cluster # 9015

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9015 cluster # 9015 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9015#0 length = 725 sequences # 6
consensusID : consensus_9015#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 725
fasta sequence
                              [GATCATGGCCTGCTCCGTCGACGTCTGCCATGGCGCCCGCGAGGGAGCATTTT-CCCGTCCTGATCCAGCGCCAGCTGATCACCGTCCCAAAGACGACGACGTCTACGTTCCCGGTGGCGG-TGGTGAGGGCGGCTACGGGCCTCGGGGACCCTGCTACGATCCCCTGAT-CCCCGGCCAC-GGCGGTGGCCTAATACCCATCAGGCCTGATCTCCCCGCCCCCGGCTATGGACGCGGACGCTATCCCTGCTTCCGACCTCTCCCCTACCATCCCACGCCGCCGCTGCCGCCACCGCAGAATGGGGACACCCCGCCGCCGTGATCGAGCATGGCCGGCCGCCGCGACGACGACCTCACGCGACCCAATGCACCCTATAAGCTACCCCTC-CATCCCAAAAAGAGTTCAATTGTAACTATGAATCTGAACACACATGTGTCGAGGTTCGTAGTTAGAAATTGGCTTTGTATGGGACGGAATAGTATACGCGTATACGTATGTATGTATCTATATATGTCGAGGGCACGTATGTACGTACGTACGTATATACGTTGATCTCTCGCAGGTACTAGAACGTATACTTGTTACTAGCTATATGGATCATATATACCGTTCTTCCGTCTTCCATGTGCTAGTGTTCATTAGCAGGAATAAAACGGATAGGTGGGTGCGTGAGTGTGTGTGACTGGTTTCAAACAAATAAAGTGCCGCTGTGTTAATTGTCGAAAAA]

[+] EMBL AK120112             [GATCATGGCCTGCTCCGTCGACGTCTGCCATGGCGCCCGCGAGGGAGCATTTT CCCGTCCTGATCCAGCGCCAGCTGATCACCGTCCCAAAGACGACGACGTCTACGTTCCCGGTGGCGG TGGTGAGGGCGGCTACGGGCCTCGGGGACCCTGCTACGATCCCCTGAT CCCCGGCCAC GGCGGTGGCCTAATACCCATCAGGCCTGATCTCCCCGCCCCCGGCTATGGACGCGGACGCTATCCCTGCTTCCGACCTCTCCCCTACCATCCCACGCCGCCGCTGCCGCCACCGCAGAATGGGGACACCCCGCCGCCGTGATCGAGCATGGCCGGCCGCCGCGACGACGACCTCACGCGACCCAATGCACCCTATAAGCTACCCCTC CATCCCAAAAAGAGTTCAATTGTAACTATGAATCTGAACACACATGTGTCGAGGTTCGTAGTTAGAAATTGGCTTTGTATGGGACGGAATAGTATACGCGTATACGTATGTATGTATCTATATATGTCGAGGGCACGTATGTACGTACGTACGTATATACGTTGATCTCTCGCAGGTACTAGAACGTATACTTGTTACTAGCTATATGGATCATATATACCGTTCTTCCGTCTTCCATGTGCTAGTGTTCATTAGCAGGAATAAAACGGATAGGTGGGTGCGTGAGTGTGTGTGACTGGTTTCAAACAAATAAAGTGCCGCTGT                ]
[+] EMBL CF316240             [GATCATGGCCTGCTCCGTCGACGTCTGCCATGGCGCCCGCGAGGGAGCATTTT CCCGTCCTGATCCAGCGCCAGCTGATCACCGTCCCAAAGACGACGACGTCTACGTTCCCGGTGGCGGNTGGTGAGGGCGGCTACGGGCCTCGGGGACCCTGCTACGATCCCCTGAT CCCCGGCCACGGGCGGTGGCCTAATACCCATCAGGCCTGATCTCCCCGCCCCCGGCTATGGACGCGGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL OSS14114A            [GATCATGGCCTGCTCCGTCGACGTCTGCCATGGCGCCCGCNAGGNAGCATTTT CCCGTCCTGATCCAGCGCCA CTATTCACCGTNCCAAAGACGACGANGTNTACGTTCCCGGTGGCGG TGGTTAGGGCGGCTACGGGCCTCGGGGACCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AK062563             [ggTCATGGCCTGCTCCGTCGACGTCTGCCATGGCGCCCGCGAGGGAGCATTTT CCCGTCCTGATCCAGCGCCAGCTGATCACCGTCCCAAAGACGACGACGTCTACGTTCCCGGTGGCGG TGGTGAGGGCGGCTACGGGCCTCGGGGACCCTGCTACGATCCCCTGAT CCCCGGCCAC GGCGGTGGCCTAATACCCATCAGGCCTGATCTCCCCGCCCCCGGCTATGGACGCGGACGCTATCCCTGCTTCCGACCTCTCCCCTACCATCCCACGCCGCCGCTGCCGCCACCGCAGAATGGGGACACCCCGCCGCCGTGATCGAGCATGGCCGGCCGCCGCGACGACGACCTCACGCGACCCAATGCACCCTATAAGCTACCCCTC CATCCCAAAAAGAGTTCAATTGTAACTATGAATCTGAACACACATGTGTCGAGGTTCGTAGTTAGAAATTGGCTTTGTATGGGACGGAATAGTATACGCGTATACGTATGTATGTATCTATATATGTCGAGGGCACGTATGTACGTACGTACGTATATACGTTGATCTCTCGCAGGTACTAGAACGTATACTTGTTACTAGCTATATGGATCATATATACCGTTCTTCCGTCTTCCATGTGCTAGTGTTCATTAGCAGGAATAAAACGGATAGGTGGGTGCGTGAGTGTGTGTGACTGGTTTCAAACAAATAAAGTGCCGCTGT                ]
[+] EMBL AU096525             [                                     CGCGAGGGAGCATTTTCCCCGTCCTGATCCAGCGCCAGCTGATCACCGTCCCAAAGACGACGACGTCTACGTTCCCGGTGGCGG TGGTGAGGGCGGCTACGGGCCTCGGGGACCCTGCTACGATCCCCTGATCCCCCGGCCAC GGCGGTGGCCTAATACCCATCAGGCCTGATCTCCCCGCCCCCGGCTATGGACGCGGACGCTATCCCTGCTTCCGACCTCTCCCCTACCATCCCACGCCGCCG TGCCGCCACCGCAGAATGGGGACACCCCGCCGCCGTGATCGAGCATGGCCGGCCGCCGCGACGACGACNTCACGCGACCCAATGCACCCTATAAGCTACCCCTC CATCCCAAAAAGAGTTCAATTGTAACTATGAATCTGAACACACATGTGTCGAGGTTCGTAGTTAGAAATTGGCTTTGTATGGGACGGAATAGTATACGCGTATACGTATGTATGTATCTATATATGTCGAGGGCACGTATGTACGTACGTACGTATATACGTTGATCTCTCGCAGGTACTAGAACGTATACTTGTTACTAGCTATATGGATCATATATACCGTTCTTCCGTCTTCCATGTGCTAGTGTTCATTAGCAGGAATAAAACGGATAGGTGGGTGCGTGAGTGTGTGTGACTGGTTTCAAACAAATAAAGTGCCGCTGTGTTAATTGTCGAAAAA]
[-] EMBL CF316241             [                                                                                                                                                                                                                                                                                                                                       GCATGGCCGGCCGCCGCGACGACGACCTCACGCGACCCAATGCACCCTATAAGCTACCCCTCTCATCCCAAAAAGAGTTCAATTGTAACTATGAATCTGAACACACATGTGTCGAGGTTCGTAGTTAGAAATTGGCTTTGTATGGGACGGAATAGTATACGCGTATACGTATGTATGTATCTATATATGTCGAGGGCACGTATGTACGTACGTACGTATATACGTTGATCTCTCGCAGGTACTAGAACGTATACTCGTTACTAGCTATATGGATCATATATACCGTTCTTCCGTCTTCCATGTGCCAGTGTTCATTAGCAGGAATAAAACGGATAGGTGGGTGCGTGAGTGTGTGTGACTGGTTTCAAACAAATAAAGTGCCGCTGTGTTAATTGTCGAAAAA]




>consensus_9015#0
GATCATGGCCTGCTCCGTCGACGTCTGCCATGGCGCCCGCGAGGGAGCATTTTCCCGTCC
TGATCCAGCGCCAGCTGATCACCGTCCCAAAGACGACGACGTCTACGTTCCCGGTGGCGG
TGGTGAGGGCGGCTACGGGCCTCGGGGACCCTGCTACGATCCCCTGATCCCCGGCCACGG
CGGTGGCCTAATACCCATCAGGCCTGATCTCCCCGCCCCCGGCTATGGACGCGGACGCTA
TCCCTGCTTCCGACCTCTCCCCTACCATCCCACGCCGCCGCTGCCGCCACCGCAGAATGG
GGACACCCCGCCGCCGTGATCGAGCATGGCCGGCCGCCGCGACGACGACCTCACGCGACC
CAATGCACCCTATAAGCTACCCCTCCATCCCAAAAAGAGTTCAATTGTAACTATGAATCT
GAACACACATGTGTCGAGGTTCGTAGTTAGAAATTGGCTTTGTATGGGACGGAATAGTAT
ACGCGTATACGTATGTATGTATCTATATATGTCGAGGGCACGTATGTACGTACGTACGTA
TATACGTTGATCTCTCGCAGGTACTAGAACGTATACTTGTTACTAGCTATATGGATCATA
TATACCGTTCTTCCGTCTTCCATGTGCTAGTGTTCATTAGCAGGAATAAAACGGATAGGT
GGGTGCGTGAGTGTGTGTGACTGGTTTCAAACAAATAAAGTGCCGCTGTGTTAATTGTCG
AAAAA
clustalw multiple alignements is not computed in this case