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Oryza sativa
cluster # 9112 cluster # 9112       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9112#0 length = 1676 sequences # 1  
consensus_9112#1 length = 1551 sequences # 5  

consensusID : consensus_9112#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1676
fasta sequence
                              [CCCACCACCGAGACCGCCGCCTATTCTTTCCTTCCTCCCTCTCTCCGGTCTTTGCTTCTCGCGAGGAAGTTGGCATCCTAGATACATACTCCTTCCATGGCGCCGTCCCAGATCCGCTTCGGCCACCAGATCCCCTTCTCCCGCCCCGACTCCGACGAGGAGGAAGAGGAGGACGACGAGGACGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTACGAAGGGGAGGAGGAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGGAGGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGTGCGGCACGTCTCGCACGTCACCTTCGACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCCGCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCATGCTCATACGATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAACTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTACATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTGACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACTCCAGAACAAGTGATGCACTGCAACACTGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGTTTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATTAGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCAACTATTCATTTCTGACCAATCAACTTGTACGATGCCATCATTACTTTCGGTTGTTAGT]

[+] EMBL AK067772             [CCCACCACCGAGACCGCCGCCTATTCTTTCCTTCCTCCCTCTCTCCGGTCTTTGCTTCTCGCGAGGAAGTTGGCATCCTAGATACATACTCCTTCCATGGCGCCGTCCCAGATCCGCTTCGGCCACCAGATCCCCTTCTCCCGCCCCGACTCCGACGAGGAGGAAGAGGAGGACGACGAGGACGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTACGAAGGGGAGGAGGAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGGAGGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGTGCGGCACGTCTCGCACGTCACCTTCGACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCCGCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCATGCTCATACGATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAACTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTACATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTGACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACTCCAGAACAAGTGATGCACTGCAACACTGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGTTTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATTAGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCAACTATTCATTTCTGACCAATCAACTTGTACGATGCCATCATTACTTTCGGTTGTTAGT]


>consensus_9112#0 CCCACCACCGAGACCGCCGCCTATTCTTTCCTTCCTCCCTCTCTCCGGTCTTTGCTTCTC GCGAGGAAGTTGGCATCCTAGATACATACTCCTTCCATGGCGCCGTCCCAGATCCGCTTC GGCCACCAGATCCCCTTCTCCCGCCCCGACTCCGACGAGGAGGAAGAGGAGGACGACGAG GACGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTACGAAGGGGAGGAG GAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGGA GGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGTGCGGCACGTCTCGCACGTCACCTTCG ACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCCG CGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCATGCTCATACGA TAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAACT TGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTACA TGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTGAC GGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACTCC AGAACAAGTGATGCACTGCAACACTGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACC TCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACA TGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGAC TCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAA GACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATT CCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGA CAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTAC TCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGC TGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCC CATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAA TGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACA CCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGT ATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGTTT ACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATTAG CCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCAAC TATTCATTTCTGACCAATCAACTTGTACGATGCCATCATTACTTTCGGTTGTTAGT



consensusID : consensus_9112#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 1551
fasta sequence
                              [GAGGAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGGAGGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGGTGGCGGCGGCGCTGCGGAGGTCGCTGCTGCTGTGCAGCAGCGTGCGCGCCGCGGAGGACGAAGGGGCCGCGGCGGCGGCGGCGGCTGCTGCGGGGATGCAGATTGGCCGGCCCACCGACGTGCGGCACGTCTCGCACGTCACCTTCGACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCCGCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCAATGCTCATACGATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAACTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTACATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTGACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACTCCAGAACAAGTGATGCACTGCAACAC-TGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGTTTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATTAGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCAACTATTCATTTCTGACCAATCAAAAAAAAAGATGCCAAAAAAAAAAGA]

[+] EMBL AY364311             [GAGGAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGGAGGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGGTGGCGGCGGCGCTGCGGAGGTCGCTGCTGCTGTGCAGCAGCGTGCGCGCCGCGGAGGACGAAGGGGCCGCGGCGGCGGCGGCGGCTGCTGCGGGGATGCAGATTGGCCGGCCCACCGACGTGCGGCACGTCTCGCACGTCACCTTCGACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCCGCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCAATGCTCATACGATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAACTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTACATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTGACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACTCCAGAACAAGTGATGCACTGCAACAC TGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGTTTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATTAGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCAACTATTCATTTCTGACCAATCAAAAAAAAA                  ]
[+] EMBL CB683819             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTTCCAAGTGGAGTATTGGACTCATTGACTCCAGAACAAGTGATGCACTGCAACACATGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTACGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTT                                                                                                                                                                                              ]
[+] EMBL CB683823             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ACTTCCTAGTGGAGTATTGGACTCATTGACTCCAGAACAAGTGATGCACTGCAACAC TGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTAT                                                                                                                                                                                                                                ]
[+] EMBL CA305814             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                 GAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTNTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTNTGCCATNAAGTGCATTNCCATCAAGCTCTGGTTCCCNAAGTGACAAANATGAACCTCAGGCATTANAGCATTTGGACAAGt                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CB683380             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               CGCAACATTGCTATGGTTTTTGCACCAAACATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGTTTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATTAGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCAACTATTCATTTCTGACCAATCAACTTGTACGATGCCAAAAAAAAAAGA]


>consensus_9112#1 GAGGAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGG GGAGGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGGTGGCGGCGGCGCTGCGGAGGTCG CTGCTGCTGTGCAGCAGCGTGCGCGCCGCGGAGGACGAAGGGGCCGCGGCGGCGGCGGCG GCTGCTGCGGGGATGCAGATTGGCCGGCCCACCGACGTGCGGCACGTCTCGCACGTCACC TTCGACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGC CCCGCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCAATGCTCA TACGATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATAT CAACTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAA CTACATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGT CTGACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTG ACTCCAGAACAAGTGATGCACTGCAACACTGAAGAAGAATGCGCTCTCCTTGCGAGTACT CTACCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTG GAACATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAAC ATGACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTT CTCAAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGT GCATTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCAT TTGGACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGG GCTACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGT AGTGCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTT TCTCCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAAT GACAATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGC AGACACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCC TGTGTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCA TGTTTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGT ATTAGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATT TCAACTATTCATTTCTGACCAATCAAAAAAAAAGATGCCAAAAAAAAAAGA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9112#0      CCCACCACCGAGACCGCCGCCTATTCTTTCCTTCCTCCCTCTCTCCGGTCTTTGCTTCTC 60
consensus_9112#1      ------------------------------------------------------------
                                                                                  

consensus_9112#0      GCGAGGAAGTTGGCATCCTAGATACATACTCCTTCCATGGCGCCGTCCCAGATCCGCTTC 120
consensus_9112#1      ------------------------------------------------GAGGAGGAGATG 12
                                                                       **       * 

consensus_9112#0      GGCCACCAGATCCCCTTCTC-CCGCCCCGACTCCGACGAGGAGGAAGAGGAGGACGACGA 179
consensus_9112#1      GAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGGAGGAGGAGGA 72
                      *    * ** * **  * **  **** *   * *  *  *  *  ** ****** ** **

consensus_9112#0      GGACGAGGAGGTGGAGGAGGAGGAGGAGGAGGAGGAGGAAGAGGAGTACGAAGGGGAGGA 239
consensus_9112#1      GGA-GGGGTGTCCGTCGTGGAGACGGTGGCGGCGGCGCT-GCGGAGGTCGCTGCTGCTGT 130
                      *** * ** *   *  * ****  ** ** ** ** *   * ****  **  *  *  * 

consensus_9112#0      GGAGGAGATGGAGGGCGAGGTGCCGGTGTCATCGCCGCTGATGCTGCCGGCGGCGAGGGG 299
consensus_9112#1      GCAG----CAGCGTGCGCGCCGCGGAGGACGAAGGGGCCG-CGGCGGCGGCGGCGGCTGC 185
                      * **      * * *** *  ** *  * *   *  ** *  *  * ********   * 

consensus_9112#0      AGGAGGAGGAGGAGGGGTGTCCGTCGTGGAGACGTGCGGCACGTCTCGCACGTCACCTTC 359
consensus_9112#1      TG--CGGGGATGCAGATTGGCCGGCCCACCGACGTGCGGCACGTCTCGCACGTCACCTTC 243
                       *   * *** *  *  ** *** *     ******************************

consensus_9112#0      GACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCC 419
consensus_9112#1      GACCGCTTCGTGGGGTTCCTCGGCCTCCCCGCCGACCTCGAGCCCGACGTGCCCCGCCCC 303
                      ************************************************************

consensus_9112#0      GCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCA-TGCTCATAC 478
consensus_9112#1      GCGCCTAGCGCCAGTGTGAGTGTATTTGGAGTTTCACCAACGTCCATGCAATGCTCATAC 363
                      ************************************************** *********

consensus_9112#0      GATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAA 538
consensus_9112#1      GATAACAGAGGAAACAGTGTGCCAACAATACTATTGACCATGCAAAAGAAGTTATATCAA 423
                      ************************************************************

consensus_9112#0      CTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTA 598
consensus_9112#1      CTTGGGGGGCTTCAGGCTGAAGGAATCTTCAGAATAAATGCAGACAATAGTCAGGAACTA 483
                      ************************************************************

consensus_9112#0      CATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTG 658
consensus_9112#1      CATGTCAGGGAGCAACTAAACATGGGTGTTGTTCCGGATGGTGTTGACATGCACTGTCTG 543
                      ************************************************************

consensus_9112#0      ACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACT 718
consensus_9112#1      ACGGGCCTCATAAAGGCATGGTTTCGTGAACTTCCAAGTGGAGTATTGGACTCATTGACT 603
                      ************************************************************

consensus_9112#0      CCAGAACAAGTGATGCACTGCAACACTGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTA 778
consensus_9112#1      CCAGAACAAGTGATGCACTGCAACACTGAAGAAGAATGCGCTCTCCTTGCGAGTACTCTA 663
                      ************************************************************

consensus_9112#0      CCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAA 838
consensus_9112#1      CCTCCAGTGGAAGCAGCACTACTTGATTGGGCCATCAATCTGATGGCAGATGTTGTGGAA 723
                      ************************************************************

consensus_9112#0      CATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATG 898
consensus_9112#1      CATGAAAACTACAATAAGATGAACGCTCGCAACATTGCTATGGTTTTTGCACCAAACATG 783
                      ************************************************************

consensus_9112#0      ACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTC 958
consensus_9112#1      ACTCAGATGGCCGATCCCTTGACTGCTTTGATACATGCAGTTCAAGTGATGAATTTTCTC 843
                      ************************************************************

consensus_9112#0      AAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCA 1018
consensus_9112#1      AAGACACTTATCTTGAAGACTGTGAAGGGACGGGAAGAAACAGCTATGCCATCAAGTGCA 903
                      ************************************************************

consensus_9112#0      TTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTG 1078
consensus_9112#1      TTCCCATCAAGCTCTGGTTCCCCAAGTGACAAAGATGAACCTCAGGCATTAGAGCATTTG 963
                      ************************************************************

consensus_9112#0      GACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCT 1138
consensus_9112#1      GACAAGCCCACCATTTGTTCAACTCAGCAAAATAATGATTTTCCAATGATTAGTGGGGCT 1023
                      ************************************************************

consensus_9112#0      ACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGT 1198
consensus_9112#1      ACTCTTGATCACTTCCTCTTTAGAGCAGAACCATTGCGTCATAATGACGCACAAGGTAGT 1083
                      ************************************************************

consensus_9112#0      GCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCT 1258
consensus_9112#1      GCTGGACGACCCAAGAAACGCGACAATAAGGACCATGACAACAGCAGCAGGGAATTTTCT 1143
                      ************************************************************

consensus_9112#0      CCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGAC 1318
consensus_9112#1      CCCATAGATAGTGATTCAAGTAGCCAAGCCAGCAATTCTGCAAGCAAATTCAGTAATGAC 1203
                      ************************************************************

consensus_9112#0      AATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGA 1378
consensus_9112#1      AATGTGGAAGGTTTATTTGACAGATTTAAATTTCGGAAAGGAGTAGGGAGGCTGTGCAGA 1263
                      ************************************************************

consensus_9112#0      CACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGT 1438
consensus_9112#1      CACCCTGTTTTTCAGTTGAGTAGGTCCATGAAAAAATCAGGTGAAGCGGGACAAGCCTGT 1323
                      ************************************************************

consensus_9112#0      GTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGT 1498
consensus_9112#1      GTATGAAGTAATGACACGATAGGGTGTAGTTGATAGTTTCCATTATTTTTAGAGGCATGT 1383
                      ************************************************************

consensus_9112#0      TTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATT 1558
consensus_9112#1      TTACTTAACATTTCATCAACCATTGTCCTAGATTTCGTGAGTAGAACTGTAGAAGGTATT 1443
                      ************************************************************

consensus_9112#0      AGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCA 1618
consensus_9112#1      AGCCAATTTGGTGGTAGTAGTACTGAACTACTGATGTCGAGTTCCTGCCTGTATATTTCA 1503
                      ************************************************************

consensus_9112#0      ACTATTCATTTCTGACCAATCAACTTGTACGATGCCATCATTACTTTCGGTTGTTAGT 1676
consensus_9112#1      ACTATTCATTTCTGACCAATCAAAAAAAAAGATGCCAAAAAAAAAAGA---------- 1551
                      ***********************     * *******  *  *               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)