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These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9065#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 3 consensus length = 3383 fasta sequence
[ATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCATAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGTAAGTATTTTGTAATCCACACTTTCAGGCATAACCTATTTCTAAACTCTCATCATCATAACTGGATGACCTGTTCCTCTCTCTTATTAAAAACTTGCAGTTTGTGGCCTAGTCAACTATTTGATGTTGGCCAAAATGTAGACGTGGCAGGACTTTCATTTTAATTGGAAGTCCTGAGGACTAAGATGAAAGAACAAAAATCTGAAGTAAATGCTAAGAATTTACAATGTTAAAAAAAAAACTGAACTACCAAATCGCATTTTGGCAGGAACAAACCATTTAGAAATGTTCAGCGAATTCATTTTGTATAGCTTTTGAAGTTCTCTTGAACAATTAGTCCTTTGAGAAAAGAAAGTTATGGAATGATGCCATTGGAATGTTCACCAAGAAAGAGAAATAAAACATGATTTTCTACATGGAATGGACCATTGTTATAATAAGTGGTAATTTCACCATCCTACAGGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTATCTACCAATCACTGTGCTACGGAAATCAAACATGTAAGTATGTATCCTCTCGCATAACATGCAGTTATCCCATGAATCTAGTTATGGCACTTCATTGTACACTAGATCCTATTTACATATTTTTTACTAGAATAAACCTATATTGCTCCCACCAGCAAGGTTAGTGACATTTTGGGATGACTGCAATTACATTGAAAAAAAAGGTTTATGTAAGTTTTTCTTGAAAAATGTGTTCATGATATATTTATATTCCGTAAACATGTTACAGTAGAAATTAATGGCCAAACCCAAACTTACATGTCAATTTCCAAAATGTCAATTATCTGTGACTGGACATCAAAGTGACTTAATGTTTGAATGAAATAGCTATTTTCAATATAGTTTCTGTCTATGAACATTTTGACTGAATATCTCCAGTATGTCGTCATTATGCGCAAAGGGGTTGAATTCTAGGTGTTGATATGGATTGTTTTTATCTGTTTTGTTTGACTACATATCACAGTTGAATAATATATCTGGTTTGCATGTCATTCTTTTCTAGCACCATGACAGATTAGTTTAGTTGAAATATGAAGGGGTAGATAAGTACTTCTATCCTTTCTGGCGCAATAAAAGCTTATTTTCCTCAATTAGAGGAAGTCCAAATAGGCATATATTTAATGTGTGTCCGTTCCTACTCATTTTATTGGCATTTCCTTTAAATAGGTTCAGTGAAGCTGCAGAGTGAAGGTTATAGTGAAGACTGGCCTGCTATATGTGCATTGCACAAGACAATCTGCAGTCTTTTTGTCCTCTTGATTTGAATATAAAGGTTCTAATTCTACTAAAAATGAATATAATACAAGCATTCAATAAACTGTTTAGGACTTGCACATGTCTCATCATTTAGATTGTGATAAAATAAAAAAAAATATTTGAACATTTCTGTTTGAGAGGGGAGGATGTTAATACAAATTTCTAGTCTTCTGTTTTTACCTGGAAGGCTTCATAGCCACAGCTTCTATTCCAAAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAGCCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTTGTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAATGCACCCTTAACACATTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATAGTTCTTTTTTTCTTCATATGTGTGTTAGGGTTG-GGGTGTGGCAGAGGGGGTATTA-GAAGGCCAAACCTCTGTGGTACACGTCTATAGATTCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAGCCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCAGAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGAC]
[+] EMBL AK121386 [ATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCATAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGTAAGTATTTTGTAATCCACACTTTCAGGCATAACCTATTTCTAAACTCTCATCATCATAACTGGATGACCTGTTCCTCTCTCTTATTAAAAACTTGCAGTTTGTGGCCTAGTCAACTATTTGATGTTGGCCAAAATGTAGACGTGGCAGGACTTTCATTTTAATTGGAAGTCCTGAGGACTAAGATGAAAGAACAAAAATCTGAAGTAAATGCTAAGAATTTACAATGTTAAAAAAAAAACTGAACTACCAAATCGCATTTTGGCAGGAACAAACCATTTAGAAATGTTCAGCGAATTCATTTTGTATAGCTTTTGAAGTTCTCTTGAACAATTAGTCCTTTGAGAAAAGAAAGTTATGGAATGATGCCATTGGAATGTTCACCAAGAAAGAGAAATAAAACATGATTTTCTACATGGAATGGACCATTGTTATAATAAGTGGTAATTTCACCATCCTACAGGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTATCTACCAATCACTGTGCTACGGAAATCAAACATGTAAGTATGTATCCTCTCGCATAACATGCAGTTATCCCATGAATCTAGTTATGGCACTTCATTGTACACTAGATCCTATTTACATATTTTTTACTAGAATAAACCTATATTGCTCCCACCAGCAAGGTTAGTGACATTTTGGGATGACTGCAATTACATTGAAAAAAAAGGTTTATGTAAGTTTTTCTTGAAAAATGTGTTCATGATATATTTATATTCCGTAAACATGTTACAGTAGAAATTAATGGCCAAACCCAAACTTACATGTCAATTTCCAAAATGTCAATTATCTGTGACTGGACATCAAAGTGACTTAATGTTTGAATGAAATAGCTATTTTCAATATAGTTTCTGTCTATGAACATTTTGACTGAATATCTCCAGTATGTCGTCATTATGCGCAAAGGGGTTGAATTCTAGGTGTTGATATGGATTGTTTTTATCTGTTTTGTTTGACTACATATCACAGTTGAATAATATATCTGGTTTGCATGTCATTCTTTTCTAGCACCATGACAGATTAGTTTAGTTGAAATATGAAGGGGTAGATAAGTACTTCTATCCTTTCTGGCGCAATAAAAGCTTATTTTCCTCAATTAGAGGAAGTCCAAATAGGCATATATTTAATGTGTGTCCGTTCCTACTCATTTTATTGGCATTTCCTTTAAATAGGTTCAGTGAAGCTGCAGAGTGAAGGTTATAGTGAAGACTGGCCTGCTATATGTGCATTGCACAAGACAATCTGCAGTCTTTTTGTCCTCTTGATTTGAATATAAAGGTTCTAATTCTACTAAAAATGAATATAATACAAGCATTCAATAAACTGTTTAGGACTTGCACATGTCTCATCATTTAGATTGTGATAAAATAAAAAAAAATATTTGAACATTTCTGTTTGAGAGGGGAGGATGTTAATACAAATTTCTAGTCTTCTGTTTTTACCTGGAAGGCTTCATAGCCACAGCTTCTATTCCAAAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAGCCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTTGTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAATGCACCCTTAACACATTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATAGTTCTTTTTTTCTTCATATGTGTGTTAGGGTTG GGGTGTGGCAGAGGGGGTATTA GAAGGCCAAACCTCTGTGGTACACGTCTATAGATTCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAGCCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATA ]
[+] EMBL CF331250 [ GCTTCTATTCC AAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAGCCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTTGTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAATGCACCCTTAACACTTTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATATTTCTTTTTTTCTTCATATGTGTG TAGGGTTGNGGGTGTGGCANAGGGGGTATTANNAAGGCCAAACCTCTGTGGTACACGTCTATAGATTCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAAC ]
[-] EMBL CF331251 [ GAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAGCCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTGTACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCAGAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGAC]
consensusID : consensus_9065#1 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 2 consensus length = 839 fasta sequence
[TTAGAAGGCCAAACCTCTGTGGTACACGTCTATAGATCCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAG-CCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCTGAGATCTAAAGTTCACAT]
[-] EMBL CB618149 [TTAGAAGGCCAAACCTCTGTGGTACACGTCTATAGATCCCAAATAAATGATACAGTACCTCTTTGGTACTCCCATCAACATGGTTCACACCACACCACTACACCAGTGACACCACCACCACCATTACAGGGTATTTTTCTTGGCCCCTCTGTATAAATAGCAGCACCATGTTCACTCTTTGTTCCATTGAAATACAAGCAACCATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAGGAGGTACCACAACTTTCAGTGAATGTGACATTGACATCTCGAAAGCCGAAAGCAG CCTGAGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCATCTGACGATGCTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCTGAGATCTAAAGTTCACAT]
[+] EMBL CB096278 [ CATAAACAGTAGCCATTTCTAGGACCTTGGCCTTTCTTGAAGGAGGATGAGTTCATCCTGGACAACAAAGCAGAATAAGGTGTTTGAGAGGGCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTTGGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTGGATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGCAGCAGCAGCAGCAGCAGCAGCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGAAGGAGGTACCACAACTTTCAGTGAATGTGACGTTGACATCTCGAAAGCCGAAAGCAGCCCTGAGTTCCAGCAGGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTTCGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGAACTGGCCCTAATAGACCAGTAGTTAGTAACTTAGTTTCAATTGAGCTATGACTGGTTTGCTGAATTATACTGTTGTATTCCGTCTGACGATGCTGTATATGTAATATCTGATGGAAAGGTTATAATCTT ]
consensusID : consensus_9065#2 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 1 consensus length = 822 fasta sequence
[TACTTCGTCGCCTCCTCCTCTCACAGTGGCTTTATCGCATCTTATGATTCTTATCCAGGCAATCAGGCATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCGTAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTAT]
[+] EMBL CB618148 [TACTTCGTCGCCTCCTCCTCTCACAGTGGCTTTATCGCATCTTATGATTCTTATCCAGGCAATCAGGCATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCTGGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTACTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATCCAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTTGTTTTCAAGTACCAAATCCGTAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCTTCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTCATAGTACCCTGAACTAT]
consensus multiple alignement with clustalw CLUSTAL W (1.82) multiple sequence alignment
consensus_9065#0 ATCATTCTTTAGCTCCTATGCCACAGATCAATTATCAGGTACCTTTTCCAGTTTCCTGCT 60
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GGGTTCCCTACTTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCTA 120
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCACATAATTACATGCTTA 180
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CTTGCAGAGGTAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGAGTGC 240
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATTATTT 300
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAACGTGATCAGGAAATC 360
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CAATACCCTTGGCTGGTAAGTTTGAGTTATAAATATTCAAATAAATATTTGAGTCCTTTT 420
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GTTTTCAAGTACCAAATCCATAGAATAGATTATTGCCAAGAGAGCACCCTGGTACTTGAC 480
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TGTAGAGATTTGTATCCCATGTAATACAAGAATCTTGGCCACTTGCATGGTGGGGGTTCT 540
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TCCCCATCGTCCACACCTTAGGATGTTGACGATTTGAATTATCACGTGGGAGATTCGCAT 600
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 ATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACTGATGTAAAGGAGCCAGTAAGTATTT 660
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TGTAATCCACACTTTCAGGCATAACCTATTTCTAAACTCTCATCATCATAACTGGATGAC 720
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CTGTTCCTCTCTCTTATTAAAAACTTGCAGTTTGTGGCCTAGTCAACTATTTGATGTTGG 780
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CCAAAATGTAGACGTGGCAGGACTTTCATTTTAATTGGAAGTCCTGAGGACTAAGATGAA 840
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 AGAACAAAAATCTGAAGTAAATGCTAAGAATTTACAATGTTAAAAAAAAAACTGAACTAC 900
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CAAATCGCATTTTGGCAGGAACAAACCATTTAGAAATGTTCAGCGAATTCATTTTGTATA 960
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GCTTTTGAAGTTCTCTTGAACAATTAGTCCTTTGAGAAAAGAAAGTTATGGAATGATGCC 1020
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 ATTGGAATGTTCACCAAGAAAGAGAAATAAAACATGATTTTCTACATGGAATGGACCATT 1080
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GTTATAATAAGTGGTAATTTCACCATCCTACAGGGTTACCAGAAAAGAAATTCCTTAGAC 1140
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TGTTTGGATCATGCTTGGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGGAGGTTC 1200
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 ATAGTACCCTGAACTATCTACCAATCACTGTGCTACGGAAATCAAACATGTAAGTATGTA 1260
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TCCTCTCGCATAACATGCAGTTATCCCATGAATCTAGTTATGGCACTTCATTGTACACTA 1320
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GATCCTATTTACATATTTTTTACTAGAATAAACCTATATTGCTCCCACCAGCAAGGTTAG 1380
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TGACATTTTGGGATGACTGCAATTACATTGAAAAAAAAGGTTTATGTAAGTTTTTCTTGA 1440
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 AAAATGTGTTCATGATATATTTATATTCCGTAAACATGTTACAGTAGAAATTAATGGCCA 1500
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 AACCCAAACTTACATGTCAATTTCCAAAATGTCAATTATCTGTGACTGGACATCAAAGTG 1560
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 ACTTAATGTTTGAATGAAATAGCTATTTTCAATATAGTTTCTGTCTATGAACATTTTGAC 1620
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TGAATATCTCCAGTATGTCGTCATTATGCGCAAAGGGGTTGAATTCTAGGTGTTGATATG 1680
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GATTGTTTTTATCTGTTTTGTTTGACTACATATCACAGTTGAATAATATATCTGGTTTGC 1740
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 ATGTCATTCTTTTCTAGCACCATGACAGATTAGTTTAGTTGAAATATGAAGGGGTAGATA 1800
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 AGTACTTCTATCCTTTCTGGCGCAATAAAAGCTTATTTTCCTCAATTAGAGGAAGTCCAA 1860
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 ATAGGCATATATTTAATGTGTGTCCGTTCCTACTCATTTTATTGGCATTTCCTTTAAATA 1920
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GGTTCAGTGAAGCTGCAGAGTGAAGGTTATAGTGAAGACTGGCCTGCTATATGTGCATTG 1980
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CACAAGACAATCTGCAGTCTTTTTGTCCTCTTGATTTGAATATAAAGGTTCTAATTCTAC 2040
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TAAAAATGAATATAATACAAGCATTCAATAAACTGTTTAGGACTTGCACATGTCTCATCA 2100
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TTTAGATTGTGATAAAATAAAAAAAAATATTTGAACATTTCTGTTTGAGAGGGGAGGATG 2160
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TTAATACAAATTTCTAGTCTTCTGTTTTTACCTGGAAGGCTTCATAGCCACAGCTTCTAT 2220
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TCCAAAAACTATTTGCTTGTCGTAATCACTGAATTGATACACATTTCATGGTTTCTACAG 2280
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 CCATTCAGTTGACTTGAATCAGTACCAGAAATCACCTTTACTTGAAACATTCTACAAGTT 2340
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 GTTAGTGCCAATACCTTCACATAGTGATAACATATTACCTAGCATATGTTAACCATCAAA 2400
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TGCACCCTTAACACATTGTCCCAAACAGGGATCAAAGGATAAATGATCTCTCTAAATAGT 2460
consensus_9065#1 ------------------------------------------------------------
consensus_9065#2 ------------------------------------------------------------
consensus_9065#0 TCTTTTTTTCTTCATATGTGTGTTAGGGTTGGGGTGTGGCAGAGGGGGTATTAGAAGGCC 2520
consensus_9065#1 --------------------------------------------------TTAGAAGGCC 10
consensus_9065#2 -----------------------------------------------TACTTCGTCGCCT 13
** * * *
consensus_9065#0 AAACCTCT----GTGGTA----CACGTCT-ATAGATTCCAAATAAATGATACAGTACCTC 2571
consensus_9065#1 AAACCTCT----GTGGTA----CACGTCT-ATAGATCCCAAATAAATGATACAGTACCTC 61
consensus_9065#2 CCTCCTCTCACAGTGGCTTTATCGCATCTTATGATTCTTATCCAGGCAATCAGGCATCAT 73
***** **** * * *** ** * * * ** * * *
consensus_9065#0 TTTGGTACTCCCATCAACATGGTTCA--CACCACACCACTACACCAGTGACACCACCACC 2629
consensus_9065#1 TTTGGTACTCCCATCAACATGGTTCA--CACCACACCACTACACCAGTGACACCACCACC 119
consensus_9065#2 TCTTTAGCTCCTAT-GCCACAGATCAATTATCAGGTACCTTTTCCAGTTTC-CTGCTGGG 131
* * **** ** ** * *** * ** ** ***** * * *
consensus_9065#0 ACCATTACAGGGTATTTTTCTTG-GCCCCTCTGTATAAATAGCAGCACCATGTTCACTCT 2688
consensus_9065#1 ACCATTACAGGGTATTTTTCTTG-GCCCCTCTGTATAAATAGCAGCACCATGTTCACTCT 178
consensus_9065#2 TTCCCTAC----TTTTCATCAAGTGCACATCTATGTTGGGAATCCAATCTTTGATGTGCT 187
* *** * ** ** * ** * *** * * * * * * **
consensus_9065#0 TTGTTCCATTGAAATACAAGC---AACCATAAACAGTAGCCATTTCTAGGACCTTGGCCT 2745
consensus_9065#1 TTGTTCCATTGAAATACAAGC---AACCATAAACAGTAGCCATTTCTAGGACCTTGGCCT 235
consensus_9065#2 ATATTAGTATATGGTGTGGATCCTGTTCTTATGATGTCACCGTCAC-ATAATTACATGCT 246
* ** * * * ** ** ** * * * * **
consensus_9065#0 TTCTTGAAGGAGGATGAGTTCATCCTGGA-CAACAAAGCAGAATAAGGTGTT-TGAGAGG 2803
consensus_9065#1 TTCTTGAAGGAGGATGAGTTCATCCTGGA-CAACAAAGCAGAATAAGGTGTT-TGAGAGG 293
consensus_9065#2 TACTTGCAGAGG--TAAATACATGATTAATCAGAAAAATATCAGAAGTTTTTCTTTGGGA 304
* **** ** * * * * *** * * ** *** * * *** * ** * * *
consensus_9065#0 GCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTT 2863
consensus_9065#1 GCGCTGGCAATATATGACAGGGATACGCCAGATCGCTGGCAGAATGTGGCACGGGCAGTT 353
consensus_9065#2 GTGCTAGGAGTTTGGTTCATTTGATCATAAATTTTCTTAGCTTGTTTCATCTTTCATATT 364
* *** * * * * ** * * * ** * * **
consensus_9065#0 GGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTG 2923
consensus_9065#1 GGTGGTGGAAAGTCAGTTGATGATGTGAAGAGGCACTATGAAAAGCTGATCAAGGACGTG 413
consensus_9065#2 ATTTTTCTCAATGCACCACATATCATGACAGGCTGATATTGTTAGTCAA-CGTGATCAGG 423
* * ** ** ** *** * *** ** * * * * *
consensus_9065#0 GATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGC 2983
consensus_9065#1 GATCGCATTGACTCTACAGGAGGCCATCAAGGATCCCATTACAACAGCTCCAATGCTAGC 473
consensus_9065#2 AAATCCAATACCCTT------GGCTGGTAAGT-TTGAGTTATAAATATTCAAATAAATAT 476
* ** * * * *** *** * *** ** ** ***
consensus_9065#0 AGCAGCAGCAGCAGCAGCA-GCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAG 3042
consensus_9065#1 AGCAGCAGCAGCAGCAGCA-GCAGCAACTCTCGGGGCAGTGCCAATGAGGACCAGAGGAG 532
consensus_9065#2 TTGAGTCCTTTTGTTTTCAAGTACCAAATCC----GTAGAATAGATTATTGCCAAGAGAG 532
** ** * * *** ** * ** ** * *** ***
consensus_9065#0 GAGGTACCACAACTTTCAGTGAATGT-GACATTGACATCTCGAAAGCCGAAAGCAGCCTG 3101
consensus_9065#1 GAGGTACCACAACTTTCAGTGAATGT-GACATTGACATCTCGAAAGCCGAAAGCAGCCTG 591
consensus_9065#2 ----CACCCTGGTACT---TGACTGTAGAGATTTGTATCCCATGTAATACAAGAATCTTG 585
*** * *** *** ** *** *** * *** * * **
consensus_9065#0 AGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTT 3161
consensus_9065#1 AGTTCCAGCAAGACCGACACATATGATCGACTGTCCCTGCAGATGCTACCTTCACTATTT 651
consensus_9065#2 GCCACTTGCATGGTGGGGGT-TCTTCCCCATCGTCCACACCT-TAGGATGTTGACGATTT 643
* *** * * * * * * **** * * * ** ** ****
consensus_9065#0 CGTTTATGTTTTCTATTATGCGCGTGTGTGAATCAGA-----ACTGGCCCTAATA-GACC 3215
consensus_9065#1 CGTTTATGCTTTCTATTATGCGCGTGTGTGAATCAGA-----ACTGGCCCTAATA-GACC 705
consensus_9065#2 GAATTATCACGTGGGAGATTCGCATATGTGCAGGTGACTTTTGTTTTTGCTGATGCGACT 703
**** * ** *** * **** * ** * ** ** ***
consensus_9065#0 AGTAGTTAGTAACTTAGTT-TCAATTGAGCTATGACT--GGTTTGCTGAATTATACTGTT 3272
consensus_9065#1 AGTAGTTAGTAACTTAGTT-TCAATTGAGCTATGACT--GGTTTGCTGAATTATACTGTT 762
consensus_9065#2 GATGTAAAGGAGCCAGGTTACCAGAAAAGAAATTCCTTAGACTGTTTGGATCATGC--TT 761
* ** * * *** ** ** ** ** * * ** ** ** * **
consensus_9065#0 GTATTCCATCTGACGATG-CTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCA 3331
consensus_9065#1 GTATTCCATCTGACGATG-CTGTATATGTAATATCTGATGGAAAGTTTATAATCTTCTCT 821
consensus_9065#2 GGATCAGATCTGTCATTTTCTTTTTATAGAAAATCTGG----AGGTTCATAGT--ACCCT 815
* ** ***** * * ** * *** ** ***** * *** *** * * *
consensus_9065#0 GAAAAAAAAAAAAAAAAAACAATGTCATGCCGTTACGTAGCGTATCGTTGAC 3383
consensus_9065#1 GAGATCTAAAGTTCACAT---------------------------------- 839
consensus_9065#2 GAACTAT--------------------------------------------- 822
**
|
| Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||