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Oryza sativa
cluster # 8968 cluster # 8968       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_8968#0 length = 1660 sequences # 4  
consensus_8968#1 length = 764 sequences # 1  
consensus_8968#2 length = 487 sequences # 1  

consensusID : consensus_8968#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 1660
fasta sequence
                              [GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATCCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATCCGCGCCTCTCTCTCTCTCCCGTGCCTCCCTCCGAGATCCGCTGCTTCCTCTCCCGCATCGCATCGCCGCTATCGACTCCCGTCGCCGCCCCAGTCTGCCCTCCCACCGCCGCCTCTCTCCCGTCGATCCAATCCGCCGCCCAGTCCCGGCTCCGATCCCCCCTCTCTCTCTCTCTCGCAAACCCTAGCTCCTCGCGATCCCCGTCCTCCGCGCAGCCGCCGATCTCCGTCGCGCCTCCAAGAGTTGCCGCCCGTCTTCCGTTGCCGATCCCCGTCGACCACGACCACGACCACGACCACGACCACGCCGCCCGCCGATCCTCCATCGCCGCCTTCACCGAGTC-ACCGCCCGTCATCCACGACTACGTCGCCGCTGATCCCCCAACCGCACACGGCTCTGGACCACCATCGTCCTGGGAATTCACCATCTGAACTCCTAGCCTAAGGAGAAATCCGCCTTGGCATCCGTCGTTGCTTTTGAGATTATGGAGGCCGACGACGACATTAATATTTTTGTGAAGGATATGAATGCGAATGACGGTGAGCGGCACCCGAGGGGGGAGAAGCGCAGGAGGGTTGGGAACGATCAGAAGGTGAAGGTGGATGACCGTGAGCAGCACTGGTGCGAGGAGAGGGGGGAGAAGCGTAGGAGGGTTGGGCATGGCCAGCAGAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCATGACCAGGAGAGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGGGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGAAGCGTGACCAGCATAGGAGTGTGGAGTGTGACCAGCAGAGGAGCCGT-CAGCGTGACCAGCAGCAGGGACAAGAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACATTGAGACATCGTTTGAATTTGATGGAAGATTAGTTGGCAAGAGACTTGTGGATGCTAAGTATGACAAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAGGCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATATATGACCCTATGTGGCGCCCCCAAACCTCGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCAACATGTACCAGTCCCAGGATACACAAGCTAGTACACACAGAACATCAGTGATCCACACTTGCTTAATTTCTGCAGAATTGTGCTCAAGTTTCTATACACCAATGATATGTTATGAGTTCTGTTGTGTTGACCATCAGTAGTTGGTCCACGTCACTTTAATTTCTGTGGAATTGTGAACAGATACTGTTTAGGTCTATCTTTTATGAACCAGTGATACAGTAGGATGTGCAAGTGCGCCAAC]

[+] EMBL AK107412             [GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATCCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATCCGCGCCTCTCTCTCTCTCCCGTGCCTCCCTCCGAGATCCGCTGCTTCCTCTCCCGCATCGCATCGCCGCTATCGACTCCCGTCGCCGCCCCAGTCTGCCCTCCCACCGCCGCCTCTCTCCCGTCGATCCAATCCGCCGCCCAGTCCCGGCTCCGATCCCCCCTCTCTCTCTCTCTCGCAAACCCTAGCTCCTCGCGATCCCCGTCCTCCGCGCAGCCGCCGATCTCCGTCGCGCCTCCAAGAGTTGCCGCCCGTCTTCCGTTGCCGATCCCCGTCGACCACGACCACGACCACGACCACGACCACGCCGCCCGCCGATCCTCCATCGCCGCCTTCACCGAGTC ACCGCCCGTCATCCACGACTACGTCGCCGCTGATCCCCCAACCGCACACGGCTCTGGACCACCATCGTCCTGGGAATTCACCATCTGAACTCCTAGCCTAAGGAGAAATCCGCCTTGGCATCCGTCGTTGCTTTTGAGATTATGGAGGCCGACGACGACATTAATATTTTTGTGAAGGATATGAATGCGAATGACGGTGAGCGGCACCCGAGGGGGGAGAAGCGCAGGAGGGTTGGGAACGATCAGAAGGTGAAGGTGGATGACCGTGAGCAGCACTGGTGCGAGGAGAGGGGGGAGAAGCGTAGGAGGGTTGGGCATGGCCAGCAGAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCATGACCAGGAGAGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGGGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGAAGCGTGACCAGCATAGGAGTGTGGAGTGTGACCAGCAGAGGAGCCGT CAGCGTGACCAGCAGCAGGGACAAGAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACATTGAGACATCGTTTGAATTTGATGGAAGATTAGTTGGCAAGAGACTTGTGGATGCTAAGTATGACAAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAGGCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATATATGACCCTATGTGGCGCCCCCAAACCTCGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCAACATGTACCAGTCCCAGGATACACAAGCTAGTACACACAGAACATCAGTGATCCACACTTGCTTAATTTCTGCAGAATTGTGCTCAAGTTTCTATACACCAATGATATGTTATGAGTTCTGT                                                                                                                       ]
[+] EMBL CB678342             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ACCGAGCCTTCCGCCCGTCATCCACGACTACGTCGCCGCTGATCCCCCAACCGCACACGGCTCTGGACCACCATCGTCCTGGGAATTCACCATCTGAACTCCTAGCCTAAGGAGAAATCCGCCTTGGCATCCGTCGTTGCTTTTGAGATTATGGAGGCCGACGACGACATTAATATTTTTGTGAAGGATATGAATGCGAATGACGGTGAGCGGCACCCGAGGGGGGAGAAGCGCAGGAGGGTTGGGAACGATCAGAAGGTGAAGGTGGATGACCGTGAGCAGCACTGGTGCGAGGAGAGGGGGGAGAAGCGTAGGAGGGTTGGGCATGGCCAGCAGAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCATGACCAGGAGAGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGGGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGAAGCGTGACCAGCATAGGAGTGTGGAGTGTGACCAGCAGAGGAGCCGT CAGCGTGACCAGCAGCAGGGACAAGAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACATTGAGACATCGTTTGAATTTGATGGAAGATTAGTTGGCAAGAGACTTGTGGATGCTAAGTATGACAAGAGATCTACACCT                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CF295592             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACGGCTCTGGAGCACCATCGTCCTGCGAATTCACCATCTGAACTCCTAGCCTAAGGAGAAATCCGCCTTGGCATCCGTCGATGCTTTTGAGATTATGGAGGCCGACGACGACATTAATATTTTTGTGAAGGATATGAAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[+] EMBL CF589240             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  CGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGGGGAGTGTGGAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCGGCATAGGAG TGTGAAGCGTGACCAGCAGCAGGGACAAGAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACATTGAGACATCGTTTGAATTTGATGGAAGATTAGTTGGCAAGAGACTTGTGGATGCTAAGTATGATAAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAGGCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATATATGACCCTATGTGGCGCCCCCAAACCTCGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCAACATGTACCAGTCCCAGGATACACAAGCTAGTACACACAGAACATCAGTGATCCACACTTGCTTAATTTCTGCAGAATTGTGCTCAAGTTTCTATACACCAATGATATGTTATGAGTTCTGTTGTGTTGACCATCAGTAGTTGGTCCACGTCACTTTAATTTCTGTGGAATTGTGAACAGATACTGTTTAGGTCTATCTTTTATGAACCAGTGATACAGTAGGATGTGCAAGTGCGCCAAC]


>consensus_8968#0 GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATCCAACGAG TATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAG ATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGC GTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATCCGCGCCTCT CTCTCTCTCCCGTGCCTCCCTCCGAGATCCGCTGCTTCCTCTCCCGCATCGCATCGCCGC TATCGACTCCCGTCGCCGCCCCAGTCTGCCCTCCCACCGCCGCCTCTCTCCCGTCGATCC AATCCGCCGCCCAGTCCCGGCTCCGATCCCCCCTCTCTCTCTCTCTCGCAAACCCTAGCT CCTCGCGATCCCCGTCCTCCGCGCAGCCGCCGATCTCCGTCGCGCCTCCAAGAGTTGCCG CCCGTCTTCCGTTGCCGATCCCCGTCGACCACGACCACGACCACGACCACGACCACGCCG CCCGCCGATCCTCCATCGCCGCCTTCACCGAGTCACCGCCCGTCATCCACGACTACGTCG CCGCTGATCCCCCAACCGCACACGGCTCTGGACCACCATCGTCCTGGGAATTCACCATCT GAACTCCTAGCCTAAGGAGAAATCCGCCTTGGCATCCGTCGTTGCTTTTGAGATTATGGA GGCCGACGACGACATTAATATTTTTGTGAAGGATATGAATGCGAATGACGGTGAGCGGCA CCCGAGGGGGGAGAAGCGCAGGAGGGTTGGGAACGATCAGAAGGTGAAGGTGGATGACCG TGAGCAGCACTGGTGCGAGGAGAGGGGGGAGAAGCGTAGGAGGGTTGGGCATGGCCAGCA GAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCATGACCAGGAGAGGAGTGTGGA GCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGGGGAGTGTGGAGCGTGACCAGGA GAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGAAGCGTGACCAGCATAGGAGTGTGGA GTGTGACCAGCAGAGGAGCCGTCAGCGTGACCAGCAGCAGGGACAAGAAAAGGTGGTGGG GAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACAT TGAGACATCGTTTGAATTTGATGGAAGATTAGTTGGCAAGAGACTTGTGGATGCTAAGTA TGACAAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAGGCG TAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATATATGACCCTATGTGGCGCCCCCAA ACCTCGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCAACATGTACCAGTCCCAGGATA CACAAGCTAGTACACACAGAACATCAGTGATCCACACTTGCTTAATTTCTGCAGAATTGT GCTCAAGTTTCTATACACCAATGATATGTTATGAGTTCTGTTGTGTTGACCATCAGTAGT TGGTCCACGTCACTTTAATTTCTGTGGAATTGTGAACAGATACTGTTTAGGTCTATCTTT TATGAACCAGTGATACAGTAGGATGTGCAAGTGCGCCAAC



consensusID : consensus_8968#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 764
fasta sequence
                              [GATGGAGCCACTCAGCGTGACCAGGAGAGGAGCCACTAGCATGACCAGGAGAGGAGTGTGGAGCGTGACCAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGAGGAGTGTGGAGTGTGACCAGGAGAGGAGCCACCAGCGTGACTAGGAGAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGGAGCGTGACCAGCATAGCAGTGTGAATCGTGACCAGCATAGGAGTGTGGAGCGTGACCAACAGAGGAGCCGTCAGCGTGACCAGCGGCAGGGACAAGAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACGTCGAGACATCCTTTGAATTTGAGGGAAGATTACTTGGCAAGAGACTTGTGGATACTAAGGATGACAATAGATCTACACCTAAGGGGCATACGAGAAGACACCAGGGACGGCGCAAGAGGCGTATCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGGCGCCCCCGAACCTTGTGGGTCCGGCGGGCACAGGACTGTACCTGTGCAACATGTACCAGTCCCAAGATACGCAATCTGGTACACGCAGAACATCGGTGATCCACACTTGCTTAATTTGTGCCGAATTGAGCTCAAGTCTCTATACACCAATGATATGTTATGAGATCCGTTGTGTTGACCATCAGCAGTTGTTCCACGTCACTTTAATTTCTGTGGAATTGTGA]

[+] EMBL CB624010             [GATGGAGCCACTCAGCGTGACCAGGAGAGGAGCCACTAGCATGACCAGGAGAGGAGTGTGGAGCGTGACCAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGAGGAGTGTGGAGTGTGACCAGGAGAGGAGCCACCAGCGTGACTAGGAGAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGGAGCGTGACCAGCATAGCAGTGTGAATCGTGACCAGCATAGGAGTGTGGAGCGTGACCAACAGAGGAGCCGTCAGCGTGACCAGCGGCAGGGACAAGAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACGTCGAGACATCCTTTGAATTTGAGGGAAGATTACTTGGCAAGAGACTTGTGGATACTAAGGATGACAATAGATCTACACCTAAGGGGCATACGAGAAGACACCAGGGACGGCGCAAGAGGCGTATCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGGCGCCCCCGAACCTTGTGGGTCCGGCGGGCACAGGACTGTACCTGTGCAACATGTACCAGTCCCAAGATACGCAATCTGGTACACGCAGAACATCGGTGATCCACACTTGCTTAATTTGTGCCGAATTGAGCTCAAGTCTCTATACACCAATGATATGTTATGAGATCCGTTGTGTTGACCATCAGCAGTTGTTCCACGTCACTTTAATTTCTGTGGAATTGTGA]


>consensus_8968#1 GATGGAGCCACTCAGCGTGACCAGGAGAGGAGCCACTAGCATGACCAGGAGAGGAGTGTG GAGCGTGACCAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGAG GAGTGTGGAGTGTGACCAGGAGAGGAGCCACCAGCGTGACTAGGAGAGGAGCCACCAGCG TGACCGGCATAGGAGTGTGGAGCGTGACCAGCATAGCAGTGTGAATCGTGACCAGCATAG GAGTGTGGAGCGTGACCAACAGAGGAGCCGTCAGCGTGACCAGCGGCAGGGACAAGAAAA GGTGGTGGGGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTAT ATCCGACGTCGAGACATCCTTTGAATTTGAGGGAAGATTACTTGGCAAGAGACTTGTGGA TACTAAGGATGACAATAGATCTACACCTAAGGGGCATACGAGAAGACACCAGGGACGGCG CAAGAGGCGTATCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGG CGCCCCCGAACCTTGTGGGTCCGGCGGGCACAGGACTGTACCTGTGCAACATGTACCAGT CCCAAGATACGCAATCTGGTACACGCAGAACATCGGTGATCCACACTTGCTTAATTTGTG CCGAATTGAGCTCAAGTCTCTATACACCAATGATATGTTATGAGATCCGTTGTGTTGACC ATCAGCAGTTGTTCCACGTCACTTTAATTTCTGTGGAATTGTGA



consensusID : consensus_8968#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 487
fasta sequence
                              [ACCAGCATAGGAGTGTGGAGCTGACCAGCAGAGGACCGTCAGCGTGACCAGCAGCAGGGACAAGTAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCACGGGGGCGGGAAGAATTCATCACTATATCCGACGTCGAGACATCCTGGTGAATTTGAGGGAAGATTAGTTGGCAAGAGACTTGTGGATACTAAGTATGACACAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAGGCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGGCGCCCCCGAACCTTGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCACCCCGTACCAGTCCCAGGATACACAAGCTGGTACACACAGAACATCGGTGATCCACACTTGCTTAATTTGTGCCGAATTGTGCTCAAGTCTCTATACACCAATGATATGTTATGAGTTCAAAAAAAAAA]

[+] EMBL BI812901             [ACCAGCATAGGAGTGTGGAGCTGACCAGCAGAGGACCGTCAGCGTGACCAGCAGCAGGGACAAGTAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCACGGGGGCGGGAAGAATTCATCACTATATCCGACGTCGAGACATCCTGGTGAATTTGAGGGAAGATTAGTTGGCAAGAGACTTGTGGATACTAAGTATGACACAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAGGCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGGCGCCCCCGAACCTTGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCACCCCGTACCAGTCCCAGGATACACAAGCTGGTACACACAGAACATCGGTGATCCACACTTGCTTAATTTGTGCCGAATTGTGCTCAAGTCTCTATACACCAATGATATGTTATGAGTTCAAAAAAAAAA]


>consensus_8968#2 ACCAGCATAGGAGTGTGGAGCTGACCAGCAGAGGACCGTCAGCGTGACCAGCAGCAGGGA CAAGTAAAAGGTGGTGGGGAGTGACCACCCGAGTAAGGAGCACGGGGGCGGGAAGAATTC ATCACTATATCCGACGTCGAGACATCCTGGTGAATTTGAGGGAAGATTAGTTGGCAAGAG ACTTGTGGATACTAAGTATGACACAGAGATCTACACCTAAGGGGCATAGGAGAAGACACA AGGGACGGCGCAGGAGGCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGA CCCTATGTGGCGCCCCCGAACCTTGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCACC CCGTACCAGTCCCAGGATACACAAGCTGGTACACACAGAACATCGGTGATCCACACTTGC TTAATTTGTGCCGAATTGTGCTCAAGTCTCTATACACCAATGATATGTTATGAGTTCAAA AAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_8968#0      GTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATCCAACGAG 60
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      TATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGATAG 120
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      ATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGC 180
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      GTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCGCTCCTACCGATCCGCGCCTCT 240
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      CTCTCTCTCCCGTGCCTCCCTCCGAGATCCGCTGCTTCCTCTCCCGCATCGCATCGCCGC 300
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      TATCGACTCCCGTCGCCGCCCCAGTCTGCCCTCCCACCGCCGCCTCTCTCCCGTCGATCC 360
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      AATCCGCCGCCCAGTCCCGGCTCCGATCCCCCCTCTCTCTCTCTCTCGCAAACCCTAGCT 420
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      CCTCGCGATCCCCGTCCTCCGCGCAGCCGCCGATCTCCGTCGCGCCTCCAAGAGTTGCCG 480
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      CCCGTCTTCCGTTGCCGATCCCCGTCGACCACGACCACGACCACGACCACGACCACGCCG 540
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      CCCGCCGATCCTCCATCGCCGCCTTCACCGAGTCACCGCCCGTCATCCACGACTACGTCG 600
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      CCGCTGATCCCCCAACCGCACACGGCTCTGGACCACCATCGTCCTGGGAATTCACCATCT 660
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      GAACTCCTAGCCTAAGGAGAAATCCGCCTTGGCATCCGTCGTTGCTTTTGAGATTATGGA 720
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      GGCCGACGACGACATTAATATTTTTGTGAAGGATATGAATGCGAATGACGGTGAGCGGCA 780
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------------------------
                                                                                  

consensus_8968#0      CCCGAGGGGGGAGAAGCGCAGGAGGGTTGGGAACGATCAGAAGGTGAAGGTGGATGACCG 840
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      ------------------------------------------GATGGAGCCAC-TCAGCG 17
                                                                                  

consensus_8968#0      TGAGCAGCACTGGTGCGAGGAGAGGGGGGAGAAGCGTAGGAGGGTTGGGCATGGCCAGCA 900
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      TGACCAGGAGAGGAGCCACTAGCATGACCAGGAG---AGGAGTGTGGAGCGTGACCA--- 71
                                                                                  

consensus_8968#0      GAGGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCATGACCAGGAGAGGAGTGTGGA 960
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      --GGAGCCACCAGCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGAGGAGTGTGGA 129
                                                                                  

consensus_8968#0      GCGTGACCAGGAGAGGAGCCACCAGCGTGACCAGGAGGGGAGTGTGGAGCGTGACCAGGA 1020
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      GTGTGACCAGGAGAGGAGCCACCAGCGTGACTAGGAGAGGAGCCACCAGCGTGACCGGCA 189
                                                                                  

consensus_8968#0      GAGGAGCCACCAGCGTGACCGGCATAGGAGTGTGAAGCGTGACCAGCATAGGAGTGTGGA 1080
consensus_8968#2      -----------------------------------------ACCAGCATAGGAGTGTGGA 19
consensus_8968#1      TAGGAGTGTGGAGCGTGACCAGCATAGCAGTGTGAATCGTGACCAGCATAGGAGTGTGGA 249
                                                               *******************

consensus_8968#0      GTGTGACCAGCAGAGGAGCCGTCAGCGTGACCAGCAGCAGGGACAAG-AAAAGGTGGTGG 1139
consensus_8968#2      GC-TGACCAGCAGAGGA-CCGTCAGCGTGACCAGCAGCAGGGACAAGTAAAAGGTGGTGG 77
consensus_8968#1      GCGTGACCAACAGAGGAGCCGTCAGCGTGACCAGCGGCAGGGACAAG-AAAAGGTGGTGG 308
                      *  ****** ******* ***************** *********** ************

consensus_8968#0      GGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACA 1199
consensus_8968#2      GGAGTGACCACCCGAGTAAGGAGCA-CGGGGGCGGGAAGAATTCATCACTATATCCGACG 136
consensus_8968#1      GGAGTGACCACCCGAGTAAGGAGCAGCGGGGGCGGGAAGAATTCATCACTATATCCGACG 368
                      ************************* ********************************* 

consensus_8968#0      TTGAGACATCGTT-TGAATTTGATGGAAGATTAGTTGGCAAGAGACTTGTGGATGCTAAG 1258
consensus_8968#2      TCGAGACATCCTGGTGAATTTGAGGGAAGATTAGTTGGCAAGAGACTTGTGGATACTAAG 196
consensus_8968#1      TCGAGACATCCTT-TGAATTTGAGGGAAGATTACTTGGCAAGAGACTTGTGGATACTAAG 427
                      * ******** *  ********* ********* ******************** *****

consensus_8968#0      TATGACA-AGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAG 1317
consensus_8968#2      TATGACACAGAGATCTACACCTAAGGGGCATAGGAGAAGACACAAGGGACGGCGCAGGAG 256
consensus_8968#1      GATGACA-ATAGATCTACACCTAAGGGGCATACGAGAAGACACCAGGGACGGCGCAAGAG 486
                       ****** * ********************** ********** ************ ***

consensus_8968#0      GCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATATATGACCCTATGTGGCGCCCC 1377
consensus_8968#2      GCGTAGCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGGCGCCCC 316
consensus_8968#1      GCGTATCTCTTCTTCGACGTAGCTCTTCCTCGATACATGTATGACCCTATGTGGCGCCCC 546
                      ***** ******************************** *********************

consensus_8968#0      CAAACCTCGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCAACATGTACCAGTCCCAGG 1437
consensus_8968#2      CGAACCTTGTGGGTCCGGCGGCCACAGTACTGTACCTGTGCACCCCGTACCAGTCCCAGG 376
consensus_8968#1      CGAACCTTGTGGGTCCGGCGGGCACAGGACTGTACCTGTGCAACATGTACCAGTCCCAAG 606
                      * ***** ************* ***** ************** *  ************ *

consensus_8968#0      ATACACAAGCTAGTACACACAGAACATCAGTGATCCACACTTGCTTAATTTCTGCAGAAT 1497
consensus_8968#2      ATACACAAGCTGGTACACACAGAACATCGGTGATCCACACTTGCTTAATTTGTGCCGAAT 436
consensus_8968#1      ATACGCAATCTGGTACACGCAGAACATCGGTGATCCACACTTGCTTAATTTGTGCCGAAT 666
                      **** *** ** ****** ********* ********************** *** ****

consensus_8968#0      TGTGCTCAAGTTTCTATACACCAATGATATGTTATGAGTTCTGTTGTGTTGACCATCAGT 1557
consensus_8968#2      TGTGCTCAAGTCTCTATACACCAATGATATGTTATGAGTTCAAAAAAAAAA--------- 487
consensus_8968#1      TGAGCTCAAGTCTCTATACACCAATGATATGTTATGAGATCCGTTGTGTTGACCATCAGC 726
                      ** ******** ************************** **                   

consensus_8968#0      AGTTGGTCCACGTCACTTTAATTTCTGTGGAATTGTGAACAGATACTGTTTAGGTCTATC 1617
consensus_8968#2      ------------------------------------------------------------
consensus_8968#1      AGTTGTTCCACGTCACTTTAATTTCTGTGGAATTGTGA---------------------- 764
                                                                                  

consensus_8968#0      TTTTATGAACCAGTGATACAGTAGGATGTGCAAGTGCGCCAAC 1660
consensus_8968#2      -------------------------------------------
consensus_8968#1      -------------------------------------------
                                                                 




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)