These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9019#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2720 fasta sequence [GCAGGCTCGCAGTGCTCGTGCGACGACAGAGAGGCGAGGAACAGAGAGAGGGGGGAAAGCGAAACGTACAAATTCAAAATCACTCCCCAATTTCCCCCGAATAATTCCACCGTCGCCTAAAGCCAGTTTCATCGGGAACGCCTCGAATTTTCCGATCCCTAGGCGGGCGGGCGGGGGAGGTGGAGTGCCCGCGGCGCGGCGCGGCGGTGGTTAGGGTTTGGGGCTCGTCGGCGTCGGCGAGGGCGGAGGGGGGGGGGATGGATCCGGAGCAGACGTTCCTGCGGGTGCACGCGCGGCTGTCCGGGATGCTGTCGCAGCTGCTCACGCCGCGGATCCGCCTCGCGCTCGAGTACCTCTACCTCGCCGGCGCCGTCGCGCTCTTCTGCCTGCTCGTCGTCATGCACACCAACTTCGTGCAGCAGCCTGGCTGTTCAAGCGAGTTTTCTGGGATTGAATTTGGTGAAGCGCAACTTGTCCAAATCAAGATAATCAGTGGTGGACTATGGGTCAGCAAAGGTGCATCCTACATTATGGATCTTCAGAACCTGGGGCGTTCAGCTGAGAAAATTCTAGAGGTTAATGGTGATAGGTTCAATATTTTGGCATCTAAGTTTTGGTCAACTTGGGTTGGTCCTGGAGCTAGAAGGAGCAAAATTATGTTCAGAACTTGGAAGGGAGACAAGGAATTTGAACCACAACCAGAGAATGCAGCTGACACAGCTATTACCGCAACCACTTCAGGAGTATCGGATTCGAAGACAACTGTGGAGGGTTCTGCATACCATCCATTATCCGCAAAAGAATCATTTAAAGCAGCAGTTATGTATTTATTCAGAAAGTGGTACTTTCGTGTTGTCTCGTTCTGGAGGAATATAAAACAACTTTCAGATAATACTTTTCAATTAATGTTCAGATCAAACTGGAATGACTTCCTCCATACCATCAAGGGTATTCAATTACCAAGCGTGGATCATCTTGTTTCAACAATAGTACAGTGGTTTGAGAGACGAAGCAAAGCATTTGAACCTACCTATTTATATGGTGTGGAGAAGGGATATTTCTTGCTTTCAGAAGGGGCCAAAGTTCGTCATGGTGTTCGGACTATAAATATCACAATTTCTGCTCGAAATCCTTGCTTTGGAAATAGGTGGCAACAGCTTTTAATAAACAGCATTGTTGGCTATGACACTATACTTACAAACAGCTTAGTGAACTCCCCTGGTCATGGCTATTTATACAACTTTCAAACAAAGGAGCTTTATGATCTCAGTTACGGACATGAACCACCAGCAGGTCCAACAAGATTTGGAGATTATTTTGTGACGAAATGTGGTGTACTTTTAATGTCACTCTTTGTTTTTTTCACAACCACCATGTCTGTTTCATTTACCCTGAGAGAGACGCAATCCCGCATGCTTAGGTTCACAGTGCAGCTTCAACATCATGCACGCCACCAACTCCCCACATTTCAACTGATATTTGTCCATGTTATCGAATCATTGGTTTTTGTTCCGATAATGATTGGGATCCTCTTTTTTCTATTTGAGTTCTATGATGATCAGTTGCTTGCATTTCTAGTTTTGACTCTTGTATGGTTGTGTGAGCTATTTACGATGATCAGTGTGAGGACATCTATATCAATGCAGTTCTTCCCGCGCTTTTTCTTGCTGTATTTCTTGGTTTTCCACATTTACTTCTTCTCGTACACATATGGCTTCTCCTACCTGGCCTTTTCTGCCACCGCGGCGTTCATGCAACATCTAATTTTATATTTTTGGAACCGCTTCGAGGTGCCAGCCCTTCAGAGATTCATTAGAAGCCGAGCTCACCTTCACCAACAAACGGGTGTTCAGATCACATCCTCAACCATCTATACATCAACATTACATATAGCAAGGGTAAATATGAGGGACCCTGGCGCAATGAATGAGGGCCTTGGTGCTGCTCGTGAAGCAGATGCCCTGCTGGTTCCGGATGAGCCTAACAGGAACCAACAAGAGGGTCAACCAATTGAAAATGCAGAGTTAGTGGCCAACAATCCTCTGCACTATCAAGATCAAAACCCTCAGCAACCTGGCAATGCTCCGGCAGGCTCTGGCTCCTTGAATCCATTTGGTTCCCTTTTATTGTGGTTGCTAGGAGGCGGAGCTTCTGATGGCATAGTATCTTTCTTCTCTATGTTTAGAGATGTCCGTGATCATGGTCAAGATTACACTGATCCACCTCGAAATGAAAATGGTCAGGTAACATAGAAAATATAGGAAGGAAAACAGAAGGGAATTGCAGACGAAGAACACTGGTGGAGGGCGGTTGGGCGAAAGTTGCCTATGTTATTAAGCAAGCTGATATGTTGCCCGCTCCACCATCAAAGGATAATGACGAATATGCATTGCAGACTTGTGTCGGCTGAACATACCGCGTTAAGCTGCAGAATCTGTTAATTTCTTTTCTTTTTCGTTGTTGAGTAAGGTTGCTGAATTGTACCTACTCATGACATGTGTACATTCCCTACCGTCTGAATGGGCAAGCCCGGCCTA-TTCTTGTACAGAAATGTTCTTCAGCTCATCTCATTTTGCTTTTTCTGTTGAAATCTTTTGTACCCTATATAGGTTGGAACTGCAACATGCAGTATTGCAGGCTTGCGCTGCGCT-CCTGTGTGTTCTACAAAAGAATTGTGTAGCTTGTCAATGCAATTTTGTGCTGACAAATTATATTCGATT] [+] EMBL AK067560 [GCAGGCTCGCAGTGCTCGTGCGACGACAGAGAGGCGAGGAACAGAGAGAGGGGGGAAAGCGAAACGTACAAATTCAAAATCACTCCCCAATTTCCCCCGAATAATTCCACCGTCGCCTAAAGCCAGTTTCATCGGGAACGCCTCGAATTTTCCGATCCCTAGGCGGGCGGGCGGGGGAGGTGGAGTGCCCGCGGCGCGGCGCGGCGGTGGTTAGGGTTTGGGGCTCGTCGGCGTCGGCGAGGGCGGAGGGGGGGGGGATGGATCCGGAGCAGACGTTCCTGCGGGTGCACGCGCGGCTGTCCGGGATGCTGTCGCAGCTGCTCACGCCGCGGATCCGCCTCGCGCTCGAGTACCTCTACCTCGCCGGCGCCGTCGCGCTCTTCTGCCTGCTCGTCGTCATGCACACCAACTTCGTGCAGCAGCCTGGCTGTTCAAGCGAGTTTTCTGGGATTGAATTTGGTGAAGCGCAACTTGTCCAAATCAAGATAATCAGTGGTGGACTATGGGTCAGCAAAGGTGCATCCTACATTATGGATCTTCAGAACCTGGGGCGTTCAGCTGAGAAAATTCTAGAGGTTAATGGTGATAGGTTCAATATTTTGGCATCTAAGTTTTGGTCAACTTGGGTTGGTCCTGGAGCTAGAAGGAGCAAAATTATGTTCAGAACTTGGAAGGGAGACAAGGAATTTGAACCACAACCAGAGAATGCAGCTGACACAGCTATTACCGCAACCACTTCAGGAGTATCGGATTCGAAGACAACTGTGGAGGGTTCTGCATACCATCCATTATCCGCAAAAGAATCATTTAAAGCAGCAGTTATGTATTTATTCAGAAAGTGGTACTTTCGTGTTGTCTCGTTCTGGAGGAATATAAAACAACTTTCAGATAATACTTTTCAATTAATGTTCAGATCAAACTGGAATGACTTCCTCCATACCATCAAGGGTATTCAATTACCAAGCGTGGATCATCTTGTTTCAACAATAGTACAGTGGTTTGAGAGACGAAGCAAAGCATTTGAACCTACCTATTTATATGGTGTGGAGAAGGGATATTTCTTGCTTTCAGAAGGGGCCAAAGTTCGTCATGGTGTTCGGACTATAAATATCACAATTTCTGCTCGAAATCCTTGCTTTGGAAATAGGTGGCAACAGCTTTTAATAAACAGCATTGTTGGCTATGACACTATACTTACAAACAGCTTAGTGAACTCCCCTGGTCATGGCTATTTATACAACTTTCAAACAAAGGAGCTTTATGATCTCAGTTACGGACATGAACCACCAGCAGGTCCAACAAGATTTGGAGATTATTTTGTGACGAAATGTGGTGTACTTTTAATGTCACTCTTTGTTTTTTTCACAACCACCATGTCTGTTTCATTTACCCTGAGAGAGACGCAATCCCGCATGCTTAGGTTCACAGTGCAGCTTCAACATCATGCACGCCACCAACTCCCCACATTTCAACTGATATTTGTCCATGTTATCGAATCATTGGTTTTTGTTCCGATAATGATTGGGATCCTCTTTTTTCTATTTGAGTTCTATGATGATCAGTTGCTTGCATTTCTAGTTTTGACTCTTGTATGGTTGTGTGAGCTATTTACGATGATCAGTGTGAGGACATCTATATCAATGCAGTTCTTCCCGCGCTTTTTCTTGCTGTATTTCTTGGTTTTCCACATTTACTTCTTCTCGTACACATATGGCTTCTCCTACCTGGCCTTTTCTGCCACCGCGGCGTTCATGCAACATCTAATTTTATATTTTTGGAACCGCTTCGAGGTGCCAGCCCTTCAGAGATTCATTAGAAGCCGAGCTCACCTTCACCAACAAACGGGTGTTCAGATCACATCCTCAACCATCTATACATCAGCATTACATATAGCAAGGGTAAATATGAGGGACCCTGGCGCAATGAATGAGGGCCTTGGTGCTGCTCGTGAAGCAGATGCCCTGCTGGTTCCGGATGAGCCTAACAGGAACCAACAAGAGGGTCAACCAATTGAAAATGCAGAGTTAGTGGCCAACAATCCTCTGCACTATCAAGATCAAAACCCTCAGCAACCTGGCAATGCTCCGGCAGGCTCTGGCTCCTTGAATCCATTTGGTTCCCTTTTATTGTGGTTGCTAGGAGGCGGAGCTTCTGATGGCATAGTATCTTTCTTCTCTATGTTTAGAGATGTCCGTGATCATGGTCAAGATTACACTGATCCACCTCGAAATGAAAATGGTCAGGTAACATAGAAAATATAGGAAGGAAAACAGAAGGGAATTGCAGACGAAGAACACTGGTGGAGGGCGGTTGGGCGAAAGTTGCCTATGTTATTAAGCAAGCTGATATGTTGCCTGCTCCACCATCAAAGGATAATGACGAATATGCATTGCAGACTTGTGTCGGCTGAACATACCGCGTTAAGCTGCAGAATCTGTTAATTTCTTTTCTTTTTCGTTGTTGAGTAAGGTTGCTGAATTGTACCTACTCATGACATGTGTACATTCCCTACCGTCTGAATGGGCAAGCCCGGCCTA TTCTTGTACAGAAATGTTCTTCAGCTCATCTCATTTTGCTTTTTCTGTTGAAATCTTTTGTACCCTATATAGGTTGGAACTGCAACATGCAGTATTGCAGGCTTGCGCTGCGCT CCTGTGTGTTCTACAAAAGAATTGTGTAGCTTGTCAATGCAATTTTGTGCTGACAAATTATATTCGATT] [+] EMBL CB629474 [ GGTGCACGCGCGGCTGTCCGGGATGCTGTCGCAGCTGCTCACGCCGCGGATCCGCCTCGCGCTCGAGTACCTCTACCTCGCCGGCGCCGTCGCGCTCTTCTGCCTGCTCGTCGTCATGCACACCAACTTCGTGCAGCAGCCTGGCTGTTCAAGCGAGTTTTCTGGGATTGAATTTGGTGAAGCGCAACTTGTCCAAATCAAGATAATCAGTGGTGGACTATGGGTCAGCAAAGGTGCATCCTACATTATGGATCTTCAGAACCTGGGGCGTTCAGCTGAGAAAATTCTAGAGGTTAATGGTGATAGGTTCAATATTTTGGCATCTAAGTTTTGGTCAACTTGGGTTGGTCCTGGAGCTAGAAGGAGCAAAATTATGTTCAGAACTTGGAAGGGAGACAAGGAATTTGAACCACAACCAGAGAATGCAGCTGACACAGCTATTACCGCAACCACTTCAGGAGTATCGGATTCGAAGACAACTGTGGAGGGTTCTGCATACCATCCATTATCCGCAAAAGAATCATTTAAAGCAGCAGTTATGTATTTATTCAGAAAGTGGTACTTTCGTGTTGTCTCGTTCTGGAGGAATATAAAACAACTTTCAGATAATACTTTTCAATTAATGTTCAGATCAAACTGGAATGACTTCCTCCATACCATCAAGGGTATTCAATTACCAAGCGTGGATCATCTTGTTTCAACAATAGTACAGTGGTTTGAGAGACGAAGCAAAGCATTTGAACCTACCTATTTATATGGTGTGGAGAAGGGA ] [+] EMBL AK120170 [ ATCCTACATTATGGATCTTCAGAACCTGGGGCGTTCAGCTGAGAAAATTCTAGAGGTTAATGGTTATAGGTTCAATATTTTGGCATCTAAGTTTTGGTCAACTTGGGTTGGTCCTGGAGCTAGAAGGAGCAAAATTATGTTCAGAACTTGGAAGGGAGACAAGGAATTTGAACCACAACCAGAGAATGCAGCTGACACAGCTATTACCGCAACCACTTCAGGAGTATCGGATTCGAAGACAACTGTGGAGGGTTCTGCATACCATCCATTATCCGCAAAAGAATCATTTAAAGCAGCAGTTATGTATTTATTCAGAAAGTGGTACTTTCGTGTTGTCTCGTTCTGGAGGAATATAAAACAACTTTCAGATAATACTTTTCAATTAATGTTCAGATCAAACTGGAATGACTTCCTCCATACCATCAAGGGTATTCAATTACCAAGCGTGGATCATCTTGTTTCAACAATAGTACAGTGGTTTGAGAGACGAAGCAAAGCATTTGAACCTACCTATTTATATGGTGTGGAGAAGGGATATTTCTTGCTTTCAGAAGGGGCCAAAGTTCGTCATGGTGTTCGGACTATAAATATCACAATTTCTGCTCGAAATCCTTGCTTTGGAAATAGGTGGCGACAGCTTTTAATAAACAGCATTGTTGGCTATGACACTATACTTACAAACAGCTTAGTGAACTCCCCTGGTCATGGCTATTTATACAACTTTCAAACAAAGGAGCTTTATGATCTCAGTTACGGACATGAACCACCAGCAGGTCCAACAAGATTTGGAGATTATTTTGTGACGAAATGTGGTGTACTTTTAATGTCACTCTTTGTTTTTTTCACAACCACCATGTCTGTTTCATTTACCCTGAGAGAGACGCAATCCCGCATGCTTAGGTTCACAGTGCAGCTTCAACATCATGCACGCCACCAACTCCCCACATTTCAACTGATATTTGTCCATGTTATCGAATCATTGGTTTTTGTTCCGATAATGATTGGGATCCTCTTTTTTCTATTTGAGTTCTATGATGATCAGTTGCTTGCATTTCTAGTTTTGACTCTTGTATGGTTGTGTGAGCTATTTACGATGATCAGTGTGAGGACATCTATATCAATGCAGTTCTTCCCGCGCTTTTTCTTGCTGTATTTCTTGGTTTTCCACATTTACTTCTTCTCGTACACATATGGCTTCTCCTACCTGGCCTTTTCTGCCACCGCGGCGTTCATGCAACATCTAATTTTATATTTTTGGAACCGCTTCGAGGTGCCAGCCCTTCAGAGATTCATTAGAAGCCGAGCTCACCTTCACCAACAAACGGGTGTTCAGATCACATCCTCAACCATCTATACATCAACATTACATATAGCAAGGGTAAATATGAGGGACCCTGGCGCAATGAATGAGGGCCTTGGTGCTGCTCGTGAAGCAGATGCCCTGCTGGTTCCGGATGAGCCTAACAGGAACCAACAAGAGGGTCAACCAATTGAAAATGCAGAGTTAGTGGCCAACAATCCTCTGCACTATCAAGATCAAAACCCTCAGCAACCTGGCAATGCTCCGGCAGGCTCTGGCTCCTTGAATCCATTTGGTTCCCTTTTATTGTGGTTGCTAGGAGGCGGAGCTTCTGATGGCATAGTATCTTTCTTCTCTATGTTTAGAGATGTCCGTGATCATGGTCAAGATTACACTGATCCACCTCGAAATGAAAATGGTCAGGTAACATAGAAAATATAGGAAGGAAAACAGAAGGGAATTGCAGACGAAGAACACTGGTGGAGGGCGGTTGGGCGAAAGTTGCCTATGTTATTAAGCAAGCTGATATGTTGCCCGCTCCACCATCAAAGGATAATGACGAATATGCATTGCAGACTTGTGTCGGCTGAACATACCGCGTTAAGCTGCAGAATCTGTTAATTTCTTTTCTTTTTCGTTGTTGAGTAAGGTTGCTGAATTGTACCTACTCATGACATGTGTACATTCCCTACCGTCTGAATGGGCAAGCCCGGC ] [+] EMBL C74938 [ GCTTGCATTTCTAGTTTTGACTCTTGTATGGTTGTGTGAGCTATTTACGATGATCAGTGTGAGGACATCTATATCAATGCAGTTCTTCCCGCGCTTTTTCTTGCTGTATTTCTTGGTTTTCCACATTTACTTCTTCTCGTACACATATGGCTTCTCCTACCTGGCCTTTTCTGCCACCGCGGCGTTCATGCAACATCTAATTTTATATTTTTGGAACCGCTTCGAGGTGCCAGCCCTTCAGAGATTCATTAGAAGCCGAGCTCACCTTCACCAACAAACGGGTGTTCAGATCACATCCTCAACCATCTATACATCAACATTACATATAGCAAGGGTAAATATGAGGGACCCTGGCGCAATGAATGAGGGCCTTGGTGCTGCTCGTGAAGCAGATGCCCTGCTGGTTCCGGATGAGCCTAACAGGAACCAACAAGAGGGTCAACCAATTGA ] [-] EMBL CB629475 [ TACATATAGCAAGGGTAAATATGAGGGACCCTGGCGCAATGAATGAGGGCCTTGGTGCTGCTCGTGAAGCAGATGCCCTGCTGGTTCCGGATGAGCCTAACAGGAACCAACAAGAGGGTCAACCAATTGAAAATGCAGAGTTAGTGGCCAACAATCCTCTGCACTATCAAGATCAAAACCCTCAGCAACCTGGCAATGCTCCGGCAGGCTCTGGCTCCTTGAATCCATTTGGTTCCCTTTTATTGTGGTTGCTAGGAGGCGGAGCTTCTGATGGCATAGTATCTTTCTTCTCTATGTTTAGAGATGTCCGTGATCATGGTCAAGATTACACTGATCCACCTCGAAATGAAAATGGTCAGGTAACATAGAAAATATAGGAAGGAAAACAGAAGGGAATTGCAGACGAAGAACACTGGTGGAGGGCGGTTGGGCGAAAGTTGCCTATGTTATTAAGCAAGCTGATATGTTGCCCGCTCCACCATCAAAGGATAATGACGAATATGCATTGCAGACTTGTGTCGGCTGAACATACCGCGTTAAGCTGCAGAATCTGTTAATTTCTTTTCTTTTTCGTTGTTGAGTAAGGTTGCTGAATTGTACCTACTCATGACATGTGTACATTCCCTACCGTCTGAATGGGCAAGCCCGGCCTA TTCTTGTACAGAAATGTTCTTCAGCTCATCTCATTTTGCTTTTTCTGTTGAAATCTTTTGTACCCTATATAGGTTGGAACTGCAACATGCAGTATTGCAGGCTTGCGCTGCGCTCCCTGTGTGTTCT ] [+] EMBL CA766281 [ ATTGAAAATGCAGAGTTAGTGGCCAACAATCCTCTGCACTATCAAGATCAAAACCCTCAGCAACCTGGCAATGCTCCGGCAGGCTCTGGCTCCTTGAATCCATTTGGTTCCCTTTTATTGTGGTTGCTAGGAGGCGGAGCTTCTGATGGCATAGTATCTTTCTTCTCTATGTTTAGAGATGTCCGTGATCATGGTCAAGATTACACTGATCCACCTCGAAATGAAAATGGTCAGGTAACATAGAAAATATAGGAAGGAAAACAGAAGGGAATTGCAGACGAAGAACACTGGTGGAGGGCGGTTGGGCGAAAGTTGCCTATGTTATTAAGCAAGCTGATATGTTGCCCGCTCCACCATCAAAGGATAATGACGAATATGCATTGCAGACTTGTGTCGGCTGAACATACCGCGTTAAGCTGCAGAATCTGTTAATTTCTTTTCTTTTTCGTTGTTGAGTAAGGTTGCTGAATTGTACCTACTCATGACATGTGTACATTCCCTACCGTCTGAATGGGCAAGCCCGGCCTATTTCTTGTACAGAAATGTTCTTCAGCTCATCTCATTTTGCTTTTTCTGTTGAAATCCTTTGTACCCTATATAGGTTGGAACTGCAACATGCAGTATTGCAGGCTTGCGCTGCGCT CCTGTGTGTTCTACAAAAGAATTGTGTAGCTTGTCAATGCAATTTTGTGCTGACA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||