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Oryza sativa
cluster # 9080 cluster # 9080       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9080#0 length = 1270 sequences # 3  
consensus_9080#1 length = 1093 sequences # 1  
consensus_9080#2 length = 411 sequences # 1  
consensus_9080#3 length = 375 sequences # 1  

consensusID : consensus_9080#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1270
fasta sequence
                              [TGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCTCCATCAACATGGACAAAAATACAGCACCAGTATAGTTCATGAAAGGTCTGTTTGCTCTCACACAAAACTATAAACAGATCCGGGATTACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCCAGGATTTTCTTGATACAAATGCTCTCGAAGCTCTACATGAAAAGCATCACAAGTGATCCATAAGCATATATTACACAGGCATATGCTAAAAGAATATCTACGTTTTCATGCACTATGTCATATGGGAAGCCTATGTTTACAATGTACATTAGTTTCAGTACGGGCAAGCCAAGAATATTGTGCAAGTACACTCCGGTTTCATGAAATTAATGGACCAAAATATTTTTTTTAGTTGCGCCAATAAATAAATGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTGTCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCTCTTGCTGTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGACTCGACCGGCTCCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGATGCGTCGATCGAGGAGGTGGAGGTG]

[+] EMBL CA305873             [TGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCTCCATCAACATGGACAAAAATACAGCACCAGTATAGTTCATGAAAGGTCTGTTTGCTCTCACACAAAACTATAAACAGATCCGGGATTACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCCAGGATTTTCTTGATACAAATGCTCTCGAAGCTCTACATGAAAAGCATCACAAGTGATCCATAAGCATATATTACACAGGCATATGCTAAAAGAATATCTACGTTTTCATGCACTATGTCATATGGGAAGCCTATGTTTACAATGTACATTAGTTTCAGTACGGGCAAGCCAAGAATATTGTGCAAGTACACTCCAGTTTCATGAAATTAATGGACCAAAATATTATTTTTAGTTGCGCCAATAAATA   GCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGTCGAGCATAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[-] EMBL AK109501             [                                                                                                                                                                                                                                                                          TATCTACTTTTTCATGCACTATGTCATATGGGAAGCCTATGTTTACAATGTACATTAGTTTCAGTACGGGCAAGCCAAGAATATTGTGCAAGTACACTCCGGTTTCATGAAATTAATGGACCAAAATATTTTTTTTAGTTGCGCCAATAAATAAATGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTGTCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCTCTTGCTGTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGACTCGACCGGCTCCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGAT                        ]
[-] EMBL AK121596             [                                                                                                                                                                                                                                                                                                                                                                           TCCGGTTTCATGAAATTAATGGACCAAAATATTTTTTTTAGTTGCGCCAATAAATAAATGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTGTCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCTCTTGCTGTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGACTCGACCGGCTCCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGATGCGTCGATCGAGGAGGTGGAGGTG]


>consensus_9080#0 TGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCTCCATCAACATGGACAAAAATA CAGCACCAGTATAGTTCATGAAAGGTCTGTTTGCTCTCACACAAAACTATAAACAGATCC GGGATTACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCCAGGATTTT CTTGATACAAATGCTCTCGAAGCTCTACATGAAAAGCATCACAAGTGATCCATAAGCATA TATTACACAGGCATATGCTAAAAGAATATCTACGTTTTCATGCACTATGTCATATGGGAA GCCTATGTTTACAATGTACATTAGTTTCAGTACGGGCAAGCCAAGAATATTGTGCAAGTA CACTCCGGTTTCATGAAATTAATGGACCAAAATATTTTTTTTAGTTGCGCCAATAAATAA ATGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATAC TGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAA AATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCT TTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACA TCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAAT ATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCT AGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTG TCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCT CTTGCTGTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCG GGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGAC TCGACCGGCTCCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAG GTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGG GCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCC GCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGATGCGTCGATCGAGGA GGTGGAGGTG



consensusID : consensus_9080#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1093
fasta sequence
                              [ATCATTATGTGCTTATAATTTCAACAAGACATTCACAACATTAACAGTTTAGCTGTTAGATGGAATCGGCAGCATAATATTTACATGGGTATTACTACCGCTGCGTATTTTGCCACAGGTAGACAAATCAAGTGTGCTTGGCGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCTCCATCAACATGGACAAAAATACAGCACCGGTATAGTTCATGAAAGGTCTGTTTGCTATAAACAGATCCGGGATAACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCCAGGATTTTCTTGATACAAATGCTCTCGAAGCTCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTGTCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCTCTTGCTGTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGACTCGACCGGCTCCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGATGCGTCGATCGAGGAGGTGGAGGTGGTGGTGACGGGGA]

[-] EMBL AK071107             [ATCATTATGTGCTTATAATTTCAACAAGACATTCACAACATTAACAGTTTAGCTGTTAGATGGAATCGGCAGCATAATATTTACATGGGTATTACTACCGCTGCGTATTTTGCCACAGGTAGACAAATCAAGTGTGCTTGGCGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCTCCATCAACATGGACAAAAATACAGCACCGGTATAGTTCATGAAAGGTCTGTTTGCTATAAACAGATCCGGGATAACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCCAGGATTTTCTTGATACAAATGCTCTCGAAGCTCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTGTCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCTCTTGCTGTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGACTCGACCGGCTCCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGATGCGTCGATCGAGGAGGTGGAGGTGGTGGTGACGGGGA]


>consensus_9080#1 ATCATTATGTGCTTATAATTTCAACAAGACATTCACAACATTAACAGTTTAGCTGTTAGA TGGAATCGGCAGCATAATATTTACATGGGTATTACTACCGCTGCGTATTTTGCCACAGGT AGACAAATCAAGTGTGCTTGGCGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCT CCATCAACATGGACAAAAATACAGCACCGGTATAGTTCATGAAAGGTCTGTTTGCTATAA ACAGATCCGGGATAACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCC AGGATTTTCTTGATACAAATGCTCTCGAAGCTCTATCACATCAAGTAGAAAATGACCGCT TGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCTTTGATCTTCT GTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCA TTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCAC TTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCTAGATCATCAG GATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTGTCCTGTGCTT TACCCAAAGTCCAAGGAAGACCTGCAGACTTAGCCGCAGACTGAAGTTCTCTTGCTGTCA TGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCGGATGCTTCGGGGACGTCGC GCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTGCAGCGACTCGACCGGCT CCGGCACCTCGATGGCGGCGCCGGCCACGCCCGCGTGGAGGAACGACGAGGTGGGCTTCA GGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGGCGTGGGCGACGAAGT TGCGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTGCGCCGCCGCCGCCA TGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGGATGCGTCGATCGAGGAGGTGGAGGTG GTGGTGACGGGGA



consensusID : consensus_9080#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 411
fasta sequence
                              [TTTTTTTTTTTTTGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACATTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGC]

[+] EMBL CF312528             [TTTTTTTTTTTTTGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCATGAGGCCGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACATTTAGCCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGC]


>consensus_9080#2 TTTTTTTTTTTTTGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCA TAACAATATACTGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCAC ATCAAGTAGAAAATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCATGAGGCCGGT TATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGT CAGTATAACATCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGG TATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACATTTAG CCAGAGCTCTAGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGC



consensusID : consensus_9080#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 375
fasta sequence
                              [ANANNTTACCAAACAANGNCAAAACCTTCAGACTTANCCGCAGACTAAAGTNCTCTTGCTTGTCATGTCCAAAGAAAGTGCATAACCTCCTACGTAGTCCATNNNGGATACTTCGGGGACGGTCCNCNCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTNCAGCGACTCGACCGNCTCCGNCACCTCGATGACGACGTCGGCCACGCCCNCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGNCGTGGNCGACGAAGTTGNGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTCGNCGCCGCCGCCATGGCCGCCGGA]

[-] EMBL OSC18661             [ANANNTTACCAAACAANGNCAAAACCTTCAGACTTANCCGCAGACTAAAGTNCTCTTGCTTGTCATGTCCAAAGAAAGTGCATAACCTCCTACGTAGTCCATNNNGGATACTTCGGGGACGGTCCNCNCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTNCAGCGACTCGACCGNCTCCGNCACCTCGATGACGACGTCGGCCACGCCCNCGTGGAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGNCGTGGNCGACGAAGTTGNGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTCGNCGCCGCCGCCATGGCCGCCGGA]


>consensus_9080#3 ANANNTTACCAAACAANGNCAAAACCTTCAGACTTANCCGCAGACTAAAGTNCTCTTGCT TGTCATGTCCAAAGAAAGTGCATAACCTCCTACGTAGTCCATNNNGGATACTTCGGGGAC GGTCCNCNCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGGTNCAGCGACTCGAC CGNCTCCGNCACCTCGATGACGACGTCGGCCACGCCCNCGTGGAGGAACGACGAGGTGGG CTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAGCTCCTTGNCGTGGNCGAC GAAGTTGNGGCCCACCCCTACGATCTTCGTGCTGGCCGCCAGGAGCCTCTCGNCGCCGCC GCCATGGCCGCCGGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9080#1      ------------------------------------------------------------
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      TGACAAGAGATTTGCTATTATTGCAGAGAGCTTAGAGCTCCATCAACATGGACAAAAATA 60
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      ------------------------------------------------------------
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      CAGCACCAGTATAGTTCATGAAAGGTCTGTTTGCTCTCACACAAAACTATAAACAGATCC 120
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      ------------------------------------------------------------
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      GGGATTACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAAGAACAGATCCAGGATTTT 180
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      ---------ATCATTATGTGCTTATAATTTCAACAAGACATTCACAACATTAACAGTTTA 51
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      CTTGATACAAATGCTCTCGAAGCTCTACATGAAAAGCATCACAAGTGATCCATAAGCATA 240
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      GCTGTTAGATGGAATCGGCAGCATAATATTTACATGGGTATTACTACCGCTGCGTATTTT 111
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      TATTACACAGGCATATGCTAAAAGAATATCTACGTTTTCATGCACTATGTCATATGGGAA 300
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      GCCACAGGTAGACAAATCAAGTGTGCTTGGCGACAAGAGATTTGCTATTAT-TGCAGAGA 170
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      GCCTATGTTTACAATGTACATTAGTTTCAGTACGGGCAAGCCAAGAATATTGTGCAAGTA 360
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      GCTTAGAGCTCCATCAACATGGACAAAAATACAGCACCGGTATAGTTCATGAAAGGTCTG 230
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      CACTCCGGTTTCATGAAATTAATGGACCAAAATATTTTTTTTAGTTGCGCCAATAAATAA 420
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      TTTGCTATAAACAGATCCGGGATAACAATGTGGGGGTAAAGTACGGTCTGGATTTCCCAA 290
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      ATGCATGCAACCTTAATATCTTGTTTTATTGCGCAAATCAAGATGAGCATAACAATATAC 480
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      GAACAGATCCAGGATTTTCTTGATACAAATGCTCTCGAAGCTCTATCACATCAAGTAGAA 350
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      TGATATGTCCACACAACAGATTGCATAGTATTAATCTCTTGCCTATCACATCAAGTAGAA 540
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      AATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCT 410
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      AATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCAATGAGGCCGGTTATACCAGCT 600
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      TTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACA 470
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      TTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCAGGAGTACCGGTCAGTATAACA 660
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      TCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAAT 530
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      TCACCCTCCATTAATGTCATGATGGAACTGATATAACTTATTAGAGATGGTATCTTGAAT 720
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      ATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCT 590
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      ATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCATCATCAACCTTTAGCCAGAGCTCT 780
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      AGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTG 650
consensus_9080#3      ------------------------------------------------------------
consensus_9080#0      AGATCATCAGGATTAGCTACATCTGATTTTGGAATCACTGCACTAATTGGAGTGAAGGTG 840
consensus_9080#2      ------------------------------------------------------------
                                                                                  

consensus_9080#1      TCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGC-CGCAGACTGAAGTTC 709
consensus_9080#3      ----ANANNTTACC--AAACAANGNCAAAACCTTCAGACTTANC-CGCAGACTAAAGTNC 53
consensus_9080#0      TCCTGTGCTTTACCCAAAGTCCAAGGAAGACCTGCAGACTTAGC-CGCAGACTGAAGTTC 899
consensus_9080#2      -TTTTTTTTTTTTTGCATGCAACCTTAATATCTT--GTTTTATTGCGCAAATCAAGATGA 57
                               **     *         ** * **   *  ***   **** *   *  *  

consensus_9080#1      TCTTGCT--------GTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCG 761
consensus_9080#3      TCTTGCTT-------GTCATGTCCAAAGAAAGTGCATAACCTCCTACGTAGTCCATNNNG 106
consensus_9080#0      TCTTGCT--------GTCATGTCCAAAGCAAGTGCATAACCTCCTACGAAGTCCATGGCG 951
consensus_9080#2      GCATAACAATATACTGATATGTCCACACAA--CAGATTGCATAGTATTAATCTCTTGCCT 115
                       * *           *  ******* *  *     **  * *  **   *   * *    

consensus_9080#1      GATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGG 821
consensus_9080#3      GATACTTCGGGGACGGTCCNCNCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGG 166
consensus_9080#0      GATGCTTCGGGGACGTCGCGCGCGCGCTGGGAGATGACAACGGCAAGCTCGACCTCGTGG 1011
consensus_9080#2      ATCACATCAAGTAGAA--AATGACCGCTTGCGCTTCTGAACATCAAACTCAACATCATGA 173
                          * **  * *           **** *    *   ***  *** *** ** ** ** 

consensus_9080#1      TGCAGCGACTCGACCGGCTCCGGCACCTCGA--TGGCGGCGCCGG--CCACGCCCGCGTG 877
consensus_9080#3      TNCAGCGACTCGACCGNCTCCGNCACCTCGA--TGACGACGTCGG--CCACGCCCNCGTG 222
consensus_9080#0      TGCAGCGACTCGACCGGCTCCGGCACCTCGA--TGGCGGCGCCGG--CCACGCCCGCGTG 1067
consensus_9080#2      GGC--CGGTTATACCAGCTTTGATCTTCTGTCCTGGTCGTACTGGGCCTACACCCTCA-G 230
                        *  **  *  ***  **  *       *   **        **  * ** *** *  *

consensus_9080#1      GAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAG 937
consensus_9080#3      GAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAG 282
consensus_9080#0      GAGGAACGACGAGGTGGGCTTCAGGAACAGCACCGGCTCCTTGGGGACGGGGTTCCCGAG 1127
consensus_9080#2      GAGTACCGGTCAGTATAACATCACC--CTCCATTAATGTCATGATGGAACTGATAT-AAC 287
                      *** * **   **     * ***    *  **       * **  *     * *    * 

consensus_9080#1      CTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCT---GGCCGC 994
consensus_9080#3      CTCCTTGNCGTGGNCGACGAAGTTGNGGCCCACCCCTACGATCTTCGTGCT---GGCCGC 339
consensus_9080#0      CTCCTTGGCGTGGGCGACGAAGTTGCGGCCCACCCCTACGATCTTCGTGCT---GGCCGC 1184
consensus_9080#2      TTATTAGAGATGGTATCTTGAATATCATATCACTTGTAGATCCCTTCTGCCTAAGTTCAT 347
                       *  * *   ***       * *       ***   **    * *  ***    *  *  

consensus_9080#1      CAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGG 1054
consensus_9080#3      CAGGAGCCTCT-CGNCGCCGCCGCCATGGCCGCCGGA----------------------- 375
consensus_9080#0      CAGGAGCCTCTGCGCCGCCGCCGCCATGGCCGCCGGAGGAGAGCTGCGAGCGGCGGAGGG 1244
consensus_9080#2      CATCAACATTT-AGCCAGAGCT-CTAGATCATCAGGATTAGCTACATCTGATTTTGGAAT 405
                      **  * * * *  * *   **  * *   *  * ***                       

consensus_9080#1      ATGCGTCGATCGAGGAGGTGGAGGTGGTGGTGACGGGGA 1093
consensus_9080#3      ---------------------------------------
consensus_9080#0      ATGCGTCGATCGAGGAGGTGGAGGTG------------- 1270
consensus_9080#2      CACTGC--------------------------------- 411
                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)