cluster # 9021

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 9021 cluster # 9021 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9021#0 length = 1871 sequences # 6
consensusID : consensus_9021#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1871
fasta sequence
                              [CGCACACGCATCCCGACGCCGCCGCGAGGCCGCGGCCGCCGCCGGCGACGATGGATCTCCCGCCGCTCTCCCACCAGGCGCTCTTCGCCGCCGTCCGATCCGCGGACGCCGCCGCCGTCGCCGGCCTCCTGGCCGACGCCGGGGCGTCCGGGCCCACCACCCAGGCGCTCGCCGCCGCGCAGACGGACGCCGGGGAGACGGCGCTGTACGTCGCGGCGGAGGCCGGCTCCGAGGAGATCGTCCGCCTCCTCATCCCGCTCTACGACCTCGAGGCCGCCACCGTCCGCTCCCGCCTCGACCTCGACGCCTTCCACGTCGCCGCCAAGCAAGGCCACACCGGGGCTGTGAAGGAGTTCTTGGGGCGGTGGCCGGAGCTATGTTCAATCTGTGACTCTTCCAATACTAGCCCTCTTTACTCTGCAGCAGTAAAAGATCACTTGGATGTAGTTAACGCCATACTGGACACTGATGACAGCTGCATAAGGATTGTGCGGAAAAATGGGAAGACATCACTACACACTGCTGCAAGAATCGGTTACCATCGTATTGTCAAAGCACTTATAGAAAGGGATCCGGGGATTGTTCCAATCAGAGATAGGAAGGGACAGACTGCACTTCACATGGCTGTAAAAGGTAAAAATACAGATGTAGTTGAAGAGTTACTGATGGCTGATGTTTCCATACTCGATGTGCGTGACAAGAAGGCAAATACAGCTTTGCACATAGCTACACGAAAATGGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGCTTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTACTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCCAGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTACTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAGGGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCTGGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTTATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGGTGGCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTACCTGCTAATGTGTACTAGTATTAGCACTTA-ACAATGAAGAGCACCTATGCAGTTTGAAGCTAAGGTTACAA]

[+] EMBL AK120217             [CGCACACGCATCCCGACGCCGCCGCGAGGCCGCGGCCGCCGCCGGCGACGATGGATCTCCCGCCGCTCTCCCACCAGGCGCTCTTCGCCGCCGTCCGATCCGCGGACGCCGCCGCCGTCGCCGGCCTCCTGGCCGACGCCGGGGCGTCCGGGCCCACCACCCAGGCGCTCGCCGCCGCGCAGACGGACGCCGGGGAGACGGCGCTGTACGTCGCGGCGGAGGCCGGCTCCGAGGAGATCGTCCGCCTCCTCATCCCGCTCTACGACCTCGAGGCCGCCACCGTCCGCTCCCGCCTCGACCTCGACGCCTTCCACGTCGCCGCCAAGCAAGGCCACACCGGGGCTGTGAAGGAGTTCTTGGGGCGGTGGCCGGAGCTATGTTCAATCTGTGACTCTTCCAATACTAGCCCTCTTTACTCTGCAGCAGTAAAAGATCACTTGGATGTAGTTAACGCCATACTGGACACTGATGACAGCTGCATAAGGATTGTGCGGAAAAATGGGAAGACATCACTACACACTGCTGCAAGAATCGGTTACCATCGTATTGTCAAAGCACTTATAGAAAGGGATCCGGGGATTGTTCCAATCAGAGATAGGAAGGGACAGACTGCACTTCACATGGCTGTAAAAGGTAAAAATACAGATGTAGTTGAAGAGTTACTGATGGCTGATGTTTCCATACTCGATGTGCGTGACAAGAAGGCAAATACAGCTTTGCACATAGCTACACGAAAATGGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGCTTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTACTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCCAGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTACTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAGGGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCTGGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTTATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGGTGGCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTACCTGCTAATGTGTACTAGTATTAGCACTTA ACAATGAAGAGCACCTATGCAGTTTGAAGCTATGGTTAC  ]
[+] EMBL CA999198             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  GGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGCTTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCNAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTACTATGGGAGCAAC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CA763902             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            CTGAGAAAGTTCCTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATGCACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCAAGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAATAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCTATTCAGTTACTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCCAGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTACTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCGCCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCGTCGGAGGGCCAATCATGATTGGTACTCTCTTGGTCCTGGCCTATCTGGTGNTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTNCTGGTCTATNCATGANGGGATATCAGACCTGGAAGCATTCTCTGATCATGANAANANAA TTATG CCTGTANATTGGAAAA GNCTTGCTTTAACTGCATGT ACACTT ANAACATGTAATTGGATG AAAC ATCAT CCTGGATATAGTGGCTCA CTGgt                                                                                                                                                     ]
[+] EMBL CB096888             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   GCCCTTTTCATTTCCCTTGCAGTGGTCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGATGCTCAAAAGCGGGTTATCAAGATTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGGCCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAGGGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCAAGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCTGGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTTATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTCTTAGGTCTGTGGTGAGGTGCCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTACCTGCTAATGTGTACTAGTATTAGCACTTA ACAATGCAGAGCACCTATGCAGTTTGAA             ]
[-] EMBL CB665000             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            AGGGCAAGTGGCAGCAAGTCCTTCTCGTGGTGTATCCATGAGGGGATATCAGACCTGGAAGCATTCTGTGATCATGAGAAGAGAATTTACGCCCCGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACCCTTAAGAACATGTAATTGGAGGAAAACAATCATCCCGGTATATATTTGGTCAGCCGTTTTAGGTATGTGGTGAGGTGGCCCAAGCAGACCTTTTTTTGCACCATCCTGATGGTTTGTGTACTTGGATACTTGGTCCCTGCTAATGTGTAATAGTATTAGCACTTAGACAATGAAGAGCCCCTATGCAGTTTGAAGgtta        ]
[+] EMBL C97744               [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAATTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGGTGGCCCAAGCANNCCTTTTTCTGCNCCATCTTNATGGTTTNTGTACTTGGATACTTGGTNCCTGCTAATGTGTACTAGTATTAGCNCTTA ACAATGAAGAGCNCCTGTGCAGTTTNAAGCTAAaaaaaaaa]




>consensus_9021#0
CGCACACGCATCCCGACGCCGCCGCGAGGCCGCGGCCGCCGCCGGCGACGATGGATCTCC
CGCCGCTCTCCCACCAGGCGCTCTTCGCCGCCGTCCGATCCGCGGACGCCGCCGCCGTCG
CCGGCCTCCTGGCCGACGCCGGGGCGTCCGGGCCCACCACCCAGGCGCTCGCCGCCGCGC
AGACGGACGCCGGGGAGACGGCGCTGTACGTCGCGGCGGAGGCCGGCTCCGAGGAGATCG
TCCGCCTCCTCATCCCGCTCTACGACCTCGAGGCCGCCACCGTCCGCTCCCGCCTCGACC
TCGACGCCTTCCACGTCGCCGCCAAGCAAGGCCACACCGGGGCTGTGAAGGAGTTCTTGG
GGCGGTGGCCGGAGCTATGTTCAATCTGTGACTCTTCCAATACTAGCCCTCTTTACTCTG
CAGCAGTAAAAGATCACTTGGATGTAGTTAACGCCATACTGGACACTGATGACAGCTGCA
TAAGGATTGTGCGGAAAAATGGGAAGACATCACTACACACTGCTGCAAGAATCGGTTACC
ATCGTATTGTCAAAGCACTTATAGAAAGGGATCCGGGGATTGTTCCAATCAGAGATAGGA
AGGGACAGACTGCACTTCACATGGCTGTAAAAGGTAAAAATACAGATGTAGTTGAAGAGT
TACTGATGGCTGATGTTTCCATACTCGATGTGCGTGACAAGAAGGCAAATACAGCTTTGC
ACATAGCTACACGAAAATGGAGGCCCCAGATGGTACAACTTCTGCTTAGCTACGAGGCGC
TTGAAGTCAATGCTATCAATAATCAGAATGAAACAGCTATGGATTTGGCTGAGAAAGTTC
CTTATGGTGAGTCTAAAATGGAAATAATTGAGTGGCTGACAGAAGCTGGCGCAAAGAATG
CACGGAATGTGGGGAAAATTGATGAGGCATCAGAGCTTAGGAGAACCGTGAGTGATATCA
AGCACAATGTTCAAGCACAGCTCAATGAGAATGCCAAGACAAATAAAAGAGTGACAGGAA
TAGCCAAAGAGCTCCGGAAACTACACAGAGAAGCTGTTCAGAACACCATCAATTCAGTTA
CTATGGTAGCAACCCTGATTGCCTCCATCGCATTCGTAGCCATATTCAATTTGCCAGGCC
AGTACTATGTTGATAGGGATAGTGGGGGAGACATTGGTGAAGCCCACATAGCCAACCTTA
CTGGTTTCCGAGTTTTTTGTCTGCTGAATGCTACCGCCCTTTTCATTTCCCTTGCAGTGG
TCGTAGTTCAGATCACCTTGGTTGCCTGGGAAACCGGTGCTCAAAAGCGGGTTATCAAGA
TTGTAAATAAGCTGATGTGGTCAGCATGCCTTAGTACATGTGCGGCTTTTATCTCATTGG
CCTATGTGGTAGTTGGCCCCCAGAATGCCTGGATGGCTTTCACCATATCAGCCATCGGAG
GGCCAATCATGATTGGTACTCTCTTGTTCCTGGCCTATCTGTTGTTGCGCCCTCGCTTCA
AGTTTGGTGAAGATAGACAGCGGCGCATCAAAAGGGCAAGTGGCAGCAAGTCCTTCTCCT
GGTCTATCCATGAGGGGATATCAGACCTGGAAGCATTCTCTGATCATGAGAAGAGAATTT
ATGCCCTGTAGATTGTAAAAGGTCTTGCTTTAGCTGCATGTAACACTTAAGAACATGTAA
TTGGATGAAAACAATCATCCCTGTATATAGTTGCTCAGCTGTTTTAGGTCTGTGGTGAGG
TGGCCCAAGCAGACCTTTTTCTGCACCATCTTGATGGTTTGTGTACTTGGATACTTGGTA
CCTGCTAATGTGTACTAGTATTAGCACTTAACAATGAAGAGCACCTATGCAGTTTGAAGC
TAAGGTTACAA
clustalw multiple alignements is not computed in this case