These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9056#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1487 fasta sequence [CCCGTGCGTCTCCCCTCCGGCTCCGCTTCTCCCCTCGCCGGCGCCGTCGCCGGCGTTCCTCGGCTGCAGATCCAATCCCGCGCCCCGCCGAGTGACTCTCCTGATTCCCTGACGGCCTATTGAAGAGCTGCCTAGACCACCGCCGCTCGCGACTCGCGAGCGCTGGGGCGCCCGCCGGCGGCCGCCACGCCCTTGTTGGCTAGGCTGCTAGCTCTCTGCCCCTCTCGCCTGTCGGCCTCTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGGGCTATGGCGACCCGCGTCCTGTCACAGAACCTGAGAAAGTTGGCTTCGTTCTCACTCCTCAATCTGTCCCAGAGGGCACCAATCTCGCCTTCCCCTGAACCTCTCAGGCCTGCTATTGCTTCATTTGGGAAATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCATGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGAGGAAGAGGGAAAAGAAGAAGAGGAAAGAGGCCAATAAAAATGATCCACGGCGTATCAGACCCAAGGGAAAGAAGATAAAACAGAAATTTCCTACACCTGAAGCTCGACTCAAATACAAGATTGAGAAGGCCAAATTGAAAGAAGCTATGTTGGTTGAGAAGTTAAAGAAGTATGAGATTGCTAAAGCACAAGGCCCTATGGCTAAACAAGATGATCTTGATGGCGAGGAAAGATTTTATTTGAAGAAGGTTTCTCAAAAAAAGTCAAATTATGTCCCTGTTGGAAGGAGAGGAGTCTTTGGT-GGTGTTATTCTAAACATGCATTTGCACTGGAAGAAACATGAGACTGTAAAAGTCATCTGCAAACCCTGCAAGCCAGGGCAAATCCAGGAGTACGCAAGTGAGATAGCCAGACTGAGTGGTGGTATCCCTATTAATACTATTGGAAATGACACCATAGTCTTCTATCGGGGAAAGAACTATGTTCAGCCAGATGTCATGTCACCAGTCGATACACTATCAAAGAAAAAGGCACTTGAAAAATCAAAATATGAACAATCACTGGAGACAGTGAGGCGTTTTATTGCCGTGTCTGAAAAAGAGCTTGAACTTTATTATCGGCATATTGCACTTTATGGAAACCCACAATCCCAGAATGTTGATCCTGTTTATTGTGATGATAGAAGAGCTGCTTCTCTGAAAATGGAAGAACCGAGTCAAGGGAAGGACCTATCGCATATGGATAACGATGGTTTCTCTGATATCACTGATGCTTCGGAGTCTGACGAAGAAGCTAATC] [+] EMBL AK106256 [CCCGTGCGTCTCCCCTCCGGCTCCGCTTCTCCCCTCGCCGGCGCCGTCGCCGGCGTTCCTCGGCTGCAGATCCAATCCCGCGCCCCGCCGAGTGACTCTCCTGATTCCCTGACGGCCTATTGAAGAGCTGCCTAGACCACCGCCGCTCGCGACTCGCGAGCGCTGGGGCGCCCGCCGGCGGCCGCCACGCCCTTGTTGGCTAGGCTGCTAGCTCTCTGCCCCTCTCGCCTGTCGGCCTCTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGGGCTATGGCGACCCGCGTCCTGTCACAGAACCTGAGAAAGTTGGCTTCGTTCTCACTCCTCAATCTGTCCCAGGGGGCACCAATCTCGCCTTCCCCTGAACCTCTCAGGCCTGCTATTGCTTCATTTGGGAAATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCGTGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGAGGAAGAGGGAAAAGAAGAAGAGGAAAGAGGCCAATAAAAATGATCCACGGCGTATCAGACCCAAGGGAAAGAAGATAAAACAGAAATTTCCTACACCTGAAGCTCGACTCAAATACAAGATTGAGAAGGCCAAATTGAAAGAAGCTATGTTGGTTGAGAAGTTAAAGAAGTATGAGATTGCTAAAGCACAAGGCCCTATGGCTAAACAAGATGATCTTGATGGCGAGGAAAGATTTTATTTGAAGAAGGTTTCTCAAAAAAAGTCAAATTATGTCCCTGTTGGAAGGAGAGGAGTCTTTGGT GGTGTTATTCTAAACATGCATTTGCACTGGAAGAAACATGAGACTGTAAAAGTCATCTGCAAACCCTGCAAGCCAGGGCAAATCCAGGAGTACGCAAGTGAGATAGCCAGACTGAGTGGTGGTATCCCTATTAATACTATTGGAAATGACACCATAGTCTTCTATCGGGGAAAGAACTATGTTCAGCCAGATGTCATGTCACCAGTCGATACACTATCAAAGAAAAAGGCACTTGAAAAATCAAAATATGAACAATCACTGGAGACAGTGAGGCGTTTTATTGCCGTGTCTGAAAAAGAGCTTGAACTTTATTATCGGCATATTGCACTTTATGGAAACCCACAATCCCAGAATGTTGATCCTGTTTATTGTGATGATAGAAGAGCTGCTTCTCTGAAAATGGAAGAACCGAGTCAAGGGAAGGACCTATCGCATATGGATAACGATGGTTTCTCTGATATCACTGATGCTTCGGAGTCTGACGAAGAAGCTAATC] [+] EMBL AK066987 [ CCCCTCCGGCTCCGCTTCTCCCCTCGCCGGCGCCGTCGCCGGCGTTCCTCGGCTGCAGATCCAATCCCGCGCCCCGCCGAGTGACTCTCCTGATTCCCTGACGGCCTATTGAAGAGCTGCCTAGACCACCGCCGCTCGCGACTCGCGAGCGCTGGGGCGCCCGCCGGCGGCCGCCACGCCCTTGTTGGCTAGGCTGCTAGCTCTCTGCCCCTCTCGCCTGTCGGCCTCTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGGGCTATGGCGACCCGCGTCCTGTCACAGAACCTGAGAAAGTTGGCTTCGTTCTCACTCCTCAATCTGTCCCAGAGGGCACCAATCTCGCCTTCCCCTGAACCTCTCAGGCCTGCTATTGCTTCATTTGGGAAATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCATGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGAGGAAGAGGGAAAAGAAGAAGAGGAAAGAGGCCAATAAAAATGATCCACGGCGTATCAGACCCAAGGGAAAGAAGATAAAACAGAAATTTCCTACACCTGAAGCTCGACTCAAATACAAGATTGAGAAGGCCAAATTGAAAGAAGCTATGTTGGTTGAGAAGTTAAAGAAGTATGAGATTGCTAAAGCACAAGGCCCTATGGCTAAACAAGATGATCTTGATGGCGAGGAAAGATTTTATTTGAAGAAGGTTTCTCAAAAAAAGTCAAATTATGTCCCTGTTGGAAGGAGAGGAGTCTTTGGT GGTGTTATTCTAAACATGCATTTGCACTGGAAGAAACATGAGACTGTAAAAGTCATCTGCAAACCCTGCAAGCCAGGGCAAATCCAGGAGTACGCAAGTGAGATAGCCAGACTGAGTGGTGGTATCCCTATTAATACTATTGGAAATGACACCATAGTCTTCTATCGGGGAAAGAACTATGTTCAGCCAGATGTCATGTCACCAGTCGATACACTATCAAAGAAAAAGGCACTTGAAAAATCAAAATATGAACAATCACTGGAGACAGTGAGGCGTTTTATTGCCGTGTCTGAAAAAGAGCTTGAACTTTATTATCGGCATATTGCACTTTATGGAAACCCACAATCCCAGAATGTTGATCCTGTTTATTGTGATGATAGAAGAGCTGCTTCTCTGAAAATGGAAGAACCGAGTCAAGGGAAGGACCTATCGCATATGGATAACGATGGTTTCTCTGATATCACTGATGCTTCGGAGTCTGACGAAGAAGCTAATC] [+] EMBL CB672629 [ CCGGCCCCTCTTCTCCCCTCGCCGGCGCCGTCGCCGGCGTTCCTCGGCTGCAGATCCAATCCCGCGCCCCGCCGAGTGACTCTCCTGATTCCCTGACGGCCTATTGAAGAGCTGCCTAGACCACCGCCGCTCGCGACTCGCGAGCGCTGGGGCGCCCGCCGGCGGCCGCCACGCCCTTGTTGGCTAGGCTGCTAGCTCTCTGCCCCTCTCGCCTGTCGGCCTCTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGGGCTATGGCGACCCGCGTCCTGTCACAGAACCTGAGAAAGTTGGCTTCGTTCTCACTCCTCAATCTGTCCCAGAGGGCACCAATCTCGCCTTCCCCTGAACCTCTCAGGCCTGCTATTGCTTCATTTGGGAAATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCATGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGA ] [+] EMBL AK121241 [ CCTCGCCGGCGCCGTCGCCGGCGTTCCTCGGCTGCAGATCCAATCCCGCGCCCCGCCGAGTGACTCTCCTGATTCCCTGACGGCCTATTGAAGAGCTGCCTAGACCACCGCCGCTCGCGACTCGCGAGCGCTGGGGCGCCCGCCGGCGGCCGCCACGCCCTTGTTGGCTAGGCTGCTAGCTCTCTGCCCCTCTCGCCTGTCGGCCTCTACTCCGGCTAACCAGAGCTCCTCCTCCCTTGCTCCCTTGGCTACACGGGATTTGCGGTCTTAGAAAATTTCGGTATATGAAGTTAGGCACACTCAACAAAATATTCCTGACTACACCACTTTTCAATGCGTTGGCATAGGACTAGTGGGCTATGGCGACCCGCGTCCTGTCACAGAACCTGAGAAAGTTGGCTTCGTTCTCACTCCTCAATCTGTCCCAGAGGGCACCAATCTCGCCTTCCCCTGAACCTCTCAGGCCTGCTATTGCTTCATTTGGGAAATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCATGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGAGGAAGAGGGAAAAGAAGAAGAGGAAAGAGGCCAATAAAAATGATCCACGGCGTATCAGACCCAAGGGAAAGAAGATAAAACAGAAATTTCCTACACCTGAAGCTCGACTCAAATACAAGATTGAGAAGGCCAAATTGAAAGAAGCTATGTTGGTTGAGAAGTTAAAGAAGTATGAGATTGCTAAAGCACAAGGCCCTATGGCTAAACAAGATGATCTTGATGGCGAGGAAAGATTTTATTTGAAGAAGGTTTCTCAAAAAAAGTCAAATTATGTCCCTGTTGGAAGGAGAGGAGTCTTTGGT GGTGTTATTCTAAACATGCATTTGCACTGGAAGAAACATGAGACTGTAAAAGTCATCTGCAAACCCTGCAAGCCAGGGCAAATCCAGGAGTACGCAAGTGAGATAGCCAGACTGAGTGGTGGTATCCCTATTAATACTATTGGAAATGACACCATAGTCTTCTATCGGGGAAAGAACTATGTTCAGCCAGATGTCATGTCACCAGTCGATACACTATCAAAGAAAAAGGCACTTGAAAAATCAAAATATGAACAATCACTGGAGACAGTGAGGCGTTTTATTGCCGTGTCTGAAAAAGAGCTTGAACTTTATTATCGGCATATTGCACTTTATGGAAACCCACAATCCCAGAATGTTGATCCTGTTTATTGTGATGATAGAAGAGCTGCTTCTCTGAAAATGGAAGAACCGAGTCAAGGGAAGGACCTATCGCATATGGATAACGATGGTTTCTCTGATATCACTGATGCTTCGGAGTCTGACGAAGAAGCTAATC] [+] EMBL CF322947 [ AATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCATGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGAGGAAGAGGGAAAAGAAGAAGAGGAAAGAGGCCAATAAAAATGATCCACGGCGTATCAGACCCAAGGGAAAGAAGATAAAACAGAAATTTCCTACACCTGAAGCTCGACTCAAATACAAGATTGAGAAGGCCAAATTGAAAGAAGCTATGTTGGTTGAGAAGTTAAAGAAGTATGAGATTGCTAAAGCACAAGGCCCTATGGCTAAACAAGATGATCTTGATGGCGAGGAAAGATTTTATTTGAAGAAGGTTTCTCAAAAAAAGTCAAATTATGTCCCTGTTGGAAGGAGAGGAGTCTTTGGTGGGTGTTATTCTAAACATGCATTTGCACTGGAAGAAACATGAGACTGTAAAAGTCATCTGCAAACCCTGCAAGC ] [+] EMBL CF323777 [ AATGCTTAAATCCCTTTTATCAGTTTAGTCCTCCATGGATGGTTAGATGGGCTAGCCATAGCTCAGTCAATCTAGTTCTATCTGATGATGGGAAACCCAAGTTTGAGATTGAGGAGGTGGAACCTTCCAAGAAGCGGGGGTATTTGACAAAGAAGCGATTGAAGCTTCAGAGGAAGAGGGAAAAGAAGAAGAGGAAAGAGGCCAATAAAAATGATCCACGGCGTATCAGACCCAAGGGAAAGAAGATAAAACAGAAATTTCCTACACCTGA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||