cluster # 9113

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Oryza sativa
cluster # 9113 cluster # 9113 Sequences # 6 consensus # 3

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9113#0 length = 2116 sequences # 4

consensus_9113#1 length = 1377 sequences # 1
consensus_9113#2 length = 688 sequences # 1

consensusID : consensus_9113#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2116
fasta sequence

                              [CCCCCTTGCTCTGCCTCTGCCTCTTCTTCCTCCTCCTTGCTCTGCTTCTGCTCTCTAGCTAGCCTTCTTCCTATTGGAAGCTTCTTCTCAAGTGAAAATTAAGAAGCTAGTATTGGCTGAGCTGAGCTGAGCACCCAGCCAAAGTCTTGGGCCTACTTAATTAGTGAGGTGAAGGGGAGATCGTCGTGTCGTCATCCATGGTTGCTGCCATCTGATGAGCGATGAACCAGTTCGTCCCTGATTGGAGCAACATGGGTGACGCATCCAGGACACTCGGCGAAGATGACAACCTCATTGAGCTGCTCTGGTGCAACGGCCATGTCGTCATGCAGAGCCAGAATCACCACCGGAAGCTGCCGCCGAGGCCGCCGGAGAAGGCGGCGGCGGCGGCGGTGCAAGAAGACGAGGCCGGCCTGTGGTTCCCGTTCGCGCTCGCCGACTCGCTGGAGAAGGACATCTTCTCGGACCTCTTCTACGAGGCGCCCGTCGCGGCGACGGCGGAGGCGGCGCCTGCTGGCCCGGGCGCGGGCGCCGACGGCGAAGGAAAGACTTGCAAGGGCGACGCGGCAATGGCGGAGGAGGAGCGTGGCGGGCCGGGCGCGGCGTCCGAGGCGCCGCGCGAGCTGATGCCGCCGCCCAAGTCGACGAACGCGTCCTGCTCGAGGCAGCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGCTCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCGGCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCAACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCTCGGCGGTGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCGCGACCACGGCCACGGCCACGAGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCACCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCGAGGACTCCGAGAGCCCCAGCGAGGTAGGCGTCCTCCCGTCGAACACCAACAGAGACGCACACTGACACTGACACCGGCGGCGCGTGGGATGCAATGCAGGACGCGGAGTCGGAGTCGGCGGCGCTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTGCAGGAGCTCATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTGCAGATGATGTGGATGGGGAGCGGGATGGCGCCGCCGGTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCGGGATGGGGGCGGCGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCC-GCCGCCGA-CCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCAC-TTCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAACACAGGATCAGGATAATTA-ACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACAGCAGGACGGAGCA-GAGGAATTTGACA-GGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCA-GGAACTAGCTGTGATGTGCAGAAGATGTTA-GCAAAATCTCTTGAAGATCTCTAACTGA-TTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTA-CCATTGGAATTAACA-TTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAAATTGACACACTTCTTT]

[+] EMBL AK060505             [CCCCCTTGCTCTGCCTCTGCCTCTTCTTCCTCCTCCTTGCTCTGCTTCTGCTCTCTAGCTAGCCTTCTTCCTATTGGAAGCTTCTTCTCAAGTGAAAATTAAGAAGCTAGTATTGGCTGAGCTGAGCTGAGCACCCAGCCAAAGTCTTGGGCCTACTTAATTAGTGAGGTGAAGGGGAGATCGTCGTGTCGTCATCCATGGTTGCTGCCATCTGATGAGCGATGAACCAGTTCGTCCCTGATTGGAGCAACATGGGTGACGCATCCAGGACACTCGGCGAAGATGACAACCTCATTGAGCTGCTCTGGTGCAACGGCCATGTCGTCATGCAGAGCCAGAATCACCACCGGAAGCTGCCGCCGAGGCCGCCGGAGAAGGCGGCGGCGGCGGCGGTGCAAGAAGACGAGGCCGGCCTGTGGTTCCCGTTCGCGCTCGCCGACTCGCTGGAGAAGGACATCTTCTCGGACCTCTTCTACGAGGCGCCCGTCGCGGCGACGGCGGAGGCGGCGCCTGCTGGCCCGGGCGCGGGCGCCGACGGCGAAGGAAAGACTTGCAAGGGCGACGCGGCAATGGCGGAGGAGGAGCGTGGCGGGCCGGGCGCGGCGTCCGAGGCGCCGCGCGAGCTGATGCCGCCGCCCAAGTCGACGAACGCGTCCTGCTCGAGGCAGCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGCTCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCGGCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCAACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCTCGGCGGTGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCGCGACCACGGCCACGGCCACGAGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCACCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCGAGGACTCCGAGAGCCCCAGCGAGGTAGGCGTCCTCCCGTCGAACACCAACAGAGACGCACACTGACACTGACACCGGCGGCGCGTGGGATGCAATGCAGGACGCGGAGTCGGAGTCGGCGGCGCTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTGCAGGAGCTCATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTGCAGATGATGTGGATGGGGAGCGGGATGGCGCCGCCGGTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCGGGATGGGGGCGGCGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCC GCCGCCGA CCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCAC TTCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAACACAGGATCAGGATAATTA ACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACAGCAGGACGGAGCA GAGGAATTTGACA GGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCA GGAACTAGCTGTGATGTGCAGAAGATGTTA GCAAAATCTCTTGAAGATCTCTAACTGA TTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTA CCATTGGAATTAACA TTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAAATTGACACACTTCTT ]
[+] EMBL CB684590             [                             CTCCCCTTTGATCTGCTTCTGCTCTCTAGCTAGCCTTCTTCCTATTGGAAGCTTCTTCTCAAGTGAAAATTAAGAAGCTAGTATTGGCTGAGCTGAGCTGAGCACCCAGCCAAAGTCTTGGGCCTACTTAATTAGTGAGGTGAAGGGGAGATCGTCGTGTCGTCATCCATGGTTGCTGCCATCTGATGAGCGATGAACCAGTTCGTCCCTGATTGGAGCAACATGGGTGACGCATCCAGGACACTCGGCGAAGATGACAACCTCATTGAGCTGCTCTGGTGCAACGGCCATGTCGTCATGCAGAGCCAGAATCACCACCGGAAGCTGCCGCCGAGGCCGCCGGAGAAGGCGGCGGCGGCGGCGGTGCAAGAAGACGAGGCCGGCCTGTGGTTCCCGTTCGCGCTCGCCGACTCGCTGGAGAAGGACATCTTCTCGGACCTCTTCTACGAGGCGCCCGTCGCGGCGACGGCGGAGGCGGCGCCTGCTGGCCCGGGCGCGGGCGCCGACGGCGAAGGAAAGACTTGCAAGGGCGACGCGGCAATGGCGGAGGAGGAGCGTGGCGGGCCGGGCGCGGCGTCCGAGGCGCCGCGCGAGCTGATGCCGCCGCCCAAGTCGACGAACGCGTCCTGCTCGAGGCAGCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGCTCGTCCGGGCGAGGAGGTCGTCCGGCGGC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ]
[-] EMBL CB663226             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        acttgtACTAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTGCAGATGATGTGGATGGGGAGCGGGATGGCGCCGCCGGTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCGGGATGGGGGCGGCGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCC GCCGCCGA CCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCAC TTCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAACACAGGATCAGGATAATTA ACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACAGCAGGACGGAGCA GAGGAATTTGACA GGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCA GGAACTAGCTGTGATGTGCAGAAGATGTTA GCAAAATCTCTTGAAGATCTCTAACTGA TTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTA CCATTGGAATTAACA TTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAAATTGACACACTTCTTT]
[+] EMBL BM420514             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ACCACCTGCAGCCGGCCGCCGACCCCAGCATTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCACGTTCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCTACACAGGATCAGGATAATTATACCNAAAAGAGTGAGAGCCAAGAGGAAGAAAACATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACAGCAGGACGGAGCACGAGGAATTTGACACGGGGGACGGTTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCACGGAACTAGCTGTGATGTGCAGAAGATGTTACCCCAAATCTCTTGAAGATCTCTAACTGACTTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTACCCCTTGGAATTAACANTTAGAGACAGAAATTGTGCCATACATTTGGAACAAaaaaaaaa                       ]




>consensus_9113#0
CCCCCTTGCTCTGCCTCTGCCTCTTCTTCCTCCTCCTTGCTCTGCTTCTGCTCTCTAGCT
AGCCTTCTTCCTATTGGAAGCTTCTTCTCAAGTGAAAATTAAGAAGCTAGTATTGGCTGA
GCTGAGCTGAGCACCCAGCCAAAGTCTTGGGCCTACTTAATTAGTGAGGTGAAGGGGAGA
TCGTCGTGTCGTCATCCATGGTTGCTGCCATCTGATGAGCGATGAACCAGTTCGTCCCTG
ATTGGAGCAACATGGGTGACGCATCCAGGACACTCGGCGAAGATGACAACCTCATTGAGC
TGCTCTGGTGCAACGGCCATGTCGTCATGCAGAGCCAGAATCACCACCGGAAGCTGCCGC
CGAGGCCGCCGGAGAAGGCGGCGGCGGCGGCGGTGCAAGAAGACGAGGCCGGCCTGTGGT
TCCCGTTCGCGCTCGCCGACTCGCTGGAGAAGGACATCTTCTCGGACCTCTTCTACGAGG
CGCCCGTCGCGGCGACGGCGGAGGCGGCGCCTGCTGGCCCGGGCGCGGGCGCCGACGGCG
AAGGAAAGACTTGCAAGGGCGACGCGGCAATGGCGGAGGAGGAGCGTGGCGGGCCGGGCG
CGGCGTCCGAGGCGCCGCGCGAGCTGATGCCGCCGCCCAAGTCGACGAACGCGTCCTGCT
CGAGGCAGCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGC
TCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCG
GCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCA
ACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCT
CGGCGGTGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCGCGACCACGGCCACGGCCACG
AGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCA
CCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCG
AGGACTCCGAGAGCCCCAGCGAGGTAGGCGTCCTCCCGTCGAACACCAACAGAGACGCAC
ACTGACACTGACACCGGCGGCGCGTGGGATGCAATGCAGGACGCGGAGTCGGAGTCGGCG
GCGCTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAG
GTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTG
CAGGAGCTCATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAGGCGATC
GAGTACCTCAAGTCTCTGCAGCTGCAGCTGCAGATGATGTGGATGGGGAGCGGGATGGCG
CCGCCGGTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCGGGATGGGG
GCGGCGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCC
ACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCCGCCGCCGACCCAG
CTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAA
AATCCACCACTTCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAAC
ACAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGGT
TGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACAGCAGGACG
GAGCAGAGGAATTTGACAGGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCA
GGAACTAGCTGTGATGTGCAGAAGATGTTAGCAAAATCTCTTGAAGATCTCTAACTGATT
GTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTACCATT
GGAATTAACATTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAA
ATTGACACACTTCTTT

consensusID : consensus_9113#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 1377
fasta sequence

                              [GCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGCTCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCGGCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCAACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCTCGGCGTGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCCCGACCACGGCCACGGCCACGAGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCACCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCGAGGACTCCGAGAGCCCCAGCGAGGACGCGGAGTCGGAGTCGGCTGGTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTGCAGGAGCTCGAGCTCATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTCAGAGTGATGTGGATGGGGAGCGGGATGGCGCCGCCGCTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCCGGATTGGGGCGGNGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCCGCCGCCGACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCACTCCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAACACAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGCTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACACCAGGACGGAGCAGAGGAATTTGACAGGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCAGGAAGTAGCTGTGATGTGCAGAAGATGTTAGCAAAATCTCTTGAAGATCTCTAACTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTACCATTGGAATTAACATTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAAATTGACACACTTCTTTT]

[+] EMBL OSA487830            [GCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGCTCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCGGCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCAACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCTCGGCGTGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCCCGACCACGGCCACGGCCACGAGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCACCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCGAGGACTCCGAGAGCCCCAGCGAGGACGCGGAGTCGGAGTCGGCTGGTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTGCAGGAGCTCGAGCTCATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTCAGAGTGATGTGGATGGGGAGCGGGATGGCGCCGCCGCTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCCGGATTGGGGCGGNGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCCGCCGCCGACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCACTCCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAACACAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGCTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACACCAGGACGGAGCAGAGGAATTTGACAGGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCAGGAAGTAGCTGTGATGTGCAGAAGATGTTAGCAAAATCTCTTGAAGATCTCTAACTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTACCATTGGAATTAACATTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAAATTGACACACTTCTTTT]




>consensus_9113#1
GCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGCTCGTCCG
GGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCGGCGGCGG
CGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCAACCAGGT
GCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCTCGGCGTG
GGGAGCGCGAACGCCATCCCCTGCGGCGGGCCCGACCACGGCCACGGCCACGAGGCGACC
ACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCACCACGGAG
CCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCGAGGACTCC
GAGAGCCCCAGCGAGGACGCGGAGTCGGAGTCGGCTGGTGGCGCGCAAGCCGCCGGCGAA
GATGACGACGGCGCGGAGGAGCCGCGCCGCCGAGGTGCACAACCTCTCCGAGAGGAGGAG
ACGGGACAGGATCAACGAGAAGATGAGAGCCCTGCAGGAGCTCGAGCTCATACCACACTG
CAACAAGACTGACAAGGCGTCGATGCTGGACGAGGCGATCGAGTACCTCAAGTCTCTGCA
GCTGCAGCTCAGAGTGATGTGGATGGGGAGCGGGATGGCGCCGCCGCTGATGTTCCCGGG
GGTGCACCAGTATCTGCCGAGGATGGGCGTCCGGATTGGGGCGGNGGCGGCGGCGATGCC
GAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACACCGCCGGTGAACCACCT
TGACCTGGGCGTCAACCACCTGCAGCCGCCGCCGACCCAGCTTTATTTGCAGGGAGTGGG
GTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAGCAGCAAAATCCACCACTCCACGTGCC
AAATGGAAGCATTATGCCTCCTCCTGAAAATGCACCCAACACAGGATCAGGATAATTAAC
AAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATTCATGCTTGCATTGATCCTGAATGAGT
ATATATGGCAATAAAGGTAACTGAGCTGCACACCAGGACGGAGCAGAGGAATTTGACAGG
GGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGGAAGCCAGGAAGTAGCTGTGATGTGCA
GAAGATGTTAGCAAAATCTCTTGAAGATCTCTAACTGATTGTAATTAGGGGTATGATGGC
ATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGTACCATTGGAATTAACATTAGAGACAG
AAATTGTGCCATACATTTGGAACAAGAGTAGTTAGTATAAATTGACACACTTCTTTT

consensusID : consensus_9113#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 688
fasta sequence

                              [GATAATGTGGATGGGGAGCGGGATGGCCCCCCCGGTGATGTTCCCGGGGGTGCACCAGTATCTCCCGAGGATGGGCTTCGGAATGGGGGCGGCGGCGGCGGCAATCCCGAGGATCCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACCCCGCCGGTGAACCCCCTTGACTTGGGGGTCAACCACTTGCAGCCGCCGCCGACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGCCCGTGCAGCAGCAGCAAAATCCCCCACTTCACGTGCCAAATGGAAGCATTATCCCTCCTCCTGAAAATGCCCCCACCCCAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAACCATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAATTGAGCTGCCCACCAGGACGGAGCAGAGGAATTTGCCAGGGGGACGATTTTTTTAGCTTTTTCCCCTCTTTGGGAAGCCAGGAACTAGCTGTGATGTGCAGAAGATGTTAGCAAAATTTCTTGAAGATTTTTAACTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTTTGGTCTTTTGTCCCATTGGAATTACCATTAGAGACAGAAATTGAGGCATCCATTTGGACCAAAAAAAAAAAAAAAAA]

[-] EMBL CB684591             [GATAATGTGGATGGGGAGCGGGATGGCCCCCCCGGTGATGTTCCCGGGGGTGCACCAGTATCTCCCGAGGATGGGCTTCGGAATGGGGGCGGCGGCGGCGGCAATCCCGAGGATCCCGTTCATGGCGGCGCCGCAGCCGGTGGTGCCCACCCCGCCGGTGAACCCCCTTGACTTGGGGGTCAACCACTTGCAGCCGCCGCCGACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGCCCGTGCAGCAGCAGCAAAATCCCCCACTTCACGTGCCAAATGGAAGCATTATCCCTCCTCCTGAAAATGCCCCCACCCCAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAACCATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAATTGAGCTGCCCACCAGGACGGAGCAGAGGAATTTGCCAGGGGGACGATTTTTTTAGCTTTTTCCCCTCTTTGGGAAGCCAGGAACTAGCTGTGATGTGCAGAAGATGTTAGCAAAATTTCTTGAAGATTTTTAACTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTTTGGTCTTTTGTCCCATTGGAATTACCATTAGAGACAGAAATTGAGGCATCCATTTGGACCAAAAAAAAAAAAAAAAA]




>consensus_9113#2
GATAATGTGGATGGGGAGCGGGATGGCCCCCCCGGTGATGTTCCCGGGGGTGCACCAGTA
TCTCCCGAGGATGGGCTTCGGAATGGGGGCGGCGGCGGCGGCAATCCCGAGGATCCCGTT
CATGGCGGCGCCGCAGCCGGTGGTGCCCACCCCGCCGGTGAACCCCCTTGACTTGGGGGT
CAACCACTTGCAGCCGCCGCCGACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTT
GGGGGCCAAGCCCGTGCAGCAGCAGCAAAATCCCCCACTTCACGTGCCAAATGGAAGCAT
TATCCCTCCTCCTGAAAATGCCCCCACCCCAGGATCAGGATAATTAACAAAAAAGAGTGA
GAGCAAAGAGGAAGAAACCATTCATGGTTGCATTGATCCTGAATGAGTATATATGGCAAT
AAAGGTAATTGAGCTGCCCACCAGGACGGAGCAGAGGAATTTGCCAGGGGGACGATTTTT
TTAGCTTTTTCCCCTCTTTGGGAAGCCAGGAACTAGCTGTGATGTGCAGAAGATGTTAGC
AAAATTTCTTGAAGATTTTTAACTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCA
TAAGGCTGGTTTGGTCTTTTGTCCCATTGGAATTACCATTAGAGACAGAAATTGAGGCAT
CCATTTGGACCAAAAAAAAAAAAAAAAA

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9113#0      CCCCCTTGCTCTGCCTCTGCCTCTTCTTCCTCCTCCTTGCTCTGCTTCTGCTCTCTAGCT 60
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      AGCCTTCTTCCTATTGGAAGCTTCTTCTCAAGTGAAAATTAAGAAGCTAGTATTGGCTGA 120
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      GCTGAGCTGAGCACCCAGCCAAAGTCTTGGGCCTACTTAATTAGTGAGGTGAAGGGGAGA 180
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      TCGTCGTGTCGTCATCCATGGTTGCTGCCATCTGATGAGCGATGAACCAGTTCGTCCCTG 240
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      ATTGGAGCAACATGGGTGACGCATCCAGGACACTCGGCGAAGATGACAACCTCATTGAGC 300
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      TGCTCTGGTGCAACGGCCATGTCGTCATGCAGAGCCAGAATCACCACCGGAAGCTGCCGC 360
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CGAGGCCGCCGGAGAAGGCGGCGGCGGCGGCGGTGCAAGAAGACGAGGCCGGCCTGTGGT 420
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      TCCCGTTCGCGCTCGCCGACTCGCTGGAGAAGGACATCTTCTCGGACCTCTTCTACGAGG 480
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CGCCCGTCGCGGCGACGGCGGAGGCGGCGCCTGCTGGCCCGGGCGCGGGCGCCGACGGCG 540
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      AAGGAAAGACTTGCAAGGGCGACGCGGCAATGGCGGAGGAGGAGCGTGGCGGGCCGGGCG 600
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CGGCGTCCGAGGCGCCGCGCGAGCTGATGCCGCCGCCCAAGTCGACGAACGCGTCCTGCT 660
consensus_9113#1      ------------------------------------------------------------
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CGAGGCAGCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGC 720
consensus_9113#1      -------GCAGACGATGAGCCTGGCGGACGGCGGCGACAACGCCGGGGACCTGTCGGAGC 53
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      TCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCG 780
consensus_9113#1      TCGTCCGGGCGAGGAGGTCGTCCGGCGGCGCGGCTCGGCGGAAGGCGGAGGCCGGCGGCG 113
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      GCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCA 840
consensus_9113#1      GCGGCGGCGGCGCGTCGTCGTCGATGCTGAGCGCGATCGGGTCGAGCATCTGCGGGAGCA 173
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      ACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCT 900
consensus_9113#1      ACCAGGTGCAGGTGCAGCAGCGCACGGCGAGCGAGCCCGGGCGCCGCGGCGCGCCGCCCT 233
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CGGCGGTGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCGCGACCACGGCCACGGCCACG 960
consensus_9113#1      CGGCG-TGGGGAGCGCGAACGCCATCCCCTGCGGCGGGCCCGACCACGGCCACGGCCACG 292
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      AGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCA 1020
consensus_9113#1      AGGCGACCACCGTGGCGTCGTCGTCGGGGCGGTCCAACTGCTGCTTCGGCACCACCACCA 352
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCG 1080
consensus_9113#1      CCACGGAGCCGACGAGCACCAGCAACCGGAGCAGCAAGCGCAAGCGGCTCGACACCACCG 412
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      AGGACTCCGAGAGCCCCAGCGAGGTAGGCGTCCTCCCGTCGAACACCAACAGAGACGCAC 1140
consensus_9113#1      AGGACTCCGAGAGCCCCAGCGAGG------------------------------------ 436
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      ACTGACACTGACACCGGCGGCGCGTGGGATGCAATGCAGGACGCGGAGTCGGAGTCGGCG 1200
consensus_9113#1      ----------------------------------------ACGCGGAGTCGGAGTCGGC- 455
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      GCGCTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAG 1260
consensus_9113#1      -TGGTGGCGCGCAAGCCGCCGGCGAAGATGACGACGGCGCGGAGGAGCCGCGCCGCCGAG 514
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      GTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTG 1320
consensus_9113#1      GTGCACAACCTCTCCGAGAGGAGGAGACGGGACAGGATCAACGAGAAGATGAGAGCCCTG 574
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      CAGGAGCTC------ATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAG 1374
consensus_9113#1      CAGGAGCTCGAGCTCATACCACACTGCAACAAGACTGACAAGGCGTCGATGCTGGACGAG 634
consensus_9113#2      ------------------------------------------------------------
                                                                                  

consensus_9113#0      GCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTGCAGATGATGTGGATGGGGAGCGGG 1434
consensus_9113#1      GCGATCGAGTACCTCAAGTCTCTGCAGCTGCAGCTCAGAGTGATGTGGATGGGGAGCGGG 694
consensus_9113#2      --------------------------------------GATAATGTGGATGGGGAGCGGG 22
                                                              * ******************

consensus_9113#0      ATGGCGCCGCCGGTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCGGG 1494
consensus_9113#1      ATGGCGCCGCCGCTGATGTTCCCGGGGGTGCACCAGTATCTGCCGAGGATGGGCGTCCGG 754
consensus_9113#2      ATGGCCCCCCCGGTGATGTTCCCGGGGGTGCACCAGTATCTCCCGAGGATGGGCTTCGGA 82
                      ***** ** *** **************************** ************ ** * 

consensus_9113#0      ATGGGGGCGGCGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTG 1554
consensus_9113#1      ATTGGGGCGGNGGCGGCGGCGATGCCGAGGATGCCGTTCATGGCGGCGCCGCAGCCGGTG 814
consensus_9113#2      ATGGGGGCGGCGGCGGCGGCAATCCCGAGGATCCCGTTCATGGCGGCGCCGCAGCCGGTG 142
                      ** ******* ********* ** ******** ***************************

consensus_9113#0      GTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCCGCCGCCG 1614
consensus_9113#1      GTGCCCACACCGCCGGTGAACCACCTTGACCTGGGCGTCAACCACCTGCAGCCGCCGCCG 874
consensus_9113#2      GTGCCCACCCCGCCGGTGAACCCCCTTGACTTGGGGGTCAACCACTTGCAGCCGCCGCCG 202
                      ******** ************* ******* **** ********* **************

consensus_9113#0      ACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAG 1674
consensus_9113#1      ACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGGCCGTGCAGCAG 934
consensus_9113#2      ACCCAGCTTTATTTGCAGGGAGTGGGGTATTATCCGTTGGGGGCCAAGCCCGTGCAGCAG 262
                      ************************************************ ***********

consensus_9113#0      CAGCAAAATCCACCACTTCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCA 1734
consensus_9113#1      CAGCAAAATCCACCACTCCACGTGCCAAATGGAAGCATTATGCCTCCTCCTGAAAATGCA 994
consensus_9113#2      CAGCAAAATCCCCCACTTCACGTGCCAAATGGAAGCATTATCCCTCCTCCTGAAAATGCC 322
                      *********** ***** *********************** ***************** 

consensus_9113#0      CCCAACACAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATT 1794
consensus_9113#1      CCCAACACAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAAACATT 1054
consensus_9113#2      CCCACCCCAGGATCAGGATAATTAACAAAAAAGAGTGAGAGCAAAGAGGAAGAAACCATT 382
                      **** * ************************************************ ****

consensus_9113#0      CATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACAGC 1854
consensus_9113#1      CATGCTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAACTGAGCTGCACACC 1114
consensus_9113#2      CATGGTTGCATTGATCCTGAATGAGTATATATGGCAATAAAGGTAATTGAGCTGCCCACC 442
                      **** ***************************************** ******** ** *

consensus_9113#0      AGGACGGAGCAGAGGAATTTGACAGGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGG 1914
consensus_9113#1      AGGACGGAGCAGAGGAATTTGACAGGGGGACGATTTCTTTAGCTTTTTCCCCTCTTTGGG 1174
consensus_9113#2      AGGACGGAGCAGAGGAATTTGCCAGGGGGACGATTTTTTTAGCTTTTTCCCCTCTTTGGG 502
                      ********************* ************** ***********************

consensus_9113#0      AAGCCAGGAACTAGCTGTGATGTGCAGAAGATGTTAGCAAAATCTCTTGAAGATCTCTAA 1974
consensus_9113#1      AAGCCAGGAAGTAGCTGTGATGTGCAGAAGATGTTAGCAAAATCTCTTGAAGATCTCTAA 1234
consensus_9113#2      AAGCCAGGAACTAGCTGTGATGTGCAGAAGATGTTAGCAAAATTTCTTGAAGATTTTTAA 562
                      ********** ******************************** ********** * ***

consensus_9113#0      CTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGT 2034
consensus_9113#1      CTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTCTGGTCTTTTGT 1294
consensus_9113#2      CTGATTGTAATTAGGGGTATGATGGCATGTTCAAAGCATAAGGCTGGTTTGGTCTTTTGT 622
                      ************************************************ ***********

consensus_9113#0      ACCATTGGAATTAACATTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTA 2094
consensus_9113#1      ACCATTGGAATTAACATTAGAGACAGAAATTGTGCCATACATTTGGAACAAGAGTAGTTA 1354
consensus_9113#2      CCCATTGGAATTACCATTAGAGACAGAAATTGAGGCATCCATTTGGACCAAAAAAAAAAA 682
                       ************ ****************** * *** ******** *** *  *   *

consensus_9113#0      GTATAAATTGACACACTTCTTT- 2116
consensus_9113#1      GTATAAATTGACACACTTCTTTT 1377
consensus_9113#2      AAAAAA----------------- 688
                        * **