Home
Who am I
Technology
EST Assembly
Contact

These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 903 cluster # 903       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_903#0 length = 664 sequences # 2  

consensusID : consensus_903#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 664
fasta sequence
                              [ATTTTTTGGATATATATTACTCCTTCCGTTCCTAAATATTTGACACCGTTGACTTTTTTAAACATGTTTGACCATTTGTCTTATTCAAAAAATAATTATTAATTATTTTCCTATCATTTGGTTCATTGTTAAATATACTTTTATGTATACACATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACGGTTAAACATATTGAAAAAGTCAACGACGTCAAATATTTAGGGATGGAGGGAGTATAATATTAGAACTCGTGATTACCTGAACTACCTTTTCAACTGTCTGACTGATAAGAAAGGAGTTGTTTGTGAAGTTGTCGTTTTCATACGGAGTATTCTGAAATATGTGTGATCCCTAACAGTAACAACGTGTTATTACTAGATCACAGTGACATAGAAATCTAATTGCTCTTAAACGAGGTAACAGCATAGTACTAGCTAGTAAAATTTTATTCCTTGTCGTGCGAGCCTGCCAGTAGGTGTAAATTTTTATTGCTTGTTGTATTACTGCACACAGGATTCACACCCGCCTGAGTTCTCCCCCAGGCCCCATCCATCCTCAGATGATACCTGAACTAATTAAATTTTATACATAAGCAGTAGTCGTTCTTAATCTATCTTATGTAGTATGAAAACCTGAACTTTGGTCCAATGC]

[+] EMBL AK066136             [ATTTTTTGGATATATATTACTCCTTCCGTTCCTAAATATTTGACACCGTTGACTTTTTTAAACATGTTTGACCATTTGTCTTATTCAAAAAATAATTATTAATTATTTTCCTATCATTTGGTTCATTGTTAAATATACTTTTATGTATACACATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACGGTTAAACATATTGAAAAAGTCAACGACGTCAAATATTTAGGGATGGAGGGAGTATAATATTAGAACTCGTGATTACCTGAACTACCTTTTCAACTGTCTGACTGATAAGAAAGGAGTTGTTTGTGAAGTTGTCGTTTTCATACGGAGTATTCTGAAATATGTGTGATCCCTAACAGTAACAACGTGTTATTACTAGATCACAGTGACATAGAAATCTAATTGCTCTTAAACGAGGTAACAGCATAGTACTAGCTAGTAAAATTTTATTCCTTGTCGTGCGAGCCTGCCAGTAGGTGTAAATTTTTATTGCTTGTTGTATTACTGCACACAGGATTCACACCCGCCTGAGTTCTCCCCCAGGCCCCATCCATCCTCAGATGATACCTGAACTAATTAAATTTTATACATAAGCAGTAGTCGTTCTTAATCTATCTTATGTAGTATGAAAACCTGAACTTTGGTCCAATGC]
[+] EMBL AK073219             [ATTTTTTGGATATATATTACTCCTTCCGTTCCTAAATATTTGACACCGTTGACTTTTTTAAACATGTTTGACCATTTGTCTTATTCAAAAAATAATTATTAATTATTTTCCTATCATTTGGTTCATTGTTAAATATACTTTTATGTATACACATAGTTTTACATATTTCACAAAAGTTTTTGAATAAGACGAACGGTTAAACATATTGAAAAAGTCAACGACGTCAAATATTTAGGGATGGAGGGAGTATAATATTAGAACTCGTGATTACCTGAACTACCTTTTCAACTGTCTGACTGATAAGAAAGGAGTTGTTTGTGAAGTTGTCGTTTTCATACGGAGTATTCTGAAATATGTGTGATCCCTAACAGTAACAACGTGTTATTACTAGATCACAGTGACATAGAAATCTAATTGCTCTTAAACGAGGTAACAGCATAGTACTAGCTAGTAAAATTTTATTCCTTGTCGTGCGAGCCTGCCAGTAGGTGTAAATTTTTATTGCTTGTTGTATTACTGCACACAGGATTCACACCCGCCTGAGTTCTCCCCCAGGCCCCATCCATCCTCAGATGATACCTGAACTAATTAAATTTTATACATAAGCAGTAGTCGTTCTTAATCTATCTTATGTAGTATGAAAACCTGAACTTTGGTCCA    ]


>consensus_903#0 ATTTTTTGGATATATATTACTCCTTCCGTTCCTAAATATTTGACACCGTTGACTTTTTTA AACATGTTTGACCATTTGTCTTATTCAAAAAATAATTATTAATTATTTTCCTATCATTTG GTTCATTGTTAAATATACTTTTATGTATACACATAGTTTTACATATTTCACAAAAGTTTT TGAATAAGACGAACGGTTAAACATATTGAAAAAGTCAACGACGTCAAATATTTAGGGATG GAGGGAGTATAATATTAGAACTCGTGATTACCTGAACTACCTTTTCAACTGTCTGACTGA TAAGAAAGGAGTTGTTTGTGAAGTTGTCGTTTTCATACGGAGTATTCTGAAATATGTGTG ATCCCTAACAGTAACAACGTGTTATTACTAGATCACAGTGACATAGAAATCTAATTGCTC TTAAACGAGGTAACAGCATAGTACTAGCTAGTAAAATTTTATTCCTTGTCGTGCGAGCCT GCCAGTAGGTGTAAATTTTTATTGCTTGTTGTATTACTGCACACAGGATTCACACCCGCC TGAGTTCTCCCCCAGGCCCCATCCATCCTCAGATGATACCTGAACTAATTAAATTTTATA CATAAGCAGTAGTCGTTCTTAATCTATCTTATGTAGTATGAAAACCTGAACTTTGGTCCA ATGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)