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Oryza sativa
cluster # 8955 cluster # 8955       Sequences # 6       consensus # 2

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8955#0 length = 3083 sequences # 5  
 consensus_8955#1 length = 786 sequences # 1  
consensusID : consensus_8955#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 3083
fasta sequence 
                              [GCTCCATCCCTAATCCACCCATCTTCCTCCCGGACGCACGCACCGCCGTCCCCCCGCCGCCCACCGGATTCTCCACCACCTGCGCGCCGCGGCCAGCGCCGCAGTAGACCACCCGCTCGTGTCCTCCTTCAAGACGCTAGGCTCGTCTTCTTCAACGCCGCCCGGCCACCTTGCCCTCCCCTGCGTTCCCTGCCGCAATGCCGCTGCCTTTCCTCGAAGCCAGGGCCGCCGTCAATTCGCCGGCAAGAGTCACCCTCTAACAGGCGGTGGCCATCGCCGATACAAACTTCGGCTAGATCCGGTGAGCCCACGAGAGAAAGAAGGGAGGGGGCGCTAGCTAGCAGAGGAGGAGAGGAGGCGGCGTGCGCTGGTGAGAGGTGGCATCGCATCAGATCCTTCGCCACCTGCGCGTCGCGGCCAATGACGCCGTGATGAACCACCCGCTCGTGTCTTCCCTCAAGGTGCTGCGCCGACTCGTCTTCTCCCCCGCCGTCGTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCTGCTGTGCAGGCTCGATGTGGAGCGCGGCGCGAGGGCTGCGGCCAAGCGGCGGCAGCGATGTCGGCGATGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGATCAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCACGGCCATGTGAACCCAATGTGGCAGCAACTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCATGAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGCAATTCATTCTACAATTCATTCTACAATGCATATCTTGCAGCTAGGAATCATGATATTTCTTTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACCTTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAACGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGCGTTTCAGATTAGAAGTTCAGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCATGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTTACTTTTTTTTTTTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAGCTAATAGAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGATTCACAACCTATACTCATCTACTAGCTAGCTTAACTTATCAGAAAATTGGAAAGGACCTTTATCAAAAGCTGTGATCATTTCCTCAACAATGTATGTCTATATCTTAGATAATCTATATTCATGTCTTTGATAATCTACAATAAATCTAACTACTAAACTTAAGTAAAACAAAGTTATGGCTACCTATTATCTATACATATATATATTCCAATGCTTGTGATATACATACTATTACAATTTCATCCTCGATCTTTAAATTCTAACTTGATTAGGCACTATGTCATACTTTGGCAGAGTTGTAATATCACTGAACTGAAACTTTCATATGACAAAAATGGCCATTAATTTGTATAGATCAGCTGCTGCTGCAGTTACAGTGCATCTATATGTCATGGTGCTGTTTGGCTGGTGCTTTAATCAGTTTGTTACATGCTGAATAAAATGTCATGATCTTTGTACATGCTGTCAAAGTTGCAAATTTTAGCTACATGCTGCCAAAAAATTTCATGATCTGTGACTCTGTGTATGTGCTGCCATGATGAAATTCCTAAGCTGCTGGATTTCCAATTTCTTTGTTCCCCTACTCAATTTAGAAGAAGTAAGAGTTGTGGTCAAAGTGAAGGAGCGTTCTCAGAATAAATGTGCTCTACTCTTTTTTTTTTAATCAATTAGTTTCTCTGGTTTTGTTTTATTCAATTCCAATATTATGGCATGGCATTGATAGCTCAGGAACAACATCAATATTCGACTGAAACTAACTACAATATACTTGCTAAAGTGCATATCTGCAGCTAAAACAAGCAAAAAAGTTTTGGATCTTAACGAACAATCATGTAAATAGCTTATATAACTGCTAAATTTTATTCACATAATGCTAACTAAATTTAAGTTCCAAATGCCTTGCTATGTTTTCTTTTTCTTTCTTTCTTTTTTCTATTGCAGATTAGTGTAGCGGCTTCCTGACCAAAGGTGTAAAGCATCACTG-CTATCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGTTTGTTGCAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGCACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCAAGCAACGATGTATCACACAACTCACACTCACTGGTGCTTTGTCCAGCACCAAACCTCAGCACCAGATTTTTGTGCCAATAATCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGAGGGCCATGGAACCGGTTGATAGCCCGAGGAGCAAGAGGGATTTACAGGAGGTGGAGGACA-GGGAACGCATCGCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTATCAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTTTAGAAGGCTGTGTGTTTCTCCATTTTAGTTTAGATTTGAGAAGGTTCTAGGTTTTTCCTTTAACCTTTTCACTCTGTTTCTCGCCCAACATAACTCAG-TTTTTCTCTTTTTCACTCTGTTTAATTTATCAATTTCTAAATAGTGCCACACGGTCCAATCTCCGGTAAAACTGTCAGCTTGAGAAAAGTGATGTGGAGGAACCATGAACTCAATGTCTTGCTGCATTGAGGTAATATGAATAAAAGGGTAAAGTTCAAATAAAAAAAAAG]

[+] EMBL AK070182             [GCTCCATCCCTAATCCACCCATCTTCCTCCCGGACGCACGCACCGCCGTCCCCCCGCCGCCCACCGGATTCTCCACCACCTGCGCGCCGCGGCCAGCGCCGCAGTAGACCACCCGCTCGTGTCCTCCTTCAAGACGCTAGGCTCGTCTTCTTCAACGCCGCCCGGCCACCTTGCCCTCCCCTGCGTTCCCTGCCGCAATGCCGCTGCCTTTCCTCGAAGCCAGGGCCGCCGTCAATTCGCCGGCAAGAGTCACCCTCTAACAGGCGGTGGCCATCGCCGATACAAACTTCGGCTAGATCCGGTGAGCCCACGAGAGAAAGAAGGGAGGGGGCGCTAGCTAGCAGAGGAGGAGAGGAGGCGGCGTGCGCTGGTGAGAGGTGGCATCGCATCAGATCCTTCGCCACCTGCGCGTCGCGGCCAATGACGCCGTGATGAACCACCCGCTCGTGTCTTCCCTCAAGGTGCTGCGCCGACTCGTCTTCTCCCCCGCCGTCGTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCTGCTGTGCAGGCTCGATGTGGAGCGCGGCGCGAGGGCTGCGGCCAAGCGGCGGCAGCGATGTCGGCGATGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGATCAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCACGGCCATGTGAACCCAATGTGGCAGCAACTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCATGAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGCAATTCATTCTACAATTCATTCTACAATGCATATCTTGCAGCTAGGAATCATGATATTTCTTTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACCTTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAACGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGCGTTTCAGATTAGAAGTTCAGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCATGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTTACTTTTTTTTTTTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAGCTAATAGAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGATTCACAACCTATACTCATCTACTAGCTAGCTTAACTTATCAGAAAATTGGAAAGGACCTTTATCAAAAGCTGTGATCATTTCCTCAACAATGTATGTCTATATCTTAGATAATCTATATTCATGTCTTTGATAATCTACAATAAATCTAACTACTAAACTTAAGTAAAACAAAGTTATGGCTACCTATTATCTATACATATATATATTCCAATGCTTGTGATATACATACTATTACAATTTCATCCTCGATCTTTAAATTCTAACTTGATTAGGCACTATGTCATACTTTGGCAGAGTTGTAATATCACTGAACTGAAACTTTCATATGACAAAAATGGCCATTAATTTGTATAGATCAGCTGCTGCTGCAGTTACAGTGCATCTATATGTCATGGTGCTGTTTGGCTGGTGCTTTAATCAGTTTGTTACATGCTGAATAAAATGTCATGATCTTTGTACATGCTGTCAAAGTTGCAAATTTTAGCTACATGCTGCCAAAAAATTTCATGATCTGTGACTCTGTGTATGTGCTGCCATGATGAAATTCCTAAGCTGCTGGATTTCCAATTTCTTTGTTCCCCTACTCAATTTAGAAGAAGTAAGAGTTGTGGTCAAAGTGAAGGAGCGTTCTCAGAATAAATGTGCTCTACTCTTTTTTTTTTAATCAATTAGTTTCTCTGGTTTTGTTTTATTCAATTCCAATATTATGGCATGGCATTGATAGCTCAGGAACAACATCAATATTCGACTGAAACTAACTACAATATACTTGCTAAAGTGCATATCTGCAGCTAAAACAAGCAAAAAAGTTTTGGATCTTAACGAACAATCATGTAAATAGCTTATATAACTGCTAAATTTTATTCACATAATGCTAACTAAATTTAAGTTCCAAATGCCTTGCTATGTTTTCTTTTTCTTTCTTTCTTTTTTCTATTGCAGATTAGTGTAGCGGCTTCCTGACCAAAGGTGTAAAGCATCACTG CTATCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGAATAAGTTTGTTGCAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGCACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCAAGCAACGATGTATCACACAACTCACACTCACTGGTGCTTTGTCCAGCACCAAACCTCAGCACCAGATTTTTGTGCCAATAATCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGAGGGCCATGGAACCGGTTGATAGCCCGAGGAGCAAGAGGGATTTACAGGAGGTGGAGGACA GGGAACGCATCGCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTATCAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTTTAGAAGGCTGTGTGTTTCTCCATTTTAGTTTAGATTTGAGAAGGTTCTAGGTTTTTCCTTTAACCTTTTCACTCTGTTTCTCGCCCAACATAACTCAG TTTTTCTCCTTTTCACTCTGTTTAATTTATCAATTTCT                                                                                                                                     ]
[-] EMBL CB631825             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             TTGGATCTTAACGAACAATCATGTAAATAGCTTATATAACTGCTAAATTTTATTCACATAATGCTAACTAAATTTAAGTTCCAAATGCCTTGCTAAGTTTTCTTTTTCTTTCTTTCTTTTTTCTATTGCAGATTAGTGTAGCGGCTTCCTGACCAAAGGTGTAAAGCATCACTG CTATCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGTTTGTTGCAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGCACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCAAGCAACGATGTATCACACAACTCACACTCACTGGTGCTTTGTCCAGCACCAAACCTCAGCACCAGATTTTTGTGCCAATAATCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGAGGGCCATGGAACCGATTGATAGCCCGAGGAGCAAGAGGGATTTACAGGAGGTGGAGGACA GGGAACGCATCGCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTATCAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTTTAGAAGGCTGTGTGTTTCTCCATTTTAGTTTAGATTTGAGAAGGTTCTAGGTTTTTCCTTTAACCTTTTCACTCTGTTTCTCGCCCAACATAACTCAG TTTTTATCTTTTTCACTCTGTTTAATTTA                                                                                                                                              ]
[-] EMBL CB632041             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AACTAAATTTAAGTTCCAAATGCCTTGCTATGTGTTCTTCCTCTATCTTTCTTTTCTCTATGGCAGATTAGTGTAGCGGCTTCCTGACCAAAGGTGTAAAGCATCTCTG CTACCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGTTTGTTGCAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGCACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCGAGCAACGATGTATCACACAACTCACACTCAATGGTGCTTTGTCCAGCGCCAAACCTCAGCACCAGATTTTTGTGCCAATAATCACATCAGCTTGGGAGATGTCTTCATGATGCGGTGGGCAAAGGTATCGTGGGCCATGGAACCGGTTGATAGCCCGAGGAGCAAGAGGGATTTACACGAGGTGGAGGACA GGGAACGCATCCCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTATCAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTTTAGAAGGCTGTGTGTTTCTCCATTTTGGTTTAGATTTGAGAAGGTTATAGGTTTTTCCTTTAACCTTTTCACTCTGTTTCTCGCCCAACATATCTCAaaggttt                                                                                                                                                                      ]
[+] EMBL BI812761             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          GGTTTAAACCATCACTGCCTATCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGTTTGTT CAATCCATTAGC AACACC AATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGCACATGAGCAAGAGA GCAGAGAGCAAGTGAAGGGGCGCAAGCAACGATGTATCACACAACTCACACTCACTGGTGCTTTGTCCAGCACC AACCTCAGCACCAGATTTTTGT CC ATAATCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGAGGGCCATGGAACCGATTGATAGCCCGAGGAGCAAGAGGGATTTACAGGAGGTGGAGGACACGGGAACGCATCGCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTATCAAGTACC ATAGTTGGTTGGGATTGGAATGATCCAAATGAGTTGTTCATGTTTTAAAAaaa                                                                                                                                                                                                                                                                      ]
[-] EMBL CB635176             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        CTG CTACCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGTTTGTTGCAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGCACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCGAGCAACGATGTATCACACAACTCACACTCACTGGTGCTTTGTCCAGCGCCAAACCTCAGCACCAGATTTTTGTGCCAATAATCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGTGGGCCATGGAACCGGTTGATAGCCCGAGGAGCAAGAGGGATTTACACGAGGTGGAGGACA GGGAACGCATCCCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTATCAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTTTAGAAGGCTGTGTGTTTCTCCATTTTAGTTTAGATTTGAGAAGGTTCTAGGTTTTTCCTTTAACCTTTTCACTCTGTTTCTCGCCCAACATAACTCAGTTTTTTCTCTTTTTCACTCTGTTTAATTTATCAATTTCTAAATAGTGCCACACGGTCCAATCTCCGGTAAAACTGTCAGCTTGAGAAAAGTGATGTGGAGGAACCATGAACTCAATGTCTTGCTGCATTGAGGTAATATGAATAAAAGGGTAAAGTTCAAATAAAAAAAAAG]




>consensus_8955#0
GCTCCATCCCTAATCCACCCATCTTCCTCCCGGACGCACGCACCGCCGTCCCCCCGCCGC
CCACCGGATTCTCCACCACCTGCGCGCCGCGGCCAGCGCCGCAGTAGACCACCCGCTCGT
GTCCTCCTTCAAGACGCTAGGCTCGTCTTCTTCAACGCCGCCCGGCCACCTTGCCCTCCC
CTGCGTTCCCTGCCGCAATGCCGCTGCCTTTCCTCGAAGCCAGGGCCGCCGTCAATTCGC
CGGCAAGAGTCACCCTCTAACAGGCGGTGGCCATCGCCGATACAAACTTCGGCTAGATCC
GGTGAGCCCACGAGAGAAAGAAGGGAGGGGGCGCTAGCTAGCAGAGGAGGAGAGGAGGCG
GCGTGCGCTGGTGAGAGGTGGCATCGCATCAGATCCTTCGCCACCTGCGCGTCGCGGCCA
ATGACGCCGTGATGAACCACCCGCTCGTGTCTTCCCTCAAGGTGCTGCGCCGACTCGTCT
TCTCCCCCGCCGTCGTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCTGCTGTGC
AGGCTCGATGTGGAGCGCGGCGCGAGGGCTGCGGCCAAGCGGCGGCAGCGATGTCGGCGA
TGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGAT
CAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCACGGCCATGTGAACCCAAT
GTGGCAGCAACTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCAT
GAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGC
AATTCATTCTACAATTCATTCTACAATGCATATCTTGCAGCTAGGAATCATGATATTTCT
TTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACC
TTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAA
CGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGCGTTTCAGATTAGAAGTTC
AGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCA
TGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTTACTTTTTTTTT
TTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAGCTAATA
GAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGATTCACAA
CCTATACTCATCTACTAGCTAGCTTAACTTATCAGAAAATTGGAAAGGACCTTTATCAAA
AGCTGTGATCATTTCCTCAACAATGTATGTCTATATCTTAGATAATCTATATTCATGTCT
TTGATAATCTACAATAAATCTAACTACTAAACTTAAGTAAAACAAAGTTATGGCTACCTA
TTATCTATACATATATATATTCCAATGCTTGTGATATACATACTATTACAATTTCATCCT
CGATCTTTAAATTCTAACTTGATTAGGCACTATGTCATACTTTGGCAGAGTTGTAATATC
ACTGAACTGAAACTTTCATATGACAAAAATGGCCATTAATTTGTATAGATCAGCTGCTGC
TGCAGTTACAGTGCATCTATATGTCATGGTGCTGTTTGGCTGGTGCTTTAATCAGTTTGT
TACATGCTGAATAAAATGTCATGATCTTTGTACATGCTGTCAAAGTTGCAAATTTTAGCT
ACATGCTGCCAAAAAATTTCATGATCTGTGACTCTGTGTATGTGCTGCCATGATGAAATT
CCTAAGCTGCTGGATTTCCAATTTCTTTGTTCCCCTACTCAATTTAGAAGAAGTAAGAGT
TGTGGTCAAAGTGAAGGAGCGTTCTCAGAATAAATGTGCTCTACTCTTTTTTTTTTAATC
AATTAGTTTCTCTGGTTTTGTTTTATTCAATTCCAATATTATGGCATGGCATTGATAGCT
CAGGAACAACATCAATATTCGACTGAAACTAACTACAATATACTTGCTAAAGTGCATATC
TGCAGCTAAAACAAGCAAAAAAGTTTTGGATCTTAACGAACAATCATGTAAATAGCTTAT
ATAACTGCTAAATTTTATTCACATAATGCTAACTAAATTTAAGTTCCAAATGCCTTGCTA
TGTTTTCTTTTTCTTTCTTTCTTTTTTCTATTGCAGATTAGTGTAGCGGCTTCCTGACCA
AAGGTGTAAAGCATCACTGCTATCAAAGTCATTTGACTGATATCTGATTGACGTCCTCAA
CGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGTTTGTTG
CAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGGTTATGC
ACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCAAGCAACGATGTATCACACAAC
TCACACTCACTGGTGCTTTGTCCAGCACCAAACCTCAGCACCAGATTTTTGTGCCAATAA
TCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGAGGGCCATGGA
ACCGGTTGATAGCCCGAGGAGCAAGAGGGATTTACAGGAGGTGGAGGACAGGGAACGCAT
CGCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTGCACTAT
CAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTTTAGAAG
GCTGTGTGTTTCTCCATTTTAGTTTAGATTTGAGAAGGTTCTAGGTTTTTCCTTTAACCT
TTTCACTCTGTTTCTCGCCCAACATAACTCAGTTTTTCTCTTTTTCACTCTGTTTAATTT
ATCAATTTCTAAATAGTGCCACACGGTCCAATCTCCGGTAAAACTGTCAGCTTGAGAAAA
GTGATGTGGAGGAACCATGAACTCAATGTCTTGCTGCATTGAGGTAATATGAATAAAAGG
GTAAAGTTCAAATAAAAAAAAAG

consensusID : consensus_8955#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 786
fasta sequence 
                              [CGCCGTCTTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCGGCAGCGATGTCGGCGATGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGATCAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCATGGCCATGTGAACCCAATGTGGCAGCAGCTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCATGAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGCAATTCATTCTACAATACATATCTTGCAGCTAGGAATCATGATATTTCTTTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACCTTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAACGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGGGTTTCAGATTAGAAGTTCAGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCATGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTAGCTTCTTTTTTTTTTTTTTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAGCTAATAGAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGATTCACAACCTATACTCA]

[+] EMBL CB635175             [CGCCGTCTTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCGGCAGCGATGTCGGCGATGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGATCAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCATGGCCATGTGAACCCAATGTGGCAGCAGCTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCATGAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGCAATTCATTCTACAATACATATCTTGCAGCTAGGAATCATGATATTTCTTTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACCTTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAACGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGGGTTTCAGATTAGAAGTTCAGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCATGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTAGCTTCTTTTTTTTTTTTTTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAGCTAATAGAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGATTCACAACCTATACTCA]




>consensus_8955#1
CGCCGTCTTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCGGCAGCGATGTCGGC
GATGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGG
ATCAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCATGGCCATGTGAACCCA
ATGTGGCAGCAGCTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCC
ATGAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGT
GCAATTCATTCTACAATACATATCTTGCAGCTAGGAATCATGATATTTCTTTTAAATAAT
TACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACCTTGATTTGAA
AAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAACGCACTTTAT
TAAGTGAAAAAGGATTGCTCTGCACTGGACGGGTTTCAGATTAGAAGTTCAGATTTGCAA
GATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCATGGTTGCTGT
CGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTAGCTTCTTTTTTTTTTTTTTGA
GTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAGCTAATAGAAA
GCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGATTCACAACCTA
TACTCA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8955#0      GCTCCATCCCTAATCCACCCATCTTCCTCCCGGACGCACGCACCGCCGTCCCCCCGCCGC 60
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CCACCGGATTCTCCACCACCTGCGCGCCGCGGCCAGCGCCGCAGTAGACCACCCGCTCGT 120
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      GTCCTCCTTCAAGACGCTAGGCTCGTCTTCTTCAACGCCGCCCGGCCACCTTGCCCTCCC 180
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CTGCGTTCCCTGCCGCAATGCCGCTGCCTTTCCTCGAAGCCAGGGCCGCCGTCAATTCGC 240
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CGGCAAGAGTCACCCTCTAACAGGCGGTGGCCATCGCCGATACAAACTTCGGCTAGATCC 300
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      GGTGAGCCCACGAGAGAAAGAAGGGAGGGGGCGCTAGCTAGCAGAGGAGGAGAGGAGGCG 360
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      GCGTGCGCTGGTGAGAGGTGGCATCGCATCAGATCCTTCGCCACCTGCGCGTCGCGGCCA 420
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      ATGACGCCGTGATGAACCACCCGCTCGTGTCTTCCCTCAAGGTGCTGCGCCGACTCGTCT 480
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TCTCCCCCGCCGTCGTGCCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCTGCTGTGC 540
consensus_8955#1      ---------------------------------------------------------CGC 3
                                                                                **

consensus_8955#0      AGGCTCGATGTGGAGCGCGGCGCGAGGGCTGCGGCCAAGCGGCGGCAGCGATGTCGGCGA 600
consensus_8955#1      CGTCTTG-CCCGCGCCGAGGTTGAGGGAACGTACGCAAGCGGCGGCAGCGATGTCGGCGA 62
                       * ** *    *   ** **     **   *    *************************

consensus_8955#0      TGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGAT 660
consensus_8955#1      TGGTCGTGCGGGCCTAATGTGGTGGCAGGGCAGGGCGGACGAGGACCGACGATCTGGGAT 122
                      ************************************************************

consensus_8955#0      CAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCACGGCCATGTGAACCCAAT 720
consensus_8955#1      CAACACGGCGGCAGCGGTGGCTGGGGCACTAGGCACTGGCCATGGCCATGTGAACCCAAT 182
                      ****************************************** *****************

consensus_8955#0      GTGGCAGCAACTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCAT 780
consensus_8955#1      GTGGCAGCAGCTGCCGCGCCGCCGAAGGCCATGTAAATTTGTGCTCCGCAAAGGCTCCAT 242
                      ********* **************************************************

consensus_8955#0      GAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGC 840
consensus_8955#1      GAGGTGTAGGCTCCACATATGTGAAAACGACGGCGGCTGGCTCTGCTGCAAGGTTTGTGC 302
                      ************************************************************

consensus_8955#0      AATTCATTCTACAATTCATTCTACAATGCATATCTTGCAGCTAGGAATCATGATATTTCT 900
consensus_8955#1      AATTCATTCTACAA------------TACATATCTTGCAGCTAGGAATCATGATATTTCT 350
                      **************            * ********************************

consensus_8955#0      TTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACC 960
consensus_8955#1      TTTAAATAATTACCATTATGTCTCTCAAAAAAAAGTATGCAGTATTTATTGCCAATAACC 410
                      ************************************************************

consensus_8955#0      TTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAA 1020
consensus_8955#1      TTGATTTGAAAAGGGTGAAAATAGTTTTTGTTACATATAGTTATGAGTTACATATTTAAA 470
                      ************************************************************

consensus_8955#0      CGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGCGTTTCAGATTAGAAGTTC 1080
consensus_8955#1      CGCACTTTATTAAGTGAAAAAGGATTGCTCTGCACTGGACGGGTTTCAGATTAGAAGTTC 530
                      ***************************************** ******************

consensus_8955#0      AGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCA 1140
consensus_8955#1      AGATTTGCAAGATGCGGTTTATGGGCTTTCATTCCATTCTGTTCAAGGAACTTATTTTCA 590
                      ************************************************************

consensus_8955#0      TGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTTACTT------T 1194
consensus_8955#1      TGGTTGCTGTCGGTCTGAATCCATAAAACTCTTCTATGAGATGTAGCTAGCTTCTTTTTT 650
                      ************************************************  ***      *

consensus_8955#0      TTTTTTTTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAG 1254
consensus_8955#1      TTTTTTTTGAGTCATGTCATTGTATCATGCTTGCTCTATTAAAATTTCCATCCTCATTAG 710
                      ************************************************************

consensus_8955#0      CTAATAGAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGAT 1314
consensus_8955#1      CTAATAGAAAGCAGATCGTCCGATTTGAATCTGATTTCCATCGTCAAGAAAAGCGGTGAT 770
                      ************************************************************

consensus_8955#0      TCACAACCTATACTCATCTACTAGCTAGCTTAACTTATCAGAAAATTGGAAAGGACCTTT 1374
consensus_8955#1      TCACAACCTATACTCA-------------------------------------------- 786
                      ****************                                            

consensus_8955#0      ATCAAAAGCTGTGATCATTTCCTCAACAATGTATGTCTATATCTTAGATAATCTATATTC 1434
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      ATGTCTTTGATAATCTACAATAAATCTAACTACTAAACTTAAGTAAAACAAAGTTATGGC 1494
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TACCTATTATCTATACATATATATATTCCAATGCTTGTGATATACATACTATTACAATTT 1554
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CATCCTCGATCTTTAAATTCTAACTTGATTAGGCACTATGTCATACTTTGGCAGAGTTGT 1614
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      AATATCACTGAACTGAAACTTTCATATGACAAAAATGGCCATTAATTTGTATAGATCAGC 1674
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TGCTGCTGCAGTTACAGTGCATCTATATGTCATGGTGCTGTTTGGCTGGTGCTTTAATCA 1734
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      GTTTGTTACATGCTGAATAAAATGTCATGATCTTTGTACATGCTGTCAAAGTTGCAAATT 1794
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TTAGCTACATGCTGCCAAAAAATTTCATGATCTGTGACTCTGTGTATGTGCTGCCATGAT 1854
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      GAAATTCCTAAGCTGCTGGATTTCCAATTTCTTTGTTCCCCTACTCAATTTAGAAGAAGT 1914
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      AAGAGTTGTGGTCAAAGTGAAGGAGCGTTCTCAGAATAAATGTGCTCTACTCTTTTTTTT 1974
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TTAATCAATTAGTTTCTCTGGTTTTGTTTTATTCAATTCCAATATTATGGCATGGCATTG 2034
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      ATAGCTCAGGAACAACATCAATATTCGACTGAAACTAACTACAATATACTTGCTAAAGTG 2094
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CATATCTGCAGCTAAAACAAGCAAAAAAGTTTTGGATCTTAACGAACAATCATGTAAATA 2154
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      GCTTATATAACTGCTAAATTTTATTCACATAATGCTAACTAAATTTAAGTTCCAAATGCC 2214
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TTGCTATGTTTTCTTTTTCTTTCTTTCTTTTTTCTATTGCAGATTAGTGTAGCGGCTTCC 2274
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TGACCAAAGGTGTAAAGCATCACTGCTATCAAAGTCATTTGACTGATATCTGATTGACGT 2334
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CCTCAACGGTTGACACATACTCATCGGTCAAGTCCTCAACGTACATGGAGTTGGATAAGT 2394
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TTGTTGCAATCCATTAGCAAACACCAAATGCAGAGTTAGTTTTTTGGTGGTACAAGATGG 2454
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TTATGCACATGAGCAAGAGAGGCAGAGAGCAAGTGAAGGGGCGCAAGCAACGATGTATCA 2514
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CACAACTCACACTCACTGGTGCTTTGTCCAGCACCAAACCTCAGCACCAGATTTTTGTGC 2574
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CAATAATCACATCAGCTTGGGAGATGTCTTCCTGATGCGGTGGGCAAAGGTATCGAGGGC 2634
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CATGGAACCGGTTGATAGCCCGAGGAGCAAGAGGGATTTACAGGAGGTGGAGGACAGGGA 2694
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      ACGCATCGCAGACTTGTTCTGTACATGTTTATTAGATCATTGTGACAGAGTGACATGTTG 2754
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      CACTATCAAGTACCAATAGTTGGTTGGGATTGGAATGATCAAAATGAGTTGTTCATGTTT 2814
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TAGAAGGCTGTGTGTTTCTCCATTTTAGTTTAGATTTGAGAAGGTTCTAGGTTTTTCCTT 2874
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TAACCTTTTCACTCTGTTTCTCGCCCAACATAACTCAGTTTTTCTCTTTTTCACTCTGTT 2934
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      TAATTTATCAATTTCTAAATAGTGCCACACGGTCCAATCTCCGGTAAAACTGTCAGCTTG 2994
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      AGAAAAGTGATGTGGAGGAACCATGAACTCAATGTCTTGCTGCATTGAGGTAATATGAAT 3054
consensus_8955#1      ------------------------------------------------------------
                                                                                  

consensus_8955#0      AAAAGGGTAAAGTTCAAATAAAAAAAAAG 3083
consensus_8955#1      -----------------------------


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)