cluster # 9040

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Oryza sativa
cluster # 9040 cluster # 9040 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9040#0 length = 1586 sequences # 6
consensusID : consensus_9040#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1586
fasta sequence
                              [TCGCCGCCGCCGCCGCCGCGATGATGCAGTCGCACCACCCCTCGCCGGCGCGGCTGGGGCTGACGGCCTCGTCGCCGTCGCTCCCGCCCAACCCGGCTGCGGGGAATCCCACCTCCTCGCCGCCGCAGGGCAACCCTAGCGCGGCGGCGGCCGTGGGCGCTGCCGCTGCCGCTGCACCAACCCTAACTACATCGCCGTCGCTGCTGCCGCTCCTGCCGCCGCTCCCGCGGGCGCAGGCGCTCCTCCAGCTGATCTCCGCGCTCGCCTCCAACCTCTTCGAGCTCTCGCCGAGCCGCGCCGCGTGGATCTCGGCGTACCGGGGGTCACTCCCCACTTTCCTCCCCTCGCCGTCCTCCGCGCCGCCGCCGCCGCTCCCGGCCCCGATCTCCTCCACCAAGGAGGCGCTGTCGCTGCTCAACACGCTCCAGACCCAGCTCTTCGAGGCCGTCGCCGAGCTGCAGGAGACCCTCGACCTGCAGGACGCGCGCGCGCGCCTCGCCCGCGAGGCGCGCGCCAAGGACGCCTCGATCCTCGCCTTCGCCAAGAAGCTCCGCGAGGCGCACCACGTGCTCGACCGCCTCGTCGACGACTACGCCGACTACCGCCGCGACCCCAAGCGCCCGCGCGGCGCCGCGGCGGCGGAACGACCCCGAGCCGGTGTCAGACGGCGACTTTGGCGCGTCGCTGCACTCCAAGCTCAACCTGGACGACGTCCTGACGTACGCCCACCGCATAAGCTACACGACCTTCGCGCCGCCTGAGCATGGTGCTGGGCTGCCTCTGCGTGGGGCGTTGCCGCC-TGCTCCTCAGGAAAATGAGATGAGGATGTCGCAGCTGTATCAATTTGCGGATTTGGATGTTGGAGTGCCGAAATCCCAGGAAGCAAAGGAGAGGACTGCAGCAGAGGGAGATGCCACTCCGCTTTTTCAGCCTTCACCAACCCAGGAGGCAGCTGTGCTACCAATCACTGTGCCGCAT-CCGCAT-GGGTGGCGGAACGGGGCGCTGCCTCTCG-AAAT-CCCGTTGCCGCCGCCTGGATGGAAA-CCCGGGGA-CCCGATCACTCTACCGCCGGATGGCATTCTGGCTGGTGTCAAGGGTGAGGAGCCACGGGCCAGTGTGCAACAGATGCCGGTTGTGGTGCCAGCAATGGTGCCGAAGGCACAAGAACCGATACAGGTTCGGCATGTTGATCTTGACATTAACAATAGTTCTAGCAGTGATGAGTACAGTAGCGACGTCGGGAGCTCTGAAGAAGATGATGAGGATTAGTTCCTTGGTAAGCTATTTTATGATTCATGTTTCCATGCCGTTGTAGGTCATGTACTAGTAAGAACAAATAATGCAAGCTCTCATACATGATTATTCAAGATCATGCAGCAATATACTGGTATTGAATAGAATTGGGTGGCGTATCATGTATGTGTTGATTAATTAAACCATCTCACTAGTCAATTTGCTTCGATATATGTAATCAAGCATGATGGTCTAATTTCCTCAGGATGTGCTGGTGTTGTATCGTCAGAAACATGGCTTCTTTTATGGATATTTAAACTTGAACATGGTGTGTTTAATGTTTGAAAAAAAAAAAA]

[+] EMBL AK120729             [TCGCCGCCGCCGCCGCCGCGATGATGCAGTCGCACCACCCCTCGCCGGCGCGGCTGGGGCTGACGGCCTCGTCGCCGTCGCTCCCGCCCAACCCGGCTGCGGGGAATCCCACCTCCTCGCCGCCGCAGGGCAACCCTAGCGCGGCGGCGGCCGTGGGCGCTGCCGCTGCCGCTGCACCAACCCTAACTACATCGCCGTCGCTGCTGCCGCTCCTGCCGCCGCTCCCGCGGGCGCAGGCGCTCCTCCAGCTGATCTCCGCGCTCGCCTCCAACCTCTTCGAGCTCTCGCCGAGCCGCGCCGCGTGGATCTCGGCGTACCGGGGGTCACTCCCCACTTTCCTCCCCTCGCCGTCCTCCGCGCCGCCGCCGCCGCTCCCGGCCCCGATCTCCTCCACCAAGGAGGCGCTGTCGCTGCTCAACACGCTCCAGACCCAGCTCTTCGAGGCCGTCGCCGAGCTGCAGGAGACCCTCGACCTGCAGGACGCGCGCGCGCGCCTCGCCCGCGAGGCGCGCGCCAAGGACGCCTCGATCCTCGCCTTCGCCAAGAAGCTCCGCGAGGCGCACCACGTGCTCGACCGCCTCGTCGACGACTACGCCGACTACCGCCGCGACCCCAAGCGCCCGCGCGGCGCCGCGGCGGCGG ACGACCCCGAGCCGGTGTCAGACGGCGACTTTGGCGCGTCGCTGCACTCCAAGCTCAACCTGGACGACGTCCTGACGTACGCCCACCGCATAAGCTACACGACCTTCGCGCCGCCTGAGCATGGTGCTGGGCTGCCTCTGCGTGGGGCGTTGCCGCC TGCTCCTCAGGAAAATGAGATGAGGATGTCGCAGCTGTATCAATTTGCGGATTTGGATGTTGGAGTGCCGAAATCCCAGGAAGCAAAGGAGAGGACTGCAGCAGAGGGAGATGCCACTCCGCTTTTTCAGCCTTCACCAACCCAGGAGGCAGCTGTGCTACCAATCACTGTGCCGCAT CCGCAT GGGTGGCGGAACGGGGCGCTGCCTCTCG AAAT CCCGTTGCCGCCGCCTGGATGGAAA CCCGGGGA CCCGATCACTCTACCGCCGGATGGCATTCTGGCTGGTGTCAAGGGTGAGGAGCCACGGGCCAGTGTGCAACAGATGCCGGTTGTGGTGCCAGCAATGGTGCCGAAGGCACAAGAACCGATACAGGTTCGGCATGTTGATCTTGACATTAACAATAGTTCTAGCAGTGATGAGTACAGTAGCGACGTCGGGAGCTCTGAAGAAGATGATGAGGATTAGTTCCTTGGTAAGCTATTTTATGATTCATGTTTCCATGCCGTTGTAGGTCATGTACTAGTAAGAACAAATAATGCAAGCTCTCATACATGATTATTCAAGATCATGCAGCAATATACTGGTATTGAATAGAATTGGGTGGCGTATCATGTATGTGTTGATTAATTAAACCATCTCACTAGTCAATTTGCTTCGAT                                                                                                                              ]
[+] EMBL AU094844             [          CGCCGCCGCGATGATGCAGTCGCACCACCCCTCGCCGGCGCGGCTGGGGCTGACGGCCTCGTCGCCGTCGCTCCCGCCCAACCCGGCTGCGGGGAATCCCACCTCCTCGCCGCCGCAGGGCAACCCTAGCGCGGCGGCGGCCGTGGGCGCTGCCGCTGCCGCTGCACCAACCCTAACTACATCGCCGTCGCTGCTGNCGCTCCTGCCGCCGCTCCCGCGGGCGCAGGCGCTCTTCn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL AU063940             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCGCCTTCGCCAAGAAGCTCCGCGAGGCGCACCACGTGCTCGACCGCCTCGTCGACGACTACGCNGACTACCGCCGCGACCCCAAGCGCCCGCGCGGCGCCGCGGCGGCGGAACGACCCCGAGCCGGTGTCAGACGGCGACTTTGGCGCGTCGCTGCACTCCAAGCTCAACCTGGACGACGTCCTGACGTACGCCCACCGCATAAGCTACACGACCTTCGCGCCGCCTGAGCATGGTGCTGGGCTGCCTCTGCGTGGGGCGTTGCCGCCTTGCTCCTCAGGAAAATGAGATGAGGATGTCGCAGCTGTATCAATTTGCGGATTTGGATGTTGGAGTGCCGAAATCCCAGGAAGCAAAGGAGAGGACTGCAGCAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL AU063939             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   TCGCCTTCGCCAAGAAGCTCCGCGAGGCGCACCACGTNCTCGACCGCCTCGTCGACGACTACGCCGACTACCGCCGCGACCCCAAGCGCCCGCGCGGCGCCGCGGCGGCGGAACGACCCCGAGCCGGTGTCAGACGGCGACTTTGGCGCGTCGCTGCACTCCAAGCTCAACCTGGACGACGTCCTGACGTACGCCCACCGCATAAGCTACACGACCTTCGCGCCGCCTGAGCATGGTGCTGGGCTGCCTCTGCGTGGGGCGTTGCCGCC TGCTCCTCAGGAAAATGAGATGAGGATGTCGCAACTGTATCAATTTGCGGATTTGGATGTTGGAGTGCCGAAATCCCAGGAAGCAAAG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                ]
[+] EMBL AU094843             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              CGCATCCCGCATCGGGTNTCGGAACGGGCCNCTGCNTNTCGAAAATCCCCGTTGCCNCCGCCTGGATGGAAACCCCGGGGACCCCGATCACTCTCCCGCCGGNTGGCATTCTGGCTGNTGTCAAGGGTGAGGAGCCACGGNCCAGTGTGCAACAGATGCCGGTTNTGGTGCCAGCAATGNTNCCGAAGGCACNAGAACCGATACAGGTTCGGCATGTTNATCTTNACNTTCACAATAGTTCTTGCAGTGNTGAGTNCAGTAGCGACGTCGGNAGCTCTGAAGANGATGATGAGGATTAGTTCCTTGGTAAGCCNTTTTNTGATTCATGNTTCCATGCCGTTGTAGNTCATGTACTAGTAAGAACAAATAATGCAAGCTCTCATACNTGATTATTCAAGATCATGCAGCAATATACTGGTATTGAATAGAATTGGGTGGCGTANCATGTATGTGTTGATTAATTAAACCATCTCACTAGTCAATTTGCTTCGATATATGTAATCAAGCATGATGGTCTAATTTCCTCAGGATGTGCTGGTGTTGTATCGTCAGAAACATGGCTTCTTTTATGGATATTTAAACTTGAACATGGTGTGTTTAATGTTTGAAAAAAAAAAAA]
[+] EMBL AU085886             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CAAGANCCGATACAGGTTCGGCATGTTGATCTTGACATTAACAATAGTTCTAGCAGTGATGAGTACAGTAGCGACGTCGGGAGCTCTGAAGAAGATGATGAGGATTAGTNCCTTGGTAAGCTATTTTATGATTCATGTTTCCATGCCGTTGTAGGTCATGTACTAGTAAGAACAAATAATGCAAGCTCTCATACATGATTATTCAAGATCATGCAGCAATATACTGGTATTGAATAGAATTGGGTGGCGTATCATGTATGTGNTGATTAATTAAACCATCTCACTAGTCAATTTGCTTCGATATATGTAATCAAGCATGATGGTCTAATTTCCTCAGGATGTGCTGGTGTTGTATCGTCAGAAACATGGCTTCTTTTATGGATATTTAAACTTGAAaaa                             ]




>consensus_9040#0
TCGCCGCCGCCGCCGCCGCGATGATGCAGTCGCACCACCCCTCGCCGGCGCGGCTGGGGC
TGACGGCCTCGTCGCCGTCGCTCCCGCCCAACCCGGCTGCGGGGAATCCCACCTCCTCGC
CGCCGCAGGGCAACCCTAGCGCGGCGGCGGCCGTGGGCGCTGCCGCTGCCGCTGCACCAA
CCCTAACTACATCGCCGTCGCTGCTGCCGCTCCTGCCGCCGCTCCCGCGGGCGCAGGCGC
TCCTCCAGCTGATCTCCGCGCTCGCCTCCAACCTCTTCGAGCTCTCGCCGAGCCGCGCCG
CGTGGATCTCGGCGTACCGGGGGTCACTCCCCACTTTCCTCCCCTCGCCGTCCTCCGCGC
CGCCGCCGCCGCTCCCGGCCCCGATCTCCTCCACCAAGGAGGCGCTGTCGCTGCTCAACA
CGCTCCAGACCCAGCTCTTCGAGGCCGTCGCCGAGCTGCAGGAGACCCTCGACCTGCAGG
ACGCGCGCGCGCGCCTCGCCCGCGAGGCGCGCGCCAAGGACGCCTCGATCCTCGCCTTCG
CCAAGAAGCTCCGCGAGGCGCACCACGTGCTCGACCGCCTCGTCGACGACTACGCCGACT
ACCGCCGCGACCCCAAGCGCCCGCGCGGCGCCGCGGCGGCGGAACGACCCCGAGCCGGTG
TCAGACGGCGACTTTGGCGCGTCGCTGCACTCCAAGCTCAACCTGGACGACGTCCTGACG
TACGCCCACCGCATAAGCTACACGACCTTCGCGCCGCCTGAGCATGGTGCTGGGCTGCCT
CTGCGTGGGGCGTTGCCGCCTGCTCCTCAGGAAAATGAGATGAGGATGTCGCAGCTGTAT
CAATTTGCGGATTTGGATGTTGGAGTGCCGAAATCCCAGGAAGCAAAGGAGAGGACTGCA
GCAGAGGGAGATGCCACTCCGCTTTTTCAGCCTTCACCAACCCAGGAGGCAGCTGTGCTA
CCAATCACTGTGCCGCATCCGCATGGGTGGCGGAACGGGGCGCTGCCTCTCGAAATCCCG
TTGCCGCCGCCTGGATGGAAACCCGGGGACCCGATCACTCTACCGCCGGATGGCATTCTG
GCTGGTGTCAAGGGTGAGGAGCCACGGGCCAGTGTGCAACAGATGCCGGTTGTGGTGCCA
GCAATGGTGCCGAAGGCACAAGAACCGATACAGGTTCGGCATGTTGATCTTGACATTAAC
AATAGTTCTAGCAGTGATGAGTACAGTAGCGACGTCGGGAGCTCTGAAGAAGATGATGAG
GATTAGTTCCTTGGTAAGCTATTTTATGATTCATGTTTCCATGCCGTTGTAGGTCATGTA
CTAGTAAGAACAAATAATGCAAGCTCTCATACATGATTATTCAAGATCATGCAGCAATAT
ACTGGTATTGAATAGAATTGGGTGGCGTATCATGTATGTGTTGATTAATTAAACCATCTC
ACTAGTCAATTTGCTTCGATATATGTAATCAAGCATGATGGTCTAATTTCCTCAGGATGT
GCTGGTGTTGTATCGTCAGAAACATGGCTTCTTTTATGGATATTTAAACTTGAACATGGT
GTGTTTAATGTTTGAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case