATCGCTTACAACCAAACAAGAAC
TATGGGTTCAACATTTCTGACAGCACTTCACCTTGCTTGGCGTGGCTAGATAATCAGCCC
CCTTGCTCTGTTGTCTATGCTTCCTATGGGACTGTTGCTGATCTTGACCCAACTCAGTTA
GATGAGCTGGGCAATGGATTTTGCAATTCCGGTAAACCGTTCCTTTGGGTCGTGAGGTCC
TGTGATGAACACAAGCTATCAGAAGAACTCCGTGACAAGTGCAAGGAGAGGGGCCTAATC
GTTTCTTGGTGTCCCCAGCTTGAGGTCTTATCTCACAAAGCCACAGGCTGTTTCTTAACT
CACTGTGGATGGAACTCAACAACAGAAGCAATTGTTACTGGCGTTCCACTGTTAGCGATG
CCTCAGTGGACAGACCAACCAACTACAGCGAAGTACATTGAAAGTGCATGGGGAAATGGT
GTACGCGTACATCGGGACAAGGAAGGCATGGTGAGAAAAGAAGAGGTGGAGAGATGCATC
AGAGAGGTTCTAGAGAGTGAGAGGAAGGCAGAGTACAGGAAAAATGCTAATAGGTGGATG
AAGAAAGCTAAGGAAGCCATGAAGAAAGGAGGGAGCTCGAATAAGAATATTGCTGAGTTT
GCCTCGAAGTACGCTTCATATTGACATGGAATAGTTTTCATCCAGCTACCAAGGTATTTT
ATTTAGATCTCTGGTTATGATTACAATAATGGAGGGAGAAAGTTTAGTTCTCCTATGGAA
TAGTTTTCATCCAGCTACCAAGGTATTTTATTTAGATCTCTGGTTATGATTACAATAATG
GAGGGAGAAAGTTTAGTTCTCCTATGGTATTACAATAATGGAGGGAGAAAGTTTAGTTCT
CCTATTATAGTTTGCTCAACGATATTTGGACATTTAAAGCAATTACTTTGTCTTCCC
clustalw multiple alignements is not computed in this case