These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9103#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2797 fasta sequence [TGGCCTCCTCCGCCGCCGCCCGGTCCCGCGCCGCCGCCTCCGCCGCGTGGGCGCGCCTCCTCTCCCTGCGCCCCAGCCCTCCCGTATCCTCCACCCACCATCTAACCCTGCGGATCGCCTCCCCTCGCCGCCACTTCGCCTTCTCCGCCAACGCCTCCTCCGGCAGCTCTAGGCTCAAGCAGATCCAGAGCGAGCGGGTCATCCACGACCTCTTCGCCGAGCTCCAGCGAGAGCGCCAGCGGGACCGCCAGGAGGAGGATGAGGATGAGGGTGAGGATGAGGACTACCTGGGCGTCAAGCCGCTCATCGAGAAGCTCGAGCGCCGCAGGGCCAAGGAGGAGGCCGCGCCGGACGATTCCTTCTGGGAGCCCACCGACTCCGACAGTGACGAGGAGGACGAGCGCTACACCCCTGACGCCATCAAGCGCCGCGTCGACGAGTTCGAGCGCAAGTGCAACCGCCACTCCGAACTCCTACGCTCCTTCGCCGAAGCCGAAACCCTTGACGATGCCCACAAATGGATGACCAAGATCGACAGATTCGAGGAGCGCCATTTGAAGCTTCCACTGGAGTACAGAGTCATCGGCGACATGATGAACCGCCTCAAAGATGCCACCGGCAAGGACCGCTTTCTTCTCCTCCAGAAGCTTAACCGAGCTGTTAGAATCATGGAATGCAGGGAAGCATACGATCCCAGCAACCCCTCCAATTTCGGGGTCATCCAACACCAGCAGGTCGGCTCTCCGGAGGATCTTGTGCTCAATGCTGGCTTTGACAGGGAGAAGCAGATGATCCAAGGGGCTGGTGACGACGACGACGACGAGGAATTCAATGAAGACAAGGAGAAGGATGATCTGCTCATAGAGAAGTTGAATTCTATCGAAAAGAAGATCGAGGAGAAATTAGCTGAGTTAGATCATACGTTTGGTAAGAAGGGCAGAGTTCTAGAGGAGGAAATTAAGGATCTTGTTGAAGAGCGCAACTCCCTCACGGAGCATAAGAGGAGACCTATGTACAGGAAAGGTTTTGACGTCAAGGTCATTGATGTTAATCGGACGTGTAAAGTCACAAAGGGAGGCCAAATAGCAAAATTCACAGCATTGTTAGCGACTGGAAACTACCATGGTGTTGTAGGATTTGCAAAAGCTAGAGGTCCGACAGCCAAGATTGCAATTCAAAGGGCTTATGAGAAATGCTTCCAGGACCTCCATTACATGGAGCGATATGAGGACCACACAATTGCTCATGCAATTCAGGCCAAATATGAGAAGACAAAGATATACCTCTGGCCTGGACCAATGAGAAGTGGAATGTCTGCTGCTGGTAGGACGGTTGAAACAGTACTGTATTTAGCTGGTTTCAGCAACGTCAAGTCAAAGATTATTGGTTCAAGGAACCCCCTGAATGTTATCAAAGCTCTCTTCATAGCATTAAACGCCATTGAAACGCCAAAGGATGTTGAGCAGAAGTTTGGGCGGACCGTGGTTGAGTCATACTTATTGTAGTCATCAATTTGTTTGTCCTGTGGAGCTCGCCATCTGGCTGTGGCGATGGACGTCCAAAGAAAGAGCTAATTG-CACATCTAACCGTGTGATGTGTGGTCTTCATTTGTTTGGATGTTGGTTTCTCTACACTTTGCCCTGCAACCGGCAGTCTGAGATGTGAGACTGTAATTTTTGAGGTGATCGATCAATCAATGCTTTAGTGCCAACGGCGCAGCACATAGCAGATGGCAAGAGAAGCAAACGTTTGATTGATGATTCTTGCATAAGGTGGCCTGCCCCTTTGGTATGAGTCGTTCGTTTGGATTTGTAACCAGAGGCTCTGCCTCACGCCTACTGTTATGGTGGATTGGCAAACCGGCCACAATATGCTGATTTAGAGATAATAAAGTCCTTGAACATGTGTAGCTACTTGGTTGATTGATGTCATCCCGGAGATTTGCAGACGCATCGTGCATTGCATGCATGATGATCAATTTTATTCAATTGGCTGCCTCCATAATACCAGTAGTAACAAACAGGAAAACAGGACGCACATACATATACATGGCAGGGCACACGAAGCAGCGGCTAGCAGGCAGATGAAAAGAGGGGTTGGAATGAGATACAGTAGATACAGTAGAGTCCGTGTTTATCACTCGCTCATCTCATCGGTGCTGCAAAGCGTTAATACATTGTATGAGGAGGAGTGTTTATGGGGAATCCATTGTCGAGCCACGCTGCGTAGCCTCCTCCCATATTCTTCACGTTCTTGAACCCTGCTTCAAGGAGATCAACGCATGCTAGCTCCGACCTCTTCCCGCTTTGGCACCCCACAACCACATGCTCCTCTTTGCTCACCAGCGACGAGAACTGCTCCACAAACAGAGGATTCTTTTCCCTCCCTTGCGGCGTGACGAACATGAAGGGCACGTTGAGGGAGTTGTGTAGATGGCCCTTGTTCATTTCCTCCTCTGTCCTGACGTCGACGTAACGGTGGCCGGCCGAGGTGATAAGGTCGCTCGCCGCCGCCACATCCACCGTTACCACCGGCACCGGCGATTCAGAGCCGGCGGCGCTGGTTTCATAGGGAGGCGCCATTGCAATTGCTAGCCTAGCCCTGCTCTCTACTAGTAGATTATATATGCACACACAACTCAGAGGAAGAAGGAGGAGGAGGTGTATATATGATGAATGTATGTGTTAGTTGGGCACGTGCAGTGCTAGCCT---AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAGGTTAGCTAGGTTAGGTAGCG] [+] EMBL AK122073 [TGGCCTCCTCCGCCGCCGCCCGGTCCCGCGCCGCCGCCTCCGCCGCGTGGGCGCGCCTCCTCTCCCTGCGCCCCAGCCCTCCCGTATCCTCCACCCACCATCTAACCCTGCGGATCGCCTCCCCTCGCCGCCACTTCGCCTTCTCCGCCAACGCCTCCTCCGGCAGCTCTAGGCTCAAGCAGATCCAGAGCGAGCGGGTCATCCACGACCTCTTCGCCGAGCTCCAGCGAGAGCGCCAGCGGGACCGCCAGGAGGAGGATGAGGATGAGGGTGAGGATGAGGACTACCTGGGCGTCAAGCCGCTCATCGAGAAGCTCGAGCGCCGCAGGGCCAAGGAGGAGGCCGCGCCGGACGATTCCTTCTGGGAGCCCACCGACTCCGACAGTGACGAGGAGGACGAGCGCTACACCCCTGACGCCATCAAGCGCCGCGTCGACGAGTTCGAGCGCAAGTGCAACCGCCACTCCGAACTCCTACGCTCCTTCGCCGAAGCCGAAACCCTTGACGATGCCCACAAATGGATGACCAAGATCGACAGATTCGAGGAGCGCCATTTGAAGCTTCCACTGGAGTACAGAGTCATCGGCGACATGATGAACCGCCTCAAAGATGCCACCGGCAAGGACCGCTTTCTTCTCCTCCAGAAGCTTAACCGAGCTGTTAGAATCATGGAATGCAGGGAAGCATACGATCCCAGCAACCCCTCCAATTTCGGGGTCATCCAACACCAGCAGGTCGGCTCTCCGGAGGATCTTGTGCTCAATGCTGGCTTTGACAGGGAGAAGCAGATGATCCAAGGGGCTGGTGACGACGACGACGACGAGGAATTCAATGAAGACAAGGAGAAGGATGATCTGCTCATAGAGAAGTTGAATTCTATCGAAAAGAAGATCGAGGAGAAATTAGCTGAGTTAGATCATACGTTTGGTAAGAAGGGCAGAGTTCTAGAGGAGGAAATTAAGGATCTTGTTGAAGAGCGCAACTCCCTCACGGAGCATAAGAGGAGACCTATGTACAGGAAAGGTTTTGACGTCAAGGTCATTGATGTTAATCGGACGTGTAAAGTCACAAAGGGAGGCCAAATAGCAAAATTCACAGCATTGTTAGCGACTGGAAACTACCATGGTGTTGTAGGATTTGCAAAAGCTAGAGGTCCGACAGCCAAGATTGCAATTCAAAGGGCTTATGAGAAATGCTTCCAGGACCTCCATTACATGGAGCGATATGAGGACCACACAATTGCTCATGCAATTCAGGCCAAATATGAGAAGACAAAGATATACCTCTGGCCTGGACCAATGAGAAGTGGAATGTCTGCTGCTGGTAGGACGGTTGAAACAGTACTGTATTTAGCTGGTTTCAGCAACGTCAAGTCAAAGATTATTGGTTCAAGGAACCCCCTGAATGTTATCAAAGCTCTCTTCATAGCATTAAACGCCATTGAAACGCCAAAGGATGTTGAGCAGAAGTTTGGGCGGACCGTGGTTGAGTCATACTTATTGTAGTCATCAATTTGTTTGTCCTGTGGAGCTCGCCATCTGGCTGTGGCGATGGACGTCCAAAGAAAGAGCTAATTG CACATCTAACCGTGTGATGTGTGGTCTTCATTTGTTTGGATGTTGGTTTCTCTACACTTTGCCCTGCAACCGGCAGTCTGAGATGTGAGACTGTAATTTTTGAGGTGATCGATCAATCAATGCTTTAGTGCCAACGGCGCAGCACATAGCAGATGGCAAGAGAAGCAAACGTTTGATTGATGATTCTTGCATAAGGTGGCCTGCCCCTTTGGTATGAGTCGTTCGTTTGGATTTGTAACCAGAGGCTCTGCCTCACGCCTACTGTTATGGTGGATTGGCAAACCGGCCACAATATGCTGATTTAGAGATAATAAAGTCCTTGAACATGTGTAGCTACTTGGTTGATTGATGTCATCCCGGAGATTTGCAGACGCATCGTGCATTGCATGCATGATGATCAATTTTATTCAA ] [+] EMBL AK059054 [ GTAGGACGGTTGAAACAGTACTGTATTTAGCTGGTTTCAGCAACGTCAAGTCAAAGATTATTGGTTCAAGGAACCCCCTGAATGTTATCAAAGCTCTCTTCATAGCATTAAACGCCATTGAAACGCCAAAGGATGTTGAGCAGAAGTTTGGGCGGACCGTGGTTGAGTCATACTTATTGTAGTCATCAATTTGTTTGTCCTGTGGAGCTCGCCATCTGGCTGTGGCGATGGACGTCCAAAGAAAGAGCTAATTG CACATCTAACCGTGTGATGTGTGGTCTTCATTTGTTTGGATGTTGGTTTCTCTACACTTTGCCCTGCAACCGGCAGTCTGAGATGTGAGACTGTAATTTTTGAGGTGATCGATCAATCAATGCTTTAGTGCCAACGGCGCAGCACATAGCAGATGGCAAGAGAAGCAAACGTTTGATTGATGATTCTTGCATAAGGTGGCCTGCCCCTTTGGTATGAGTCGTTCGTTTGGATTTGTAACCAGAGGCTCTGCCTCACGCCTACTGTTATGGTGGATTGGCAAACCGGCCACAATATGCTGATTTAGAGATAATAAAGTCCTT ] [+] EMBL AA750878 [ CCTGAATGTTATCAAAGCTCTCTTCATAGCATTAAACGCCA TGAAACGCCAAAGGATGTTGAGCAGAAGTTTGGGCGGACCGTGGTTGAGTCATACTTATTGTAGTCATCAATTTGTTTGTCCTGTGGAGCTCGTCATCTGGCTGTGGCGATGGACGTCCAAAGAAAGAGCTAATTGCCACAc ] [+] EMBL CF297365 [ ttttttTTTGCAGACGCATCGTGCATTGCATGCATGATGATCAATTTTATTCAATTGGCTGCCTCCATAATACCAGTAGTAACAAACAGGAAAACAGGACGCACATACATATACATGGCAGGGCACACGAAGCAGCGGCTAGCAGGCAGATGAAAAGAGGGGTTGGAATGAGATACAGTAGATACAGTAGAGTCCGTGTTTATCACTCGCTCATCTCATCGGTGCTGCAAAGCGTTAATACATTGTATGAGGAGGAGTGTTTATGGGGAATCCATTGTCGAGCCACGCTGCGTAGCCTCCTCCCATATTCTTCACGTTCTTGAACCCTGCTTCAAGGAGATCAACGCATGCTAGCTCCGACCTCTTCCCGCTTTGGCACCCCACAACCACATGCTCCTCTTTGCTCACCAGCGACGAGAACTGCTCCACAAACAGAGGATTCTTTTCCCTCCCTTGCGGCGTGACGAACATGAAGG ] [-] EMBL AK067143 [ CGTGCATTGCATGCATGATGATCAATTTTATTCAATTGGCTGCCTCCATAATACCAGTAGTAACAAACAGGAAAACAGGACGCACATACATATACATGGCAGGGCACACGAAGCAGCGGCTAGCAGGCAGATGAGAAGAGGGGTTGGAATGAGATACAGTAGATACAGTAGAGTCCGTGTTTATCACTCGCTCATCTCATCGGTGCTGCAAAGCGTTAATACATTGTATGAGGAGGAGTGTTTATGGGGAATCCATTGTCGAGCCACGCTGCGTAGCCTCCTCCCATGTTCTTCACGTTCTTGAACCCTGCTTCAAGGAGATCAACGCATGCTAGCTCCGACCTCTTCCCGCTTTGGCACCCCACAACCACATGCTCCTCTTTGCTCACTAGCGACGAGAACTGCTCCACAAACAGAGGATTCTTTTCCCTCCCTTGCGGCGTGACGAACATGAAGGGCACGTTGAGGGAGTTGTGTAGATGGCCCTTGTTCATTTCCTCCTCTGTCCTGACGTCGACGTAACGGTGGCCGGCCGAGGTGATAAGGTCGCTCGCCGCCGCCACATCCACCGTTACCACCGGCACCGGCGATTCAGAGCCGGCGGCGCTGGTTTCATAGGGAGGCGCCATTGCAATTGCTAGCCTAGCCCTGCTCTCTACTAGTAGATTATATATGCACACACAACTCAGAGGAAGAAGGAGGAGGAGGTGTATATATGATGAATGTATGTGTTAGTTGGGCACGTGCAGTGCTAGCCTAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAGGTTAGCTAGGTTAGGTAGCG] [-] EMBL CF297366 [ TCAACGCATGCTAGCTCCGACCTCTTCCCGCTTTGGCACCCCACAACCACATGCTCCTCTTTGCTCACCAGCGACGAGAACTGCTCCACAAACAGAGGATTCTTTTCCCTCCCTTGCGGCGTGACGAACATGAAGGGCACGTTGAGGGAGTTGTGTAGATGGCCCTTGTTCATTTCCTCCTCTGTCCTGACGTCGACGTAACGGTGGCCGGCCGAGGTGATAAGGTCGCTCGCCGCCGCCACATCCACCGTTACCACCGGCACCGGCGATTCAGAGCCGGCGGCGCTGGTTTCATAGGGAGGCGCCATTGCAATTGCTAGCCTAGCCCTGCTCTCTACTAGTAGATTATATATGCACACACAACTTAGAAGAAGAAGGAGGAGGAGGTGTATATATGATGAATGTATGTGTTAGTTGGGCACGTGCAGTGCTAGCCT AGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGAGGAGGTTAGCTAGGTTAGGTAGCG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||