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Oryza sativa
cluster # 8953 cluster # 8953       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8953#0 length = 1034 sequences # 3  
consensus_8953#1 length = 792 sequences # 1  
consensus_8953#2 length = 615 sequences # 1  
consensus_8953#3 length = 440 sequences # 1  

consensusID : consensus_8953#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1034
fasta sequence
                              [GCATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTGACAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTGTTGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAAAGGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTTCACCTGTGACAATGAAACACTTCTGGCAAATCCTACACAGCTCCTTGATGTGAGAACTACGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGGTTTGAG-CCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTCAGAGTTACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTT-AAACCGTGAAATATATATAAGC-GGAGAAAAGGAAATCATGTACATACGAGTTTGGCAGTCTTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGCTGGTTTATGAGCTACATCCAGCA-TTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAG-TTTGTGAATATAATCCGTAAATATTTGTGGATGGTTATCTTCAAAAAAAAAAA]

[+] EMBL CA767601             [GCATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTGACAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTGTTGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAAAGGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTTCACCTGTGACAATGAAACACTTCTGGCAAATCCTACACAGCTCCTTGATGTGAGAACTACGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGGTTTGAG CCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTCAGAGTTACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATCTAAGCCCAANGCGTATAGAGGATGGAGGACATTGTCTTATGNTATAGGATGGATATTCTACACCAAGAAGATTGNTGCTATGAAAAGAAATGAACATGGGAAATAACGNTTTCGNTCACATGGTTATTNCTGGGGNTGGTTAGTTNAACCCGGGAAATTNTTNTAAGCGGGGGAAAAGGAAATCATGTCCCTACCAGTTTGGCAGT                                                                                                                                                                  ]
[-] EMBL CB628369             [                                                                                                                                                                                                         CAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTTCACCTGTGACAATGAAACACTTCTGGCAAATCCTTCACAGCTCCTTGATGTGAGAACTACGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGGTTTGAG CCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTCAGAGTTACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTT AAACCGTGAAATATATATAAGC GGAGAAAAGGAAATCATGTACATACGAGTTTGGCAGTCTTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGCTGGTTTATGAGCTACATCCAGCA TTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAG TTTGTGAATATAATCCGTAAATATTTGTGGATG                    ]
[-] EMBL CA760380             [                                                                                                                                                                                                                                                                                                                                                      TTTCTACCGATGG TTTGG TTGAGNCCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTCAGAGTTACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTT AAACCGTGAAATATATATAAGC GGAGAAAAGGAAATCATGTACATACGAGTTTGGCAGTCTTGAAATCTTTTTGGGCACAGCTGGCACGCTTTGCTGGTTTATGAGCTACATCCAGCATTTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAGTTTTGTGAATATAATCCGTAAATATTTGTGGATGGTTATCTTCAAAAAAAAAAA]


>consensus_8953#0 GCATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTG ACAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTG TTGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAA AGGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCT TCACCTGTGACAATGAAACACTTCTGGCAAATCCTACACAGCTCCTTGATGTGAGAACTA CGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTG GTTTGAGCCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCAT TGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTCAGAGTTAC CCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATT CTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTT CAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTG CAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGAT GGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTT TTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTTAAACCGTGAAATATATATAAGCGGA GAAAAGGAAATCATGTACATACGAGTTTGGCAGTCTTGAAATCTTTTTGGGCACAGCTGG CACGCTCTGCTGGTTTATGAGCTACATCCAGCATTTTTTCAGCATGAGCATTCAGCATTG CCTGTAAATAATCAGATGAAGTTTGTGAATATAATCCGTAAATATTTGTGGATGGTTATC TTCAAAAAAAAAAA



consensusID : consensus_8953#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 792
fasta sequence
                              [CATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTGACAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTGTTGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAAAGGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTTCACCTGTGACAATGAAACACTTCTGGCAAATCCTTCACAGCTCCTTGATGTGAGAACTACGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGGTTTGAGCCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATTTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTTAAACNCGTGAAATATATA]

[-] EMBL CB663587             [CATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTGACAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTGTTGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAAAGGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTTCACCTGTGACAATGAAACACTTCTGGCAAATCCTTCACAGCTCCTTGATGTGAGAACTACGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGGTTTGAGCCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATTTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTTAAACNCGTGAAATATATA]


>consensus_8953#1 CATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTGA CAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTGT TGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAAA GGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTT CACCTGTGACAATGAAACACTTCTGGCAAATCCTTCACAGCTCCTTGATGTGAGAACTAC GTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGG TTTGAGCCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATT GGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTATCACAGACA GTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGT GAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCT GCATTGAAAGGCTTCATTGCAACGATATTTAAGCCCAAGGCGTATAGAGGATGGAGGACA TTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAAT GAACATGGGAAATAACGTTTTCGTTCACATGTTTATTCCTGTGGTTGTTTAGTTAAACNC GTGAAATATATA



consensusID : consensus_8953#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 615
fasta sequence
                              [AATTGCAAATGATGCCAGTTGCCAGGAGTTTACCCCCCCACTTTGGTGGGCCCATGGCACCCACCGCAAGTATCCACTAGACAGTGGGACAAGTTCTCTAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCNTGTATCCTGTTGACACACCAAGACCCTTGGAGCTGCAGTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTGTTATTCCTGTGGTTGTTTAGTTAAACCGTGAAATATATATAAGCGGAGAAAACGGAAATCATGTACATACGAGTTCGGCAGTCTTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGCTGGTTTATGAGCTACATCCAGCATTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAGTTTTGTGAATATAATCCGTAAATATTTGTGNCNTCGCGTTATCTTCAGNTAGTTCTTTGAAAAA]

[+] EMBL BM419195             [AATTGCAAATGATGCCAGTTGCCAGGAGTTTACCCCCCCACTTTGGTGGGCCCATGGCACCCACCGCAAGTATCCACTAGACAGTGGGACAAGTTCTCTAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCNTGTATCCTGTTGACACACCAAGACCCTTGGAGCTGCAGTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATGTGTTATTCCTGTGGTTGTTTAGTTAAACCGTGAAATATATATAAGCGGAGAAAACGGAAATCATGTACATACGAGTTCGGCAGTCTTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGCTGGTTTATGAGCTACATCCAGCATTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAGTTTTGTGAATATAATCCGTAAATATTTGTGNCNTCGCGTTATCTTCAGNTAGTTCTTTGAAAAA]


>consensus_8953#2 AATTGCAAATGATGCCAGTTGCCAGGAGTTTACCCCCCCACTTTGGTGGGCCCATGGCAC CCACCGCAAGTATCCACTAGACAGTGGGACAAGTTCTCTAAATTCTTTGGTTTATGAGGA TTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCNTGTAT CCTGTTGACACACCAAGACCCTTGGAGCTGCAGTGAAAGGCTTCATTGCAACGATATCTA AGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACA CCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGAAATAACGTTTTCGTTCACATG TGTTATTCCTGTGGTTGTTTAGTTAAACCGTGAAATATATATAAGCGGAGAAAACGGAAA TCATGTACATACGAGTTCGGCAGTCTTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGC TGGTTTATGAGCTACATCCAGCATTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATA ATCAGATGAAGTTTTGTGAATATAATCCGTAAATATTTGTGNCNTCGCGTTATCTTCAGN TAGTTCTTTGAAAAA



consensusID : consensus_8953#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 440
fasta sequence
                              [ACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGGAAATAACGTTTTCGTTCACATGTTTAATTCCTGTGGGTTGGTTAGTTAAACCCGTGGAATTTTNTATAAGCGGGGGAAAAGGGAAATCATTGTCCATACGGGGTTTTGGCANTCCTTGAAAACCTTTTNGGGGCCCAAAAAAAAAAA]

[+] EMBL C99410               [ACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTGTTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGGAAATAACGTTTTCGTTCACATGTTTAATTCCTGTGGGTTGGTTAGTTAAACCCGTGGAATTTTNTATAAGCGGGGGAAAAGGGAAATCATTGTCCATACGGGGTTTTGGCANTCCTTGAAAACCTTTTNGGGGCCCAAAAAAAAAAA]


>consensus_8953#3 ACCCCCACTTGGTGGCCATGCACCACCGCAAGTATCACAGACAGTGGACAAGTTCTCAAA TTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATTACTATCGTTG TTCAGATCCATCTGTATCCTTTGACACACAAGACCTTGGAGCTGCATTGAAAGGCTTCAT TGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTGTCTTATGTTATAGG ATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAACATGGGGAAATAAC GTTTTCGTTCACATGTTTAATTCCTGTGGGTTGGTTAGTTAAACCCGTGGAATTTTNTAT AAGCGGGGGAAAAGGGAAATCATTGTCCATACGGGGTTTTGGCANTCCTTGAAAACCTTT TNGGGGCCCAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      GCATGTCAACAAAGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTG 60
consensus_8953#1      -------------------------------------------------CATGTCAACAA 11
                                                                                  

consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      ACAAGGTGCATTTGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTG 120
consensus_8953#1      AGATGTGGGAGGTCACAGTTGAGCATTCAAAAACCTGTATTCTCCCTGACAAGGTGCATT 71
                                                                                  

consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      TTGGAGAAGTGAGAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAA 180
consensus_8953#1      TGTACTATCCAGACAGCCTAAGCAAAACAGCAGTCGTGTTCAATGTTGTTGGAGAAGTGA 131
                                                                                  

consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      AGGAGAAGGCTGAAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCT 240
consensus_8953#1      GAGGGTTAATATCTGAGAAGTTTGTTTGTGCTGATGATCTTAGAGAAAAGGAGAAGGCTG 191
                                                                                  

consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      TCACCTGTGACAATGAAACACTTCTGGCAAATCCTACACAGCTCCTTGATGTGAGAACTA 300
consensus_8953#1      AAGCATATGCAGCTGTGAAGCAAGCGTATGAAAATTGGAAGAATGTCTTCACCTGTGACA 251
                                                                                  

consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      CGTCATTGCATGAAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTG 360
consensus_8953#1      ATGAAACACTTCTGGCAAATCCTTCACAGCTCCTTGATGTGAGAACTACGTCATTGCATG 311
                                                                                  

consensus_8953#2      ------------------------------------------------------------
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      GTTTGAGCCAGTCAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCAT 420
consensus_8953#1      AAAATGACTATGACCAGTTTCCTACACAAGTTTCTACCGATGGTTTTGGTTTGAGCCAGT 371
                                                                                  

consensus_8953#2      ----------------------AATTGCAAATGATGCC---AGTTGCCAGGAGTTTA--- 32
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      TGGATCCTTGTCCATTGGAAACTGCAGAAAACAATGAA---AATCAATATCAGTCAGAGT 477
consensus_8953#1      CAAGCATACCATCACCTGACATTTTCTCAATTGATCCCTCGAGTGCATTGGATCCTTGTC 431
                                                                                  

consensus_8953#2      CCCCCCCACTTTGGTGGGCCCATGGCACCCACCGCAAGTATCCACTAGACAGTGGGACAA 92
consensus_8953#3      -ACCCCCACTT-GGTGG--CCATG-CACC-ACCGCAAGTATCA--CAGACAGTGG-ACAA 51
consensus_8953#0      TACCCCCACTT-GGTGG--CCATG-CACC-ACCGCAAGTATCA--CAGACAGTGG-ACAA 529
consensus_8953#1      CATTGGAAACTGCAGAAAACAATGAAAATCAATATCAGTATCA--CAGACAGTGG-ACAA 488
                             *  *        * ***  *   *     ******    ********* ****

consensus_8953#2      GTTCTCTAAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATT 152
consensus_8953#3      GTTCTC-AAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATT 110
consensus_8953#0      GTTCTC-AAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATT 588
consensus_8953#1      GTTCTC-AAATTCTTTGGTTTATGAGGATTGCACCAGTCACCCCTCATTCAGTGAAGATT 547
                      ****** *****************************************************

consensus_8953#2      ACTATCGTTGTTCAGATCCATCNTGTATCCTGTTGACACACCAAGACCCTTGGAGCTGCA 212
consensus_8953#3      ACTATCGTTGTTCAGATCCATCT-GTATCCT-TTGACACAC-AAGACC-TTGGAGCTGCA 166
consensus_8953#0      ACTATCGTTGTTCAGATCCATCT-GTATCCT-TTGACACAC-AAGACC-TTGGAGCTGCA 644
consensus_8953#1      ACTATCGTTGTTCAGATCCATCT-GTATCCT-TTGACACAC-AAGACC-TTGGAGCTGCA 603
                      **********************  ******* ********* ****** ***********

consensus_8953#2      GTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTG 272
consensus_8953#3      TTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTG 226
consensus_8953#0      TTGAAAGGCTTCATTGCAACGATATCTAAGCCCAAGGCGTATAGAGGATGGAGGACATTG 704
consensus_8953#1      TTGAAAGGCTTCATTGCAACGATATTTAAGCCCAAGGCGTATAGAGGATGGAGGACATTG 663
                       ************************ **********************************

consensus_8953#2      TCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAA 332
consensus_8953#3      TCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAA 286
consensus_8953#0      TCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAA 764
consensus_8953#1      TCTTATGTTATAGGATGGATATTCTACACCAAGAAGATTGTTGCTATGAAAAGAAATGAA 723
                      ************************************************************

consensus_8953#2      CATGGG-AAATAACGTTTTCGTTCACATGTGTTATTCCTGTGG-TTGTTTAGTTAAACC- 389
consensus_8953#3      CATGGGGAAATAACGTTTTCGTTCACATGTTTAATTCCTGTGGGTTGGTTAGTTAAACCC 346
consensus_8953#0      CATGGG-AAATAACGTTTTCGTTCACATGT-TTATTCCTGTGG-TTGTTTAGTTAAACC- 820
consensus_8953#1      CATGGG-AAATAACGTTTTCGTTCACATGT-TTATTCCTGTGG-TTGTTTAGTTAAACNC 780
                      ****** *********************** * ********** *** **********  

consensus_8953#2      GTGAAATAT-ATATAAGCGGAG-AAAACGGAAATCAT-GTACATACGAG--TTCGGCAGT 444
consensus_8953#3      GTGGAATTTTNTATAAGCGGGGGAAAAGGGAAATCATTGTCCATACGGGGTTTTGGCANT 406
consensus_8953#0      GTGAAATAT-ATATAAGCGGAG--AAAAGGAAATCAT-GTACATACGAG--TTTGGCAGT 874
consensus_8953#1      GTGAAATAT-ATA----------------------------------------------- 792
                      *** *** *  **                                               

consensus_8953#2      C-TTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGCTGGTTTATGAGCTACATCCAGCA 503
consensus_8953#3      CCTTGAAAACCTTTTNGGGGCCCAAAAAAAAAAA-------------------------- 440
consensus_8953#0      C-TTGAAATCTTTTTGGGCACAGCTGGCACGCTCTGCTGGTTTATGAGCTACATCCAGCA 933
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#2      TTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAGTTTTGTGAATAT 563
consensus_8953#3      ------------------------------------------------------------
consensus_8953#0      TTTTTTCAGCATGAGCATTCAGCATTGCCTGTAAATAATCAGATGAAGTTT-GTGAATAT 992
consensus_8953#1      ------------------------------------------------------------
                                                                                  

consensus_8953#2      AATCCGTAAATATTTGTGNCNTCGCGTTATCTTCAGNTAGTTCTTTGAAAAA 615
consensus_8953#3      ----------------------------------------------------
consensus_8953#0      AATCCGTAAATATTTGTGGATG---GTTATCTTCAAAAAAAAAAA------- 1034
consensus_8953#1      ----------------------------------------------------
                                                                          




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)