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Oryza sativa
cluster # 9004 cluster # 9004       Sequences # 6       consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9004#0 length = 2970 sequences # 4  
 consensus_9004#1 length = 617 sequences # 1  
consensus_9004#2 length = 310 sequences # 1  
consensusID : consensus_9004#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2970
fasta sequence 
                              [TGCCCTAGAAGTTGAAAGTTCCAATGAAATATTACCCCGCCAAACAACATCATTAAAGAGAAACAATGATTCTCAGAGAGAGAAAAACCCTGATGAGGGCTCAGAATCCAAGGATGGTCCTGAAGGGTCACCTGCTGCTGCTGATGAAGCTGCAGATAAACTGAGTGCAGATCACTTTGATGGTAATGATGGCAGTCTTGCTTTGGTTGATAGTGCTGAAGTGGATGGTGATGATGTTATCTCAGATCCTCACACGGTTAGTGAGACAACTACAACTGATGGTGATAACTTGTCTCATTCTGGTAAAAAACAGAAACTAATTTCGAGGGCAGAGCAGCCCACTGGACACAATAGCAGTGATCAGGATGAATTGAGGACACGGAATAGTGATAATAGTAGAGGGAGGTCTGGTAGCAGCAAAGATAATCAAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCAAGATAGGCGGTCCAGGCGAATAAATGATGCAAGAAGGCATCATGATGGAGAAGACCGCAATTCTCGTCGGAAGGATGAGTACCTTCGAGACATCAAACCAGATGTGGAAAGATCACATTTGGCCTCCAGGAGTAGGGATGATACCTACCACCCTTATGCAAACAGAGACAGGGACATGCGTGGCAGAAGTTATGATAGGGTAAGAGATACAGAAATTTGGCAGAGGAGAGAAGAAAGTGTTCACAACAGACGAGCAAAAGAGGAAGATGTGAGGCTCGAACACAATGCTGAAGTTGGTGCAAGGAATAGAAATAAGATGAGGCCACCTGTTGATCGGAATGATAGGATTGAAGATCCTCATGCAAGGAAGCGGTTGGATGATGGTGACTGGAGGGGCTCTAGACCAAGAGAGCGTGGTGATGTTGTTCTGAATCGTCGTGAAAATATAGATGATTCGCATATGAAGAGAAAGAAGGATGAAGAGAACATGAGGAGAATGAAACCTGAGAATGAAGACATAGTTCATGGACAGCATGGTTATAGAGGAAGGGATGACCCAAACAGAAGGAAGAGAGAGCGGGATGATGGAATTGATCAGAAAAGAAGAGATGACAATGCTAGGATGAGGGAGAAGGCTGATGATCGTTATCATACAAAGCATAAAGAGGATAACTGGCGACAGAGAGAAAGAGAGGACAGGCACAGGCCTAAGCATGACAACACTGTGACCCTTCAGAGAGATGAAGGAAGGGGATCTGGTCGGGGTGGACGGATTTTGGATGATAAATTAGTCACTAGCGGTAGGAAACAGGATGAGTCAAGATCTGCAGGATTAAGCAAAGAAGCGCAAGAGCGCAGCAGACAAAACGACCCTTTGAGGAGAGATCAAGGAGCAGAAGAAAATAACATGCAAAATAGAGGCCGTTCTGATGTACATCCACGTGATGAAAATCCAAATAACAGTGAGAGGAACACCAGGCAAGAAAAACCAAATAATACTCATGACGGTAACCGTCTATCGAGCAATTCTGGTGCTCGCCAAGTGAGTAGAGATAGATACCGGGAAAGCACAAGAAAGGGCAGAAGTTCTGATATTAATGAACATGATCTTCCCAAATCGAGCAAGAGGAGACGTGAAGACCATGAAAGTCATCGTGGTGGGAAGGTCGATGTGAAAGGAGTGAGCGAGCAAGAAAATAGTAGGGATCATACTGTGTCCTCCAAAAAGGGCCAGAATCCACAACGTGAATCATTTGTGAAACAAGCGGAAGAAGATCCCATGTCAGATGATGAAAACCATGAGGATTCAAGAAGGGGTCGCTCTAAGTTGGAGCGGTGGACGAGCCACAAAGAGATAGACTATAGTAGTATCGATAATGAAAATGCACCAACATTTTCTTCCATCAAATCAGATGTTCAAGCTCCTACTGCTGATGAGTTAGGTAAATCTGAAGCAGCTGCAGCTGGCAATTCAGAACTCAAGAGCGGTGGCGATAATGGCCAAACATCTGAGAAGAACGCCGAAGAGCGTGATCGACATCTAGACACTGTTGAGAGGCTCAAGAGACGGAGTGAGCGTTTCAAACTTCCCATGCCTGGTGAGAAGGATGCACCGCAAAGCAAAAAGGTGGATACTGAAGTGCAACCTCCGCAAATCGAATCTGCTTCTGCTGATTTGGAAGTCAAGCCAGAGCGGCCAGCCCGCAAGAGGAGGTGGACTGGGAC-TGGGAGCTAGCTTTGAGCTGACGGTCACTCGAAGGAATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAATCCATGTATGATTTTGCTGTTTAATTTATACATGTATGTGTTAACTTACAGAAATGTTTGATTTTTGGTTGGGGAACTGGATACTGTATTTTTTTTACCCATTCATTTCCCCTAATGATTCCGGTGGTCCAAATGTGGCGCCGGTGCCAGTGTGCCACCAAAATCAGATGGCTCCAAGCCTTTTATGGAAAGCAGCTGATTGGAGTTCCCTGACTTGGTAGGACTGGTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCATTTGAAGAAGCAGGGGTGCCCCATGCAAGCAATCTTTTTCTTGTGATGAACTGCTGGTGATCTGGAGGCACTTGATTATTGTATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATACCAAGTTACCGCTTCTTGTGCATGGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGACCTGGGATGACTACCTACTGTGTGCCATAGTATGTTCTTGTACATTTTGATGAACCTACATTGACGTGCATAAAGTTAGTTCATAGTATGCAGCAAGACTGCAAGAGCTAGTGTAGAGCAGCATGGTATACTGAACATTTGGACGGATCAATAATGTATACATCTTAGGTAGTGGACAGTAGGGTTGCTTGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATTGATTT]

[+] EMBL CB642108             [TGCCCTAGAAGTTGAAAGTTCCAATGAAATATTACCCCGCCAAACAACATCATTAAAGAGAAACAATGATTCTCAGAGAGAGAAAAACCCTGATGAGGGCTCAGAATCCAAGGATGGTCCTGAAGGGTCACCTGCTGCTGCTGATGAAGCTGCAGATAAACTGAGTGCAGATCACTTTGATGGTAATGATGGCAGTCTTGCTTTGGTTGATAGTGCTGAAGTGGATGGTGATGATGTTATCTCAGATCCTCACACGGTTAGTGAGACAACTACAACTGATGGTGATAACTTGTCTCATTCTGGTAAAAAACAGAAACTAATTTCGAGGGCAGAGCAGCCCACTGGACACAATAGCAGTGATCAGGATGAATTGAGGACACGGAATAGTGATAATAGTAGAGGGAGGTCTGGTAGCAGCAAAGATAATCAAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCAAGATAGGCGGTCCAGGCGAATAAATGATGCAAGAAGGCATCATGATGGAGAAGACCGCAATTCTCGTCGGAAGGATGAGTACCTTCGAGACATCAAACCAGATGTGGAAAGATCACATTTGGCCTCCAGGAGTAGGGATGATACCTACCACCCTTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AK119472             [                                                                                                                                                                                                                           AGTGGATGGTGATGATGTTATCTCAGATCCTCACACGGTTAGTGAGACAACTACAACTGATGGTGACAACTTGTCTCATTCTGGTAAAAAACAGAAACTAATTTCTAGGGCAGAGCAGCCCACTGGACACAATAGCAGTGATCAGGATGAATTGAGGACACGGAATAGTGATAATAGTAGAGGGAGGTCTGGTAGCAGCAAAGATAATCAAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCAAGATAGGCGGTCCAGGCGAATAAATGATGCAAGAAGGCATCATGATGGAGAAGACCGCAATTCTCGTCGGAAGGATGAGTACCTTCGAGACATCAAACCAGATGTGGAAAGATCACATTTGGCCTCCAGGAGTAGGGATGATACCTACCACCCTTATGCAAACAGAGACAGGGACATGCGTGGCAGAAGTTATGATAGGGTAAGAGATACAGAAATTTGGCAGAGGAGAGAAGAAAGTGTTCACAACAGACGAGCAAAAGAGGAAGATGTGAGGCTCGAACACAATGCTGAAGTTGGTGCAAGGAATAGAAATAAGATGAGGCCACCTGTTGATCGGAATGATAGGATTGAAGATCCTCATGCAAGGAAGCGGTTGGATGATGGTGACTGGAGGGGCTCTAGACCAAGAGAGCGTGGTGATGTTGTTCTGAATCGTCGTGAAAATATAGATGATTCGCATATGAAGAGAAAGAAGGATGAAGAGAACATGAGGAGAATGAAACCTGAGAATGAAGACATAGTTCATGGACAGCATGGTTATAGAGGAAGGGATGACCCAAACAGAAGGAAGAGAGAGCGGGATGATGGAATTGATCAGAAAAGAAGAGATGACAATGCTAGGATGAGGGAGAAGGCTGATGATCGTTATCATACAAAGCATAAAGAGGATAACTGGCGACAGAGAGAAAGAGAGGACAGGCACAGGCCTAAGCATGACAACACTGTGACCCTTCAGAGAGATGAAGGAAGGGGATCTGGTCGGGGTGGACGGATTTTGGATGATAAATTAGTCACTAGCGGTAGGAAACAGGATGAGTCAAGATCTGCAGGATTAAGCAAAGAAGCGCAAGAGCGCAGCAGACAAAACGACCCTTTGAGGAGAGATCAAGGAGCAGAAGAAAATAACATGCAAAATAGAGGCCGTTCTGATGTACATCCACGTGATGAAAATCCAAATAACAGTGAGAGGAACACCAGGCAAGAAAAACCAAATAATACTCATGACGGTAACCGTCTATCGAGCAATTCTGGTGCTCGCCAAGTGAGTAGAGATAGATACCGGGAAAGCACAAGAAAGGGCAGAAGTTCTGATATTAATGAACATGATCTTCCCAAATCGAGCAAGAGGAGACGTGAAGACCATGAAAGTCATCGTGGTGGGAAGGTCGATGTGAAAGGAGTGAGCGAGCAAGAAAATAGTAGGGATCATACTGTGTCCTCCAAAAAGGGCCAGAATCCACAACGTGAATCATTTGTGAAACAAGCGGAAGAAGATCCCATGTCAGATGATGAAAACCATGAGGATTCAAGAAGGGGTCGCTCTAAGTTGGAGCGGTGGACGAGCCACAAAGAGATAGACTATAGTAGTATCGATAATGAAAATGCACCAACATTTTCTTCCATCAAATCAGATGTTCAAGCTCCTACTGCTGATGAGTTAGGTAAATCTGAAGCAGCTGCAGCTGGCAATTCAGAACTCAAGAGCGGTGGCGATAATGGCCAAACATCTGAGAAGAACGCCGAAGAGCGTGATCGACATCTAGACACTGTTGAGAGGCTCAAGAGACGGAGTGAGCGTTTCAAACTTCCCATGCCTGGTGAGAAGGATGCACCGCAAAGCAAAAAGGTGGATACTGAAGTGCAACCTCCGCAAATCGAATCTGCTTCTGCTGATTTGGAAGTCAAGCCAGAGCGGCCAGCCCGCAAGAGGAGGTGGACTGGGAC TGGGAGCTAGCTTTGAGCTGACGGTCACTCGAAGGAATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAATCCATGTATGATTTTGCTGTTTAATTTATACATGTATGTGTTAACTTACAGAAATGTTTGATTTTTGGTTGGGGAACTGGATACTGTAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL AK064260             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CAAGATCTGCAGGATTAAGCAAAGAAGCGCAAGAGCGCAGCAGACAAAACGACCCTTTGAGGAGAGATCAAGGAGCAGAAGAAAATAACATGCAAAATAGAGGCCGTTCTGATGTACATCCACGTGATGAAAATCCAAATAACAGTGAGAGGAACACCAGGCAAGAAAAACCAAATAATACTCATGACGGTAACCGTCTATCGAGCAATTCTGGTGCTCGCCAAGTGAGTAGAGATAGATACCGGGAAAGCACAAGAAAGGGCAGAAGTTCTGATATTAATGAACATGATCTTCCCAAATCGAGCAAGAGGAGACGTGAAGACCATGAAAGTCATCGTGGTGGGAAGGTCGATGTGAAAGGAGTGAGCGAGCAAGAAAATAGTAGGGATCATACTGTGTCCTCCAAAAAGGGCCAGAATCCACAACGTGAATCATTTGTGAAACAAGCGGAAGAAGATCCCATGTCAGATGATGAAAACCATGAGGATTCAAGAAGGGGTCGCTCTAAGTTGGAGCGGTGGACGAGCCACAAAGAGATAGACTATAGTAGTATCGATAATGAAAATGCACCAACATTTTCTTCCATCAAATCAGATGTTCAAGCTCCTACTGCTGATGAGTTAGGTAAATCTGAAGCAGCTGCAGCTGGCAATTCAGAACTCAAGAGCGGTGGCGATAATGGCCAAACATCTGAGAAGAACGCCGAAGAGCGTGATCGACATCTAGACACTGTTGAGAGGCTCAAGAGACGGAGTGAGCGTTTCAAACTTCCCATGCCTGGTGAGAAGGATGCACCGCAAAGCAAAAAGGTGGATACTGAAGTGCAACCTCCGCAAATCGAATCTGCTTCTGCTGATTTGGAAGTCAAGCCAGAGCGGCCAGCCCGCAAGAGGAGGTGGACTGGGAC TGGGGGCTAGCTTTGAGCTGACGGTTACTCGAAGGAATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAATCCATGTATGATTTTGCTGTTTAATTTATACATGTATGTGTTAACTTACAGAAATGTTTGATTTTTGGTTGGGGAACTGGATACTGTATTTTTTTTACCCATTCATTTCCCCTAATGATTCCGGTGGTCCAAATGTGGCGCCGGTGCCAGTGTGCCACCAAAATCAGATGGCTCCAAGCCTTTTATGGAAAGCAGCTGATTGGAGTTCCCTGACTTGGTAGGACTGGTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCATTTGAAGAAGCAGGGGTGCCCCATGCAAGCAATCTTTTTCTTGTGATGAACTGCTGGTGATCTGGAGGCACTTGATTATTGTATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATACCAAGTTACCGCTTCTTGTGCATGGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGACCTGGGATGACTACCTACTGTGTGCCATAGTATGTTCTTGTACATTTTGATGAACCTACATTGACGTGCATAAAGTTAGTTCATAGTATGCAGCAAGACTGCAAGAGCTAGTGTAGAGCAGCATGGTATACTGAACATTTGGACGGATCAATAATGTATACATCTTAGGTAGTGGACAGTAGGGTTGCTTGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATTGATTT]
[+] EMBL C74661               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 AGCGGTGGACGAGCCACAAAGAGATAGACTATAGTAGTATCGATAATGAAAATGCACCAACATTTTCTTCCATCAAATCAGATGTTCAAGCTCCTACTGCTGATGAGTTAGGTAAATCTGAAGCAGCTGCAGCTGGCAATTCAGAACTCAAGAGCGGTGGCGATAATGGCCAAACATCTGAGAAGAACGCCGAAGAGCGTGATCGACATCTAGACACTGTTGAGAGGCTCAAGAGACGGAGTGAGCGTTTCAAACTTCCCATGCCTGGTGAGAAGGATGCACCGCAAAGCAAAAAGGTGGATACTGAAGTGC ACCTCCGCAAATCGAATCTGCTTCTGCTGATTTGGAAGTCAAGCCAGAGCGGCCAG CCGCAAGAGGANGTGGACTGGGACTTGGGAGCTAGCTTT AGCTGACCGGNACTCGAA GAATTACCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]




>consensus_9004#0
TGCCCTAGAAGTTGAAAGTTCCAATGAAATATTACCCCGCCAAACAACATCATTAAAGAG
AAACAATGATTCTCAGAGAGAGAAAAACCCTGATGAGGGCTCAGAATCCAAGGATGGTCC
TGAAGGGTCACCTGCTGCTGCTGATGAAGCTGCAGATAAACTGAGTGCAGATCACTTTGA
TGGTAATGATGGCAGTCTTGCTTTGGTTGATAGTGCTGAAGTGGATGGTGATGATGTTAT
CTCAGATCCTCACACGGTTAGTGAGACAACTACAACTGATGGTGATAACTTGTCTCATTC
TGGTAAAAAACAGAAACTAATTTCGAGGGCAGAGCAGCCCACTGGACACAATAGCAGTGA
TCAGGATGAATTGAGGACACGGAATAGTGATAATAGTAGAGGGAGGTCTGGTAGCAGCAA
AGATAATCAAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCAAGATAGGCGGTCCAGGCG
AATAAATGATGCAAGAAGGCATCATGATGGAGAAGACCGCAATTCTCGTCGGAAGGATGA
GTACCTTCGAGACATCAAACCAGATGTGGAAAGATCACATTTGGCCTCCAGGAGTAGGGA
TGATACCTACCACCCTTATGCAAACAGAGACAGGGACATGCGTGGCAGAAGTTATGATAG
GGTAAGAGATACAGAAATTTGGCAGAGGAGAGAAGAAAGTGTTCACAACAGACGAGCAAA
AGAGGAAGATGTGAGGCTCGAACACAATGCTGAAGTTGGTGCAAGGAATAGAAATAAGAT
GAGGCCACCTGTTGATCGGAATGATAGGATTGAAGATCCTCATGCAAGGAAGCGGTTGGA
TGATGGTGACTGGAGGGGCTCTAGACCAAGAGAGCGTGGTGATGTTGTTCTGAATCGTCG
TGAAAATATAGATGATTCGCATATGAAGAGAAAGAAGGATGAAGAGAACATGAGGAGAAT
GAAACCTGAGAATGAAGACATAGTTCATGGACAGCATGGTTATAGAGGAAGGGATGACCC
AAACAGAAGGAAGAGAGAGCGGGATGATGGAATTGATCAGAAAAGAAGAGATGACAATGC
TAGGATGAGGGAGAAGGCTGATGATCGTTATCATACAAAGCATAAAGAGGATAACTGGCG
ACAGAGAGAAAGAGAGGACAGGCACAGGCCTAAGCATGACAACACTGTGACCCTTCAGAG
AGATGAAGGAAGGGGATCTGGTCGGGGTGGACGGATTTTGGATGATAAATTAGTCACTAG
CGGTAGGAAACAGGATGAGTCAAGATCTGCAGGATTAAGCAAAGAAGCGCAAGAGCGCAG
CAGACAAAACGACCCTTTGAGGAGAGATCAAGGAGCAGAAGAAAATAACATGCAAAATAG
AGGCCGTTCTGATGTACATCCACGTGATGAAAATCCAAATAACAGTGAGAGGAACACCAG
GCAAGAAAAACCAAATAATACTCATGACGGTAACCGTCTATCGAGCAATTCTGGTGCTCG
CCAAGTGAGTAGAGATAGATACCGGGAAAGCACAAGAAAGGGCAGAAGTTCTGATATTAA
TGAACATGATCTTCCCAAATCGAGCAAGAGGAGACGTGAAGACCATGAAAGTCATCGTGG
TGGGAAGGTCGATGTGAAAGGAGTGAGCGAGCAAGAAAATAGTAGGGATCATACTGTGTC
CTCCAAAAAGGGCCAGAATCCACAACGTGAATCATTTGTGAAACAAGCGGAAGAAGATCC
CATGTCAGATGATGAAAACCATGAGGATTCAAGAAGGGGTCGCTCTAAGTTGGAGCGGTG
GACGAGCCACAAAGAGATAGACTATAGTAGTATCGATAATGAAAATGCACCAACATTTTC
TTCCATCAAATCAGATGTTCAAGCTCCTACTGCTGATGAGTTAGGTAAATCTGAAGCAGC
TGCAGCTGGCAATTCAGAACTCAAGAGCGGTGGCGATAATGGCCAAACATCTGAGAAGAA
CGCCGAAGAGCGTGATCGACATCTAGACACTGTTGAGAGGCTCAAGAGACGGAGTGAGCG
TTTCAAACTTCCCATGCCTGGTGAGAAGGATGCACCGCAAAGCAAAAAGGTGGATACTGA
AGTGCAACCTCCGCAAATCGAATCTGCTTCTGCTGATTTGGAAGTCAAGCCAGAGCGGCC
AGCCCGCAAGAGGAGGTGGACTGGGACTGGGAGCTAGCTTTGAGCTGACGGTCACTCGAA
GGAATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTAC
AACTGGAAGTGGAATCCATGTATGATTTTGCTGTTTAATTTATACATGTATGTGTTAACT
TACAGAAATGTTTGATTTTTGGTTGGGGAACTGGATACTGTATTTTTTTTACCCATTCAT
TTCCCCTAATGATTCCGGTGGTCCAAATGTGGCGCCGGTGCCAGTGTGCCACCAAAATCA
GATGGCTCCAAGCCTTTTATGGAAAGCAGCTGATTGGAGTTCCCTGACTTGGTAGGACTG
GTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCATTTGAAGAAGCAGGGGTGCCCC
ATGCAAGCAATCTTTTTCTTGTGATGAACTGCTGGTGATCTGGAGGCACTTGATTATTGT
ATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATACCAAGTTACCGCTTCTTGTGCAT
GGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGACCTGGGATGACTACCTACTGTG
TGCCATAGTATGTTCTTGTACATTTTGATGAACCTACATTGACGTGCATAAAGTTAGTTC
ATAGTATGCAGCAAGACTGCAAGAGCTAGTGTAGAGCAGCATGGTATACTGAACATTTGG
ACGGATCAATAATGTATACATCTTAGGTAGTGGACAGTAGGGTTGCTTGTCTAGTGGAAT
TTTGCTTATGACGATAACCCAGATTGATTT

consensusID : consensus_9004#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 617
fasta sequence 
                              [GAGACAAGGGGAGGTGGACTGGGACTGGGAGCTAGCTNTGAGCTGACGGTCACTCGAAGGAATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAATCCATGACTGGTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCATTTGAAGAAGCAGGGGTGCCCCATGCAAGCAATCTTTTTCTTATGATGAACTGCTGGTGATCTGGAGGCACTTGATTATTGTATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATACCAAGTTACCGCTTCTTGTGCATGGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGACCTGGGATGACTACCTACTGTGTGCCATAGTATGTTCTTGTACATTTTGATGAACCTACATTGACGTGCATAAAGTTAGTTCATAGTATGCAGCAAGACTGCAAGAGAGCTAGTGTAGAGCTGCATGGTATACTGAACAGTTGGACGGATCAATAATGTATACATTTTAGGTAGTGGACAGTAGGGTTGCTTGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATTGATTTGACTCCGATCAAAAAAAAAAAAA]

[-] EMBL CA760601             [GAGACAAGGGGAGGTGGACTGGGACTGGGAGCTAGCTNTGAGCTGACGGTCACTCGAAGGAATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAATCCATGACTGGTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCATTTGAAGAAGCAGGGGTGCCCCATGCAAGCAATCTTTTTCTTATGATGAACTGCTGGTGATCTGGAGGCACTTGATTATTGTATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATACCAAGTTACCGCTTCTTGTGCATGGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGACCTGGGATGACTACCTACTGTGTGCCATAGTATGTTCTTGTACATTTTGATGAACCTACATTGACGTGCATAAAGTTAGTTCATAGTATGCAGCAAGACTGCAAGAGAGCTAGTGTAGAGCTGCATGGTATACTGAACAGTTGGACGGATCAATAATGTATACATTTTAGGTAGTGGACAGTAGGGTTGCTTGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATTGATTTGACTCCGATCAAAAAAAAAAAAA]




>consensus_9004#1
GAGACAAGGGGAGGTGGACTGGGACTGGGAGCTAGCTNTGAGCTGACGGTCACTCGAAGG
AATTACCTGCGGAATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAA
CTGGAAGTGGAATCCATGACTGGTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCA
TTTGAAGAAGCAGGGGTGCCCCATGCAAGCAATCTTTTTCTTATGATGAACTGCTGGTGA
TCTGGAGGCACTTGATTATTGTATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATAC
CAAGTTACCGCTTCTTGTGCATGGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGA
CCTGGGATGACTACCTACTGTGTGCCATAGTATGTTCTTGTACATTTTGATGAACCTACA
TTGACGTGCATAAAGTTAGTTCATAGTATGCAGCAAGACTGCAAGAGAGCTAGTGTAGAG
CTGCATGGTATACTGAACAGTTGGACGGATCAATAATGTATACATTTTAGGTAGTGGACA
GTAGGGTTGCTTGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATTGATTTGACTCC
GATCAAAAAAAAAAAAA

consensusID : consensus_9004#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 310
fasta sequence 
                              [AGGTCTGGTAGCAGCCAAGATAATCCAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCCAGATAGGCGGTCCAGGCGAATAAATGATGCTAGAAGGCATCATGATGGAGAAGACCGCAAGTTCTCGTCGGAAGGATGAGTACCTTCGAGGACATCACGAACCACGAGTGTTGGAAAGAGTCACACTTTGGCCTCCACGGAGTAGGGATGATACCCCCCACCCCTTAGTGCCAACCACGAGACCACGGGACATGCGTGGCAGAATTATGATAGGGTAAGAGATACAGAAATTTGGCAGAAGAAAAAAAAAA]

[+] EMBL BI812739             [AGGTCTGGTAGCAGCCAAGATAATCCAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCCAGATAGGCGGTCCAGGCGAATAAATGATGCTAGAAGGCATCATGATGGAGAAGACCGCAAGTTCTCGTCGGAAGGATGAGTACCTTCGAGGACATCACGAACCACGAGTGTTGGAAAGAGTCACACTTTGGCCTCCACGGAGTAGGGATGATACCCCCCACCCCTTAGTGCCAACCACGAGACCACGGGACATGCGTGGCAGAATTATGATAGGGTAAGAGATACAGAAATTTGGCAGAAGAAAAAAAAAA]




>consensus_9004#2
AGGTCTGGTAGCAGCCAAGATAATCCAAAACGTCTTGAATCTGGTGAAGAAGTTCTGCCA
GATAGGCGGTCCAGGCGAATAAATGATGCTAGAAGGCATCATGATGGAGAAGACCGCAAG
TTCTCGTCGGAAGGATGAGTACCTTCGAGGACATCACGAACCACGAGTGTTGGAAAGAGT
CACACTTTGGCCTCCACGGAGTAGGGATGATACCCCCCACCCCTTAGTGCCAACCACGAG
ACCACGGGACATGCGTGGCAGAATTATGATAGGGTAAGAGATACAGAAATTTGGCAGAAG
AAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9004#0      TGCCCTAGAAGTTGAAAGTTCCAATGAAATATTACCCCGCCAAACAACATCATTAAAGAG 60
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AAACAATGATTCTCAGAGAGAGAAAAACCCTGATGAGGGCTCAGAATCCAAGGATGGTCC 120
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TGAAGGGTCACCTGCTGCTGCTGATGAAGCTGCAGATAAACTGAGTGCAGATCACTTTGA 180
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TGGTAATGATGGCAGTCTTGCTTTGGTTGATAGTGCTGAAGTGGATGGTGATGATGTTAT 240
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      -----------------------------------------------GAGACAAGGGGAG 13
                                                                                  

consensus_9004#0      CTCAGATCCTCACACGGTTAGTGAGACAACTACAACTGATGGTGATAACTTGTCTCATTC 300
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      GTGGACTGGGACTGGGAGCTAGCTNTGAGCTGACGGTCACTCGAAGGAATTACCTGCGGA 73
                                                                                  

consensus_9004#0      TGGTAAAAAACAGAAACTAATTTCGAGGGCAGAGCAGCCCACTGGACACAATAGCAGTGA 360
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ATATCATGACGGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAAT 133
                                                                                  

consensus_9004#0      TCAGGATGAATTGAGGACACGGAATAGTGATAATAGTAGAGGGAGGTCTGGTAGCAGCAA 420
consensus_9004#2      -------------------------------------------AGGTCTGGTAGCAGCCA 17
consensus_9004#1      CCATGACTGGTGCTTCGACAACAATTTCGTGGGTTCCAGGAGCTGCATTTGAAGAAGCAG 193
                                                                  *   * * ** ***  

consensus_9004#0      AGATAATCAA---AAACGTCTTGAATCTGGTGAAGAAGTTCTGCAAGATAGGCGGT-CCA 476
consensus_9004#2      AGATAATCCA---AAACGTCTTGAATCTGGTGAAGAAGTTCTGCCAGATAGGCGGT-CCA 73
consensus_9004#1      GGGTGCCCCATGCAAGCAATCTTTTTCTTATGATGAACTGCTGGTGATCTGGAGGCACTT 253
                       * *   * *   ** *    *   ***  *** *** * ***       ** **  *  

consensus_9004#0      GGCGAATAAATGATGCAAGAAGGCATC--ATGATGGAGAAG--ACCGCAA-TTCTCGTC- 530
consensus_9004#2      GGCGAATAAATGATGCTAGAAGGCATC--ATGATGGAGAAG--ACCGCAAGTTCTCGTC- 128
consensus_9004#1      GATTATTGTATGATTCCTGTTGCCATCTGATGTTGCAGAAGCTATACCAAGTTACCGCTT 313
                      *   * *  ***** *  *  * ****  *** ** *****  *   *** **  **   

consensus_9004#0      -----GGAAGGATGAGTACCTTC-GAG-ACATCA--AACCAGATGTG---GAAAGA-TCA 577
consensus_9004#2      -----GGAAGGATGAGTACCTTC-GAGGACATCACGAACCACGAGTGTTGGAAAGAGTCA 182
consensus_9004#1      CTTGTGCATGGAAGCATGGCATCTGACTGCGAGGTAGATCTTTACGACCTGGGATGACTA 373
                           * * *** *  *  * ** **   *       * *          *  *     *

consensus_9004#0      CA-TTTGGCCTCCA-GGAGTAGGGATG---ATACCTACCACCCTT--ATGCAAACAGAGA 630
consensus_9004#2      CACTTTGGCCTCCACGGAGTAGGGATG---ATACCCCCCACCCCTTAGTGCCAACCACGA 239
consensus_9004#1      CCTACTGTGTGCCATAGTATGTTCTTGTACATTTTGATGAACCTACATTGACGTGCATAA 433
                      *    **    ***  *  *     **   **       * **     **         *

consensus_9004#0      CA----GGGACA-TGCGTGGCAGAAGTTATGATAGGGTAAGAGATACAGAAATTTGGCAG 685
consensus_9004#2      GACCACGGGACA-TGCGTGGCAGAA-TTATGATAGGGTAAGAGATACAGAAATTTGGCAG 297
consensus_9004#1      AGTTAGTTCATAGTATGCAGCAAGA-CTGCAAGAGAGCTAGTG-TAGAGCTGCATGGTAT 491
                               * * *  *  ***  *  *   * ** *  ** * ** **     *** * 

consensus_9004#0      AGGAGAGAAGAAAGTGTTCACAACAGACGAGCAAAAGAGGAAGATGTGAGGCTCGAACAC 745
consensus_9004#2      AAGAAAAAAAAAA----------------------------------------------- 310
consensus_9004#1      ACTGAACAGTTGGACGGATCAATAATGTATACATTTTAGGTAGTGGACAGTAGGGTTGCT 551
                      *    * *                                                    

consensus_9004#0      AATGCTGAAGTTGGTGCAAGGAATAGAAATAAGATGAGGCCACCTGTTGATCGGAATGAT 805
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      TGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATTGATTTGACTCCGATCAAAAAAA 611
                                                                                  

consensus_9004#0      AGGATTGAAGATCCTCATGCAAGGAAGCGGTTGGATGATGGTGACTGGAGGGGCTCTAGA 865
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      AAAAAA------------------------------------------------------ 617
                                                                                  

consensus_9004#0      CCAAGAGAGCGTGGTGATGTTGTTCTGAATCGTCGTGAAAATATAGATGATTCGCATATG 925
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AAGAGAAAGAAGGATGAAGAGAACATGAGGAGAATGAAACCTGAGAATGAAGACATAGTT 985
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      CATGGACAGCATGGTTATAGAGGAAGGGATGACCCAAACAGAAGGAAGAGAGAGCGGGAT 1045
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GATGGAATTGATCAGAAAAGAAGAGATGACAATGCTAGGATGAGGGAGAAGGCTGATGAT 1105
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      CGTTATCATACAAAGCATAAAGAGGATAACTGGCGACAGAGAGAAAGAGAGGACAGGCAC 1165
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AGGCCTAAGCATGACAACACTGTGACCCTTCAGAGAGATGAAGGAAGGGGATCTGGTCGG 1225
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GGTGGACGGATTTTGGATGATAAATTAGTCACTAGCGGTAGGAAACAGGATGAGTCAAGA 1285
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TCTGCAGGATTAAGCAAAGAAGCGCAAGAGCGCAGCAGACAAAACGACCCTTTGAGGAGA 1345
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GATCAAGGAGCAGAAGAAAATAACATGCAAAATAGAGGCCGTTCTGATGTACATCCACGT 1405
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GATGAAAATCCAAATAACAGTGAGAGGAACACCAGGCAAGAAAAACCAAATAATACTCAT 1465
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GACGGTAACCGTCTATCGAGCAATTCTGGTGCTCGCCAAGTGAGTAGAGATAGATACCGG 1525
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GAAAGCACAAGAAAGGGCAGAAGTTCTGATATTAATGAACATGATCTTCCCAAATCGAGC 1585
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AAGAGGAGACGTGAAGACCATGAAAGTCATCGTGGTGGGAAGGTCGATGTGAAAGGAGTG 1645
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AGCGAGCAAGAAAATAGTAGGGATCATACTGTGTCCTCCAAAAAGGGCCAGAATCCACAA 1705
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      CGTGAATCATTTGTGAAACAAGCGGAAGAAGATCCCATGTCAGATGATGAAAACCATGAG 1765
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GATTCAAGAAGGGGTCGCTCTAAGTTGGAGCGGTGGACGAGCCACAAAGAGATAGACTAT 1825
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AGTAGTATCGATAATGAAAATGCACCAACATTTTCTTCCATCAAATCAGATGTTCAAGCT 1885
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      CCTACTGCTGATGAGTTAGGTAAATCTGAAGCAGCTGCAGCTGGCAATTCAGAACTCAAG 1945
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AGCGGTGGCGATAATGGCCAAACATCTGAGAAGAACGCCGAAGAGCGTGATCGACATCTA 2005
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GACACTGTTGAGAGGCTCAAGAGACGGAGTGAGCGTTTCAAACTTCCCATGCCTGGTGAG 2065
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AAGGATGCACCGCAAAGCAAAAAGGTGGATACTGAAGTGCAACCTCCGCAAATCGAATCT 2125
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GCTTCTGCTGATTTGGAAGTCAAGCCAGAGCGGCCAGCCCGCAAGAGGAGGTGGACTGGG 2185
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      ACTGGGAGCTAGCTTTGAGCTGACGGTCACTCGAAGGAATTACCTGCGGAATATCATGAC 2245
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GGATTGCACACTTCACACCATGTTTGTTCTGTTACAACTGGAAGTGGAATCCATGTATGA 2305
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TTTTGCTGTTTAATTTATACATGTATGTGTTAACTTACAGAAATGTTTGATTTTTGGTTG 2365
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GGGAACTGGATACTGTATTTTTTTTACCCATTCATTTCCCCTAATGATTCCGGTGGTCCA 2425
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      AATGTGGCGCCGGTGCCAGTGTGCCACCAAAATCAGATGGCTCCAAGCCTTTTATGGAAA 2485
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GCAGCTGATTGGAGTTCCCTGACTTGGTAGGACTGGTGCTTCGACAACAATTTCGTGGGT 2545
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TCCAGGAGCTGCATTTGAAGAAGCAGGGGTGCCCCATGCAAGCAATCTTTTTCTTGTGAT 2605
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GAACTGCTGGTGATCTGGAGGCACTTGATTATTGTATGATTCCTGTTGCCATCTGATGTT 2665
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GCAGAAGCTATACCAAGTTACCGCTTCTTGTGCATGGAAGCATGGCATCTGACTGCGAGG 2725
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TAGATCTTTACGACCTGGGATGACTACCTACTGTGTGCCATAGTATGTTCTTGTACATTT 2785
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      TGATGAACCTACATTGACGTGCATAAAGTTAGTTCATAGTATGCAGCAAGACTGCAAGAG 2845
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      CTAGTGTAGAGCAGCATGGTATACTGAACATTTGGACGGATCAATAATGTATACATCTTA 2905
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GGTAGTGGACAGTAGGGTTGCTTGTCTAGTGGAATTTTGCTTATGACGATAACCCAGATT 2965
consensus_9004#2      ------------------------------------------------------------
consensus_9004#1      ------------------------------------------------------------
                                                                                  

consensus_9004#0      GATTT 2970
consensus_9004#2      -----
consensus_9004#1      -----


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)