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These datas are free for academic use only, please contact me for any other use.

Oryza sativa
cluster # 904 cluster # 904       Sequences # 2       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_904#0 length = 878 sequences # 2  

consensusID : consensus_904#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 878
fasta sequence
                              [TTGGTGACGCCAATGGCGTTGGACGAGTCGTTCAAGAGGCCGGGCACCATCCCGTTCAAGTGGGAGCTCCAGCCAGGCGTCCCGAAGCAGCAACCACACCACGGCGGCGGCGGCGCCGCCGTCGGAAGTAGCAGTGCATCTTCTTCTCCGGCGCCGGCGCCGGCGGCAGCATCGACGCTGCTGCTCCCGCCGAGGCTCCTCGCGCCTCCTCCTGCAGCCGCGGCGTCCCATGGCGGCTGCGACACGGGGGCGAACATTCTCGCTTCGACGACGACGCCGTCGCCTTCGTCGTCGTCTCACCGGCGGTCCATGTCTGCGCGGTTCACGGCATCGCTGGTGCTGCCGTTCACGCGGCCGCGGCGGGGACGGTCAGCCAATTCAAAGGACGAGGACGACATAGCCTTCACGGTGCTCTATGGCGACAAGATTGTGTAAATATTCATACTCCCTTTATCCCAAAATGTTTGACGCCGTTGACTTTTTTAAAAATATTTGACTGTTCGTCTTATTTAAAAAAATTTAAATAATAATTAATTCTTTTCCTATCATTT-GATTTATTGTTAAATATACTTTTATATATGCATATAGTTTTACATATTT-CACAAAAGTTTTTGAATAAGACAAATGGTTAAACATACTTTAAAAAGTCAACAGCGTCAAACATTTAGGGAAGTAAGGAATATTTTGGGTCTATTTTCAAAATAAATTTTATTAAAGGTCGATTTGTCAGAATTTCGGCTGTTTTGATGTATATATGTGCTTTACGTGTCTAAATTCATAGAATAGAGAGTACTAAAGTAAGCACTGAGCACTGAGGCATCATTTCCTTCATTTCGGTTTCGAAAGGAGGTTGGAAAGAGACAATTGGAGCATTATGC]

[+] EMBL AK110581             [TTGGTGACGCCAATGGCGTTGGACGAGTCGTTCAAGAGGCCGGGCACCATCCCGTTCAAGTGGGAGCTCCAGCCAGGCGTCCCGAAGCAGCAACCACACCACGGCGGCGGCGGCGCCGCCGTCGGAAGTAGCAGTGCATCTTCTTCTCCGGCGCCGGCGCCGGCGGCAGCATCGACGCTGCTGCTCCCGCCGAGGCTCCTCGCGCCTCCTCCTGCAGCCGCGGCGTCCCATGGCGGCTGCGACACGGGGGCGAACATTCTCGCTTCGACGACGACGCCGTCGCCTTCGTCGTCGTCTCACCGGCGGTCCATGTCTGCGCGGTTCACGGCATCGCTGGTGCTGCCGTTCACGCGGCCGCGGCGGGGACGGTCAGCCAATTCAAAGGACGAGGACGACATAGCCTTCACGGTGCTCTATGGCGACAAGATTGTGTAAATATTCATACTCCCTTTATCCCAAAATGTTTGACGCCGTTGACTTTTTTAAAAATATTTGACTGTTCGTCTTATTTAAAAAAATTTAAATAATAATTAATTCTTTTCCTATCATTT GATTTATTGTTAAATATACTTTTATATATGCATATAGTTTTACATATTT CACAAAAGTTTTTGAATAAGACAAATGGTTAAACATACTTTAAAAAGTCAACAGCGTCAAACATTTAGGGAAGTAAGGAATATTTTGGGTCTATTTTCAAAATAAATTTTATTAAAGGTCGATTTGTCAGAATTTCGGCTGTTTTGATGTATATATGTGCTTTACGTGTCTAAATTCATAGAATAGAGAGTACTAAAGTAAGCACTGAGCACTGAGGCATCATTTCCTTCATTTCGGTTTCGAAAGGAGGTTGGAAAGAGACAATTGGAGCATTATGC]
[+] EMBL CA756434             [                CGTTGGACGAGTCGTTCAAGAGGCCGGGCACCATCCCGTTCAAGTGGGAGCTCCAGCCAGGCGTCCCGAAGCAGCAACCACACCACGGCGGCGGCGGCGCCGCCGTCGGAAGTAGCAGTGCATCTTCTTCTCCGGCGCCGGCGCCGGCGGCAGCATCGACGCTGCTGCTCCCGCCGAGGCTCCTCGCGCCTCCTCCTGCAGCCGCGGCGTCCCATGGCGGCTGCGACACGGGGGCGAACATTCTCGCTTCGACGACGACGCCGTCGCCTTCGTCGTCGTCTCACCGGCGGTCCATGTCTGCGCGGTTCACGGCATCGCTGGTGCTGCCGTTCACGCGGCCGCGGCGGGGACGGTCAGCCAATTCAAAGGACGAGGACGACATAGCCTTCACGGTGCTCTATGGCGACAAGATTGTGTAAATATTCATACTCCCTTTATCCCAAAATGTTTGACGCCGTTGACTTTTTTAAAAATATTTGACTGTTCGTCTTATTTAAAAAAATTTAAATAATAATTAATTCTTTTCCTATCATTTGGATTTA TGTTAAATATACTTTTATATATACCTATAGGTTTACATATTTCCACAAAGTTTTTTGAATAAGACAA                                                                                                                                                                                                                                                              ]


>consensus_904#0 TTGGTGACGCCAATGGCGTTGGACGAGTCGTTCAAGAGGCCGGGCACCATCCCGTTCAAG TGGGAGCTCCAGCCAGGCGTCCCGAAGCAGCAACCACACCACGGCGGCGGCGGCGCCGCC GTCGGAAGTAGCAGTGCATCTTCTTCTCCGGCGCCGGCGCCGGCGGCAGCATCGACGCTG CTGCTCCCGCCGAGGCTCCTCGCGCCTCCTCCTGCAGCCGCGGCGTCCCATGGCGGCTGC GACACGGGGGCGAACATTCTCGCTTCGACGACGACGCCGTCGCCTTCGTCGTCGTCTCAC CGGCGGTCCATGTCTGCGCGGTTCACGGCATCGCTGGTGCTGCCGTTCACGCGGCCGCGG CGGGGACGGTCAGCCAATTCAAAGGACGAGGACGACATAGCCTTCACGGTGCTCTATGGC GACAAGATTGTGTAAATATTCATACTCCCTTTATCCCAAAATGTTTGACGCCGTTGACTT TTTTAAAAATATTTGACTGTTCGTCTTATTTAAAAAAATTTAAATAATAATTAATTCTTT TCCTATCATTTGATTTATTGTTAAATATACTTTTATATATGCATATAGTTTTACATATTT CACAAAAGTTTTTGAATAAGACAAATGGTTAAACATACTTTAAAAAGTCAACAGCGTCAA ACATTTAGGGAAGTAAGGAATATTTTGGGTCTATTTTCAAAATAAATTTTATTAAAGGTC GATTTGTCAGAATTTCGGCTGTTTTGATGTATATATGTGCTTTACGTGTCTAAATTCATA GAATAGAGAGTACTAAAGTAAGCACTGAGCACTGAGGCATCATTTCCTTCATTTCGGTTT CGAAAGGAGGTTGGAAAGAGACAATTGGAGCATTATGC



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)