|
These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9049#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1175 fasta sequence
[TCGTCCTCCTGCCGCCTCGGGTGTTCTTCCTTCCTCCATCGCCATGGCGGCGGCGGCGGCTTCCCACCGCGTGTTCGTCTACGGGACGCTAATGGCGGAGGAGGTGGTGCGCGTCCTCATCGGCCGCTCGCCGTCCTCCTCCCCGGCCGTCCTCCCAAACCACCAGAGGTTCAGCATCAAGGGGCGCGTTTACCCGGCGATTCTTCCCGTCGACGGCAAGGAGGTCTCAGGGAAGGTTTTCAAGGGCATCACTGACAGGGAGCTCAATGTGCTGGATATATTTGAAGATGAGGAGTATGTCAAGAGAACCGTTGAGATATCACTAACTGACACATCGGAGAAATTGCTTGCTTATGCATACATTTGGGGCAATCAGGATGATCCTGACCTCTATGGTGAATGGGACTTTGAGGAATGGAAAAGGGTGCACTTGGAGGATTATGTCAAGATGACACAAGAGTTCATGGAGGAACTGGAACAGCTCGAACCAAAGACCGAGACCTGAAGCTCAACACTCATTCGTCCAGAAGGATTCACTCAACAATGAATTGTATGTGCATTGTCAAATGGTTCTCCTCTTGTTTGTAAATAAGATGTTTACACCATTAATTGATAGACAACAGTTACAGAATTCGCAG-TGGTTTCAATTTTA-GTGCTTATAAGCTTGAGTACAAATACATATAATTTCTGTGCTTTTGAAT-CAGT-CCAT-ATTTTACATGTG-ATG-ATGTGAAACAA-ACT-ATCTTCAATT-CAGAAATTG-ATTGATTGGCAG-AGAAG-ATG-ACAGG-AT---ACAG-A-AGG-AA-AGGTGC-AGAAT-ATTTG-CTATAGTGGTTTCTAATCTGGGTCTGATCTTAATAGAGGCTTGAACAACCCCAAGAACAGTTAGGGCAAATGTTTTCTCTAAAATACACTATCTT-AA-ATTTCGCCTAAACCC-T-GTCTCAACTCG-TTAA-CAGCTCT-AGGT-AAGTT-CCATTCTTATCTCTAACTTTT-TGCAAATGCAAAAACTACACAATATATCAAAAGAGGAAAAGAAATATTCTGAGGAGCATTTGCCCTCCCAGCTATAAGCTGACACTCTACACTGAATTCGGCGCATAGCCTTTTAGGCCACGGATTTGATGATAGTTATGCTGGGTTTT--GTAGCCATTGCATCTCTTCTGATCCCATTCTGAATTCATAATGGACGCAAA]
[+] EMBL AK121058 [TCGTCCTCCTGCCGCCTCGGGTGTTCTTCCTTCCTCCATCGCCATGGCGGCGGCGGCGGCTTCCCACCGCGTGTTCGTCTACGGGACGCTAATGGCGGAGGAGGTGGTGCGCGTCCTCATCGGCCGCTCGCCGTCCTCCTCCCCGGCCGTCCTCCCAAACCACCAGAGGTTCAGCATCAAGGGGCGCGTTTACCCGGCGATTCTTCCCGTCGACGGCAAGGAGGTCTCAGGGAAGGTTTTCAAGGGCATCACTGACAGGGAGCTCAATGTGCTGGATATATTTGAAGATGAGGAGTATGTCAAGAGAACCGTTGAGATATCACTAACTGACACATCGGAGAAATTGCTTGCTTATGCATACATTTGGGGCAATCAGGATGATCCTGACCTCTATGGTGAATGGGACTTTGAGGAATGGAAAAGGGTGCACTTGGAGGATTATGTCAAGATGACACAAGAGTTCATGGAGGAACTGGAACAGCTCGAACCAAAGACCGAGACCTGAAGCTCAACACTCATTCGTCCAGAAGGATTCACTCAACAATGAATTGTATGTGCATTGTCAAATGGTTCTCCTCTTGTTTGTAAATAAGATGTTTACACCATTAATTGATAGACAACAGTTACAGAATTCGCAG TGGTTTCAATTTTA GTGCTTATAAGCTTGAGTGCAAATACATATAATTTCTGTGCTTTTGAAT CAGT CCAT ATTTTACATG ]
[+] EMBL CA999193 [ TCCTCCCAAACCACCAGAGGTTCAGCATCAAGGGGCGCGTTTACCCGGCGATTCTTCCCGTCGACGGCAAGGAGGTCTCAGGGAAGGTTTTCAAGGGCATCACTGACAGGGAGCTCAATGTGCTGGATATATTTGAAGATGAGGAGTATGTCAAGAGAACCGTTGAGATATCACTAACTGACACATCGGAGAAATTGCTTGCTTATGCATACATTTGGGGCAATCAGGATGATCCTGACCTCTATGGTGAATGGGACTTTGAGGAATGGAAAAGGGTGCACTTGGAGGATTATGTCAAGATGACACAAGAGTTCATGGAGGAACTGGAACAGCTCGAACCAAAGACCGAGACCTGAAGCTCAACACTCATTCGTCCAGAAGGATTCACTCAACAATGAATTGTATGTGCATTGTCAAATGGTTCTCCTCTTGTTTGTAAATAAGATGTTTACACCATTAATTGATAGACAACAGTTACAGAATTCGCAG TGGTTTCAATTTTA ]
[+] EMBL CA998891 [ TCCTCCCAAACCACCAGAGGTTCAGCATCAAGGGGCGCGTTTACCCGGCGATTCTTCCCGTCGACGGCAAGGAGGTCTCAGGGAAGGTTTTCAAGGGCATCACTGACAGGGAGCTCAATGTGCTGGATATATTTGAAGATGAGGAGTATGTCAAGAGAACCGTTGAGATATCACTAACTGACACATCGGAGAAATTGCTTGCTTATGCATACATTTGGGGCAATCAGGATGATCCTGACCTCTATGGTGAATGGGACTTTGAGGAATGGAAAAGGGTGCACTTGGAGGATTATGTCAAGATGACACAAGAGTTCATGGAGGAACTGGAACAGCTCGAACCAAAGACCGAGACCTGAAGCTCAACACTCATTCGTCCAGAAGGATTCACTCAACAATGAATTGTATGTGCATTGTCAAATGGTTCTCCTCTTGTTTGTAAATAAGATGTTTACACCATTAATTGATAGACAACAGTTACAGAATTCGCAG TGGTTTCA ]
[-] EMBL BQ909207 [ ttttTTACAGAATTCGCAGNNGGTTTCAATTGNA GTGCTTATAAGCTTGAGTACAAATACATATAATTTCTGTGCTTTTGAATCCAGTCCCATCATTTTACATGTGCATGCATGTGAAACAACACTCATCTTCAATTCCAGAAATTGCATTGATTGGCAGCAGAAGCATGCACAGGCATCANACAGCACAGGCAACAGGTGCGAGAATCATTTGCCTATAGTGGTTTCTAATCTGGGTCTGATCTTAATAGAGGCTTGAACAACCCCAAGAACAGTTAGGGCAAATGTTTTCTCTAAAATACACTATCTT AA ATTTCGCCTAAACCC T GTCTCAACTCG TTAA CAGCTCT AGGT AAGTT CCATTCTTATCTCTAACTTTTGTGCAAATGCAAAAACTACACAATATATCAAAAGAGGAAAAGAAATATTCTGAGGAGCATTTGCCCTCCCAGCTATAAGCTGACACTCTACACTGAATTCGGCGCATAGCCTTTTAGGCCACGGATTTGATGATAGTTATGCTGGGTTTTGAGTAGCCATTGCATCTCTTCTGATCCCATTCTGAATTCAT ]
[-] EMBL BQ909135 [ ttttTTACAGAATTCGCAG GGGTTTCAATNNGAGGTGCTTATAAGCTTGAGTACAAATACATATAATTTCTGTGCTTTTGAAT CAGT CCAT ATTTTACATGTG ATG ATGTGAAACAA ACT ATCTTCAATT CAGAAATTG ATTGATTGGCAG AGAAG ATG ACAGG AT AAAG A AGG AA AGGTGC AGAAT ATTTG CTATAGTGGTTTCTAATCTGGGTCTGATCTTAATAGAGGCTTGAACAACCCCAAGAACAGTTAGGGCAAATGTTTTCTCTAAAATACACTATCTT AA ATTTCGCCTAAACCC T GTCTCAACTCG TTAA CAGCTCT AGGT AAGTT CCATTCTTATCTCTAACTTTT TGCAAATGCAAAAACTACACAATATATCAAAAGAGGAAAAGAAATATTCTGAGGAGCATTTGCCCTCCCAGCTATAAGCTGACACTCTACACTGAATTCGGCGCATAGCCTTTTAGGCCACGGATTTGATGATAGTTATGCTGGGTTTT GTAGCCATTGCATCTCTTCTGATCCCATTCTGAATTCATAATGGACGCAAA]
[-] EMBL BQ907415 [ GGTTTCTAATCTGGGTCTGATCTTAATAGAGGCTTGAACAACCCCAAGAACAGTTAGGGCAAATGTTTTCTCTAAAATACACTATCTTCAACATTTCGCCTAAACCCGTGGTCTCAACTCGTTTAACCAGCTCTCAGGTCAAGTTCCCATTCTTAT ]
clustalw multiple alignements is not computed in this case |
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||