These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9039#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1480 fasta sequence [CACTATGCCGTTATCCTCTCTCTCCCTCCTCCCCCTCCACCGCGCTCCGCTCCCGCCAACTTCAAATTACCCGCCACCGCCGCCTCCCTCTCGCGCCCTCCTCCTCCCCCTCCTCCGCCACTCGCCGCTCGCGCGCCGCTCGCCCGTCTCCCGGGCGCGTGCCGTAGCAGCCGACGGCATGGCCGCGGCGACCGCGGCGGCGGAGACGCCGCCCACGCTGCTCGAGTACATGGGCCAGGCTGGCGCGGCCGACGACCTCGTCGTCCTCGTGGCGCACGTCCAGAGCGCGTGCAAGCGCATCGCCGCGCTCGTGGCGTCGCCCGGGAACGCCGAGCTGTCGCGGGGGAAGGCGGGGGGTGGTGTGGCGGTGGCGGCCGGGCGGGACGCGCCCAAGCCGCTCGACGAATTGTCGAATGAGATCATCTTGTCATCACTCCGAAGATCTGGAAAGGTTGCAGTGATGGCTTCTGAAGAAAATCATCTCCCCATTTGGGTTTCCAACGACAGCCCGTATGTTGTTGTTACGGATCCGCTTGATGGTTCTCGCAACATTGAGGTATCCATTCCCACCGGAACAATATTTGGGATATACAATAGGCTGGCAGAGCTTGACCATCTACCT-GAAGAGGAGAGAGCT-CAGCTCAATTCACTGCAAAGCGGCACTCACCTTGTCGCTTCGGGGTATGTGCTGTATTCATCTGCCACCATATTCTGTATCAGCTTCGGTGCAGGTACCCATGGCTTCACCTTGGATCACTTGACTGGAGAATTTGTTCTAACACATCCTTCCATCCAAATACCCCCAAGAGGACAGATATATTCGGTGAATGATGCGCGGTATTTCGACTGGCCTGAGGGCCTAAGGAAGTACATTGACACGATCAGACAAGGCAAGGGACAGCATCCGAAGAAGTACTCGGCACGG-TACGTGTGCTCGCTGGTTGCT-GATTTCCACCGGACGCTGATATACGGCGGAGTTGCCATGAACCCCAGGGATCACCTTCGGTTGGTCTATGAAGCAAATCCTCTGAGTTTCCTTGCTGAGCAGGCAGGGGGCAGGGGTTCAGATGGCAAGAGCAGAATCCTCTCGATTCAGCCTGTGAAGCTGCACCAGAGGCTGCCATTGTTCCTGGGAGGCATGGAGGACATGCTTGAGTTGGAAAGCTATGGAGATGTGCAACAGAAGGTTAATCCTGGATATGAGGTGTGAAGATATATAACCTTAGATAATGAGGTCTGAAGATAATGTAGCATGCGAAAAGAGAACAGGGGGACCTACTGGAGAACTCTGTATTTGCAAAACCGATGTTTTTACCTGTCAGGTTTTCT-GTTTTTGTCTCC-GCGACTATGCGGTTTCACTGTGTAATATAGCAGAAAAATTAGGCTGCATTTCTCCCGGTACGAAATGGAAGGGACAACACAAATT-TATATGTAATGCAT-CCTTTGGCTACATGGACACTTTTATCTGGCAAAAAAAAAA] [+] EMBL AK120722 [CACTATGCCGTTATCCTCTCTCTCCCTCCTCCCCCTCCACCGCGCTCCGCTCCCGCCAACTTCAAATTACCCGCCACCGCCGCCTCCCTCTCGCGCCCTCCTCCTCCCCCTCCTCCGCCACTCGCCGCTCGCGCGCCGCTCGCCCGTCTCCCGGGCGCGTGCCGTAGCAGCCGACGGCATGGCCGCGGCGACCGCGGCGGCGGAGACGCCGCCCACGCTGCTCGAGTACATGGGCCAGGCTGGCGCGGCCGACGACCTCGTCGTCCTCGTGGCGCACGTCCAGAGCGCGTGCAAGCGCATCGCCGCGCTCGTGGCGTCGCCCGGGAACGCCGAGCTGTCGCGGGGGAAGGCGGGGGGTGGTGTGGCGGTGGCGGCCGGGCGGGACGCGCCCAAGCCGCTCGACGAATTGTCGAATGAGATCATCTTGTCATCACTCCGAAGATCTGGAAAGGTTGCAGTGATGGCTTCTGAAGAAAATCATCTCCCCATTTGGGTTTCCAACGACAGCCCGTATGTTGTTGTTACGGATCCGCTTGATGGTTCTCGCAACATTGAGGTATCCATTCCCACCGGAACAATATTTGGGATATACAATAGGCTGGCAGAGCTTGACCATCTACCT GAAGAGGAGAGAGCT CAGCTCAATTCACTGCAAAGCGGCACTCACCTTGTCGCTTCGGGGTATGTGCTGTATTCATCTGCCACCATATTCTGTATCAGCTTCGGTGCAGGTACCCATGGCTTCACCTTGGATCACTTGACTGGAGAATTTGTTCTAACACATCCTTCCATCCAAATACCCCCAAGAGGACAGATATATTCGGTGAATGATGCGCGGTATTTCGACTGGCCTGAGGGCCTAAGGAAGTACATTGACACGATCAGACAAGGCAAGGGACAGCATCCGAAGAAGTACTCGGCACGG TACGTGTGCTCGCTGGTTGCT GATTTCCACCGGACGCTGATATACGGCGGAGTTGCCATGAACCCCAGGGATCACCTTCGGTTGGTCTATGAAGCAAATCCTCTGAGTTTCCTTGCTGAGCAGGCAGGGGGCAGGGGTTCAGATGGCAAGAGCAGAATCCTCTCGATTCAGCCTGTGAAGCTGCACCAGAGGCTGCCATTGTTCCTGGGAGGCATGGAGGACATGCTTGAGTTGGAAAGCTATGGAGATGTGCAACAGAAGGTTAATCCTGGATATGAGGTGTGAAGATATATAACCTTAGATAATGAGGTCTGAAGATAATGTAGCATGCGAAAAGAGAACAGGGGGACCTACTGGAGAACTCTGTATTTGCAAAACCGATGTTTTTACCTGTCAGGTTTTCT GTTTTTGTCTCC GCGACTATGCGGTTTCACTGTGTAATATAGCAGAAAAATTAGGCTGCATTTCTCCCGGTACGAAATGGAAGGGACAACACAAATT TATATGTAATGCAT CCTTTGGCTACATGGACAC ] [+] EMBL CB680485 [ CACCGCCCCTTCCCTCTCGCGCCCTCCTCCTCCCCCTCCTCCGCCACTCGCCGCTCGCGCGCCGCTCGCCCGTCTCCCGGCCGCGTGCCGTAGCAGCCGACGGCATGGCCGCGGCGACCGCGGCGGCGGAGACGCCGCCCACGCTGCTCGAGTACATGGGCCAGGCTGGCGCGGCCGACTACCTCGTCGTCCTCGTGGCGCACGTCCAGAGCGCGTGCAAGCGCATCGCCGCGCTCGTGGCGTCGCCCGGGAACGCCGAGCTGTCGCGGGGGAAGGCGGGGGGTGGTGTGGCG ] [+] EMBL AU065758 [ gGCCCAAGCCGCTCGACGAATTGTCGAATGAGATCATCTTGTCATCACTCCGAAGATCTGGAAAGGTTGCAGTGATGGCTTCTGAAGAAAATCATCTCCCCATTTGGGTTTCCAACGACAGCCCGTATGTTGTTGTTACGGATCCGNTTGATGGTTCTCGCAACATTGAGGTATCCATTCCCACCGGAACAATATTTGGGATATACAATAGGCTGGCAGAGCTTGACCATCTACCTCCAAGAGGAGAGAGCTNCAGTTCAATTCAattgc ] [+] EMBL BI809839 [ ACA CATCCGAAGAA TACTCGGCACGGTTACGTGT CTC CTGG TGCTGGATTTCCACC GAC CTGATATACGGTGGA TTCCCATGAACCCCAGGGATCA CTTC GTT GTCTATGATACAAATCCTCTGAGTTTCCTTGCTGGACAGCCAGGGGCCAGGGGTTCAGATGGCAAGAGCAGAATCCTCTCGATTCAGCCTGTGAAGCTGCACCAGAGGCTGCCATTGTTCCTGGGAGGCATGGA GACATGCTTGAGTTGGAAAGCTATGGAGATGTGCAACAGAA GTTAATCCTGGATATGAGGTGTGAAG ATATAACCTTAGATAATGAGGTCTGAAGATAATGTAGCATGCGAAAAGAGAACAGGGGGACCTACTGGAGAACTCTGTATTTGCAAAACC CCCTGTTTACCTGTCAGGTTTTCTGGTTTTTGTCTCC GCGACTATGCGGTTTCACTGTGTAATATAGCAGAAAAATTAGGCTGCATTTCTCCCGGTACGAAATGGAAGGGACAACACAAATTGGATATGTAATGCATGCCTTTGGCTACACCGCCCCTTTTATCTGGCAAAAAAAAAA] [+] EMBL AU173977 [ TCCTGGGAGGCATGGAGGACATGCTTGAGTTGGAAAGCTATGGAGATGTGCAACANAAGGTTAATCCTGGATATGAGGTGTGAAGATATATACCCTTAGATAATGAGGTCTGAAGATAATGTAGCATGNGAAAAGAGAACAGGGGGACCTACTGGAGAACTNTGTATTTGCAAANCCGATGTTTTTACCTGTCAGGTTTTCT GTTTTTGTCTCCAGCGNCTATCCGGTTTCTCTGTGTAATATAGCAGAAAAATTAGGNTGCNTTTCTCCCGGTACGAAATGGAAGGGNCAACACNAATT TATATGTAATGCAT CCTTTGGCTACAaaaaaaa ] [+] EMBL AK058691 [ AGATAATGAGGTCTGAAGATAATGTAGCATGCGAAAAGAGAACAGGGGGACCTACTGGAGAACTCTGTATTTGCAAAACCGATGTTTTTACCTGTCAGGTTTTCT GTTTTTGTCTCC GCGACTATGCGGTTTCACTGTGTAATATAGCAGAAAAATTAGGCTGCATTTCTCCCGGTACGAAATGGAAGGGACAACACAAATT TATATGTAATGCAT CCTTTGGCTACATGGACACTTTTATCTGca ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||