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Oryza sativa
cluster # 9102 cluster # 9102       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9102#0 length = 1584 sequences # 5  
consensus_9102#1 length = 872 sequences # 1  

consensusID : consensus_9102#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1584
fasta sequence
                              [TCGGACGCGCCGCCGCCGGTTGCCCGGTCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTACGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATGGACGGGAGCCGCCAGGAGATGCCGCCGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTAAGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGCCAGGTCTCCTGGAAAGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACTTGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCGTATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCCTTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCATCCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCTATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTGTTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGGATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCTGTGACCATGTGAATGCTGCCTTAATATTATATTATCGTTGGTTAATGGTTATGTTGTGTGACGCCGGAGGGATGTCGCTGAGAG]

[+] EMBL AK062095             [TCGGACGCGCCGCCGCCGGTTGCCCGGTCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTACGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATGGACGGGAGCCGCCAGGAGATGCCGCCGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTAAGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGCCAGGTCTCCTGGAAGGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACTTGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCGTATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCCTTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCATCCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCTATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTGTTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGGATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCA                                                                                                     ]
[+] EMBL AK101235             [  GGACGCGCCGCCGCCGGTTGCCCGGTCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTACGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATGGACGGGAGCCGCCAGGAGATGCCGCCGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTAAGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGCCAGGTCTCCTGGAAAGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACTTGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCGTATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCCTTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCATCCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCTATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTGTTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGGATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCTGTGACCATGTGAATGCTGCCTTAATATTATATTATCGTTGGTTAATGGTTATGTTGTGTGACGCCGGAGGGATGTCGCTGAGAG]
[+] EMBL AK122025             [  GGACGCGCCGCCGCCGGTTGCCCGGTCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTACGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATGGACGGGAGCCGCCAGGAGATGCCGCCGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTAAGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGCCAGGTCTCCTGGAAAGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACTTGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCGTATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCCTTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCATCCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCTATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTGTTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGGATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCTGTGACCATGTGAATGCTGCCTTAATATTATATT                                                   ]
[+] EMBL CB642990             [                           TCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTACGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATAGACGGGAGCCGCCAGGAGATGCCGCCGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTAAGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGCCAGGTCTCCTGGAAAGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACTTGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCGTATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCCTTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCATCCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCTATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTGTTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGGATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       ]
[-] EMBL CB642991             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                           CCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGAGGTATCTGTAGTATGAGAAA                                                                                                                              ]


>consensus_9102#0 TCGGACGCGCCGCCGCCGGTTGCCCGGTCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTA CGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATGGACGGGAGCCGCCAGGAGATGCCGC CGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTA AGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGC CAGGTCTCCTGGAAAGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACT TGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCG TATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCC TTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCAT CCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCT ATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTG TTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGG ATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTT GTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTT ATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATG TTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGG TTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTG GTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTC AAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGG AAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCC CTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTG GTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCC CAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAAT GATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGA TTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTG TATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCT GTGACCATGTGAATGCTGCCTTAATATTATATTATCGTTGGTTAATGGTTATGTTGTGTG ACGCCGGAGGGATGTCGCTGAGAG



consensusID : consensus_9102#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 872
fasta sequence
                              [CTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGTTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACCGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCTGTGACCATGTGAATGCTGCCTTAATATTATATTAAAAAAAAAAAAAAAA]

[-] EMBL CA760136             [CTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGTTTATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACCGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCTGTGACCATGTGAATGCTGCCTTAATATTATATTAAAAAAAAAAAAAAAA]


>consensus_9102#1 CTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTTGTTCGAGGTCTTCCATA TTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGTTTATGGCGGTGAGCACATT CTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATGTTCTTGGCAGGCTTCAC ACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGGTTCTGCGACGAGAAGAA ATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTGGTGAAATGCTTCTCATG GTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTCAAGTCTTTCGTCTTGAG TTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGGAAAATCAGGCTCTCTTT GTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCCCTGAAAGATGGGGCGGA AAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTGGTGAACCTTGGACCGCG GTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCCCAGACTTTCAAGTAGAC AACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAATGATGTTCTCATCAAGTT TTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGATTTAATGGTTTCTTGAC CTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTGTATCTGTAGTATGAGAA ATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCTGTGACCATGTGAATGCT GCCTTAATATTATATTAAAAAAAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9102#0      TCGGACGCGCCGCCGCCGGTTGCCCGGTCTCCTCGCCGGCCGGCGGATCCGGTGAAGCTA 60
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      CGGATTAGTGAGTGGTAGGAGCAGCAGCGGCCATGGACGGGAGCCGCCAGGAGATGCCGC 120
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      CGCCAACGGAGCTGAGCGCTCTCGGCCACAGGGAAGTTGCTGCTGCAGAAAGGCCCTTTA 180
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      AGAAAACCTGCCACTCATCAGTGCCTACATCTTCTACCTTGTGTGAACCCCATGTTTGGC 240
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      CAGGTCTCCTGGAAAGCCTCCTTCACCAAATCATTGCTTTGCTTAGCTCATTCCAGGACT 300
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      TGCTTGCTTTTAGTGCCACCTGCCACTCTTGGCGAGCTGCGCTATCTTCCTTTCCATCCG 360
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      TATATACTTTCAACTTCCCACCTCTCTGCCTCAAACTAAATACACCTAATATCCGTCCCC 420
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      TTCGCGTCCTTTTGAAGGACAATCTTTTATCTTACTGCAAATGGCAGCTTGATGATCCAT 480
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      CCAAGAGAAACATATCCCTTCGTTGTTCAGCTCCGCCAGATGCTCCAAATCGCATGCGCT 540
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      ATTTGGGCTGCTCATATGGATATCTCATCTTCTCCTATCATGAGAAGAACTGCCTCTTTG 600
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      TTGATGCTTACACTAGCACTAAGCTGAAGTCTCCCAAACTCAACTTCATGGGCGACAGGG 660
consensus_9102#1      ------------------------------------------------------------
                                                                                  

consensus_9102#0      ATATCTACTACGGCATCCTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTT 720
consensus_9102#1      -----------------CTTACGGCTCCACTTAATTCACCCAACTCACATCTGATACTTT 43
                                       *******************************************

consensus_9102#0      GTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGGTT 780
consensus_9102#1      GTTCGAGGTCTTCCATATTCTATTGGCAGGTTGGAACAAACTCTTGGACAAAGCACGTTT 103
                      ********************************************************* **

consensus_9102#0      ATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATG 840
consensus_9102#1      ATGGCGGTGAGCACATTCTTCAGATTGTGCTCTTCAAAGGTGAGATTTTTGCGATGGATG 163
                      ************************************************************

consensus_9102#0      TTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGG 900
consensus_9102#1      TTCTTGGCAGGCTTCACACCATGCAATTTGCACCTGAGCTCAGCATACAGGAAGTAGCGG 223
                      ************************************************************

consensus_9102#0      TTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTG 960
consensus_9102#1      TTCTGCGACGAGAAGAAATGGTTACAGGCCCACGTTCTGGGCCATGGCTGGTGGCCTGTG 283
                      ************************************************************

consensus_9102#0      GTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTC 1020
consensus_9102#1      GTGAAATGCTTCTCATGGTTGATTTGTCAACAGACCGCGACCAATTGCCTCGCACCTTTC 343
                      ************************************************************

consensus_9102#0      AAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGG 1080
consensus_9102#1      AAGTCTTTCGTCTTGAGTTTTCTGCTGAAACAGTTGAGTGTGTGAAGATGGAAAGGTTGG 403
                      ************************************************************

consensus_9102#0      AAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCC 1140
consensus_9102#1      AAAATCAGGCTCTCTTTGTCAACCTTGATGGGAGGGACCCTACATTCTCTTGCACGAGCC 463
                      ************************************************************

consensus_9102#0      CTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTG 1200
consensus_9102#1      CTGAAAGATGGGGCGGAAAGAGTAACTGGATTTATGTTGCGAAACCATCTGGAGATTCTG 523
                      ************************************************************

consensus_9102#0      GTGAACCTTGGACTGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCC 1260
consensus_9102#1      GTGAACCTTGGACCGCGGTCGAGCTCGGTCAGCCAGTTCCTAGTAGAATAGACCGCGTCC 583
                      ************* **********************************************

consensus_9102#0      CAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAAT 1320
consensus_9102#1      CAGACTTTCAAGTAGACAACATGTGGGTGGTACCCAGTTTGATTTATGATGTCAACCAAT 643
                      ************************************************************

consensus_9102#0      GATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGA 1380
consensus_9102#1      GATGTTCTCATCAAGTTTTAGCCAGCGTTGCACAAGCCATATCCGTACTTGCTAGTGTGA 703
                      ************************************************************

consensus_9102#0      TTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTG 1440
consensus_9102#1      TTTAATGGTTTCTTGACCTGTGGCATATGTATGGATTCTTGTAAGAGTACACTGAAGTTG 763
                      ************************************************************

consensus_9102#0      TATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCT 1500
consensus_9102#1      TATCTGTAGTATGAGAAATGCAGGTTCTTGCATGTACTGTGCAGGGTTGGTCTATGTTCT 823
                      ************************************************************

consensus_9102#0      GTGACCATGTGAATGCTGCCTTAATATTATATTATCGTTGGTTAATGGTTATGTTGTGTG 1560
consensus_9102#1      GTGACCATGTGAATGCTGCCTTAATATTATATTAAAAAAAAAAAAAAAA----------- 872
                      **********************************         **               

consensus_9102#0      ACGCCGGAGGGATGTCGCTGAGAG 1584
consensus_9102#1      ------------------------
                                              




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)