These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9124#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2461 fasta sequence [CAAAAAAGGTGAAGCTCTCTCCCTCCTCCACCTTTCCCCTCCCCCCTCCTCGCCTAGGGTTTCCCACCCCCACCATGCCTCACCCCCCCCGAACCCTAACCCTAACCCTAACCTAGCCTAGTGCGGCGACCATGGCGGCGGCGGGGGAGTACTCGTTCGCGGCGGAGTACGACGGCCCGCCGCTGCCCTACTCGCTGCCGCGCGCCATCCCGCTCGACCTGTCGCGGATCCCACTCGCCTCGCTCTCGTCCCCCACCTCGCCACCGCCACCCACGGCGCCGCCGCTCCCCGTCGTGCGCCCCCTCACGCCCTCCTCCCTCTGCTCCGCCGAGTCAAAGCGGGATTCGCTGGGGAGAGGCTCACGTGTGCTGCGGCGGCTGCTCAGCGCCACGGAGGTGGAGCTTGTCATGAGGAGCGAGCGGGAATGCGCCGCCAACCAGCTGCGACCGGAGGACGTGTATGTGAATGGCACCAAGCTGTCGCCGGAGGAGCTCGTCATGCTGCAGGGGTGCCAGTGCCCTCCTTCTAAGCTCCGGCCGGGGTTCTATTGGTACGACAAGGTTTCCGGCTTCTGGGGAAAGGAGGGTCACAAGCCCCATTGCATAATAAGCCCAAATCTAAATGTTGGAGGCGCTCTAGATCAAAAGGCCAGCAACGGGAACACTGGGATCTTGATAAACGGCCGCGAGATTACGAAATCTGAGCTGCAAATGCTTAAGTTGGCAGGAGTTCAATGTGCTGGAAAACCTCACTTTTGGGTGAATGCTGATGGGACTTACCAAGAGGAAGGACAAAAAACAGTTAAAGGCAAGATTT-GGGATAAGCCTATTGTGAAGCTGCTTAGTCCTGTCCTATCACTGCCAACGCCTAACAAAGCAAATAATCAATGCGGTGAAGAGCCAGTGAATGTGGTAAATCGACCCATCCCTGACTACTTGGAGCAAAGGACCATTCAGAAGCTCCTGTTGGTTGGATCAGGGACAAACACCATACTCAAGCAGGCCAAGTTCTTGTACAAGAGCAGACCATTTTCTGTAGAGGAGTGTGAAGATCTCAGACTTATCATACAAAGTAACATATACAACTACCTTGGTATACTACTTGAAGGGCGTGAAAGATTTGAAGAGGAAGCTATAGCTGACAGAAGAACTACCTGCCAAAGTGATCCTTCTAGCTCTGGCCATTGTGAACCAGAGCTTTGTAATGACATTACTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGATTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTCAAGCTACATATAACCGGAGAAGTGAACTGCCATTCCTTCCATCTGCTGCTAGTTATTTCCTTGACAAGGCTGTTGATATTTCCCGAACGGAATATGAGCTCTCTGATATGGATATCCTTTACGCTGATGGGATAACATCCTCAGATGGGTTAGCATCTACAGATTTCTCCTTCCCACAACTGGCTTTGGACGGGCGGGGTTTTGATGAGCCAGATCCACAAGACACTTTGCTAAGGTACCAACTAATAAGAATAAACAACAAAGGATTGCATGAGAACTGTAAATGGCTGCAAATGTTCGATGATGTGAGGCTTGTTATCTTCTGTGTTGCGGTCAGCGACTATGATGAGTACTACGAGGATGCAAACGGCAATGTTGTGAACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCAAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTCTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGACCCCTCCTCCCTCAACAACATTTGCTTTTGAGGTGTAAATAGCTGTGAATGCATTTGCTCTCCCAGCAACCTTTTTTCCTTTTAGAGTTTTCTCATTTTTTCCCCTTTTGTTGCCTAGCAAGATCATCGGCTTGTATGGTTGTTTAGTTGTTTACAAGTAGGGTGAGATGCAAGAGGTCTGCCTGATTCTGATTCTTGTATGTATGGAATTATAATCTTTAAATTAACATGGTGCTGATTCTTGTACTTCAAAAAAAAACAAAAAAGGG] [+] EMBL AK067863 [CAAAAAAGGTGAAGCTCTCTCCCTCCTCCACCTTTCCCCTCCCCCCTCCTCGCCTAGGGTTTCCCACCCCCACCATGCCTCACCCCCCCCGAACCCTAACCCTAACCCTAACCTAGCCTAGTGCGGCGACCATGGCGGCGGCGGGGGAGTACTCGTTCGCGGCGGAGTACGACGGCCCGCCGCTGCCCTACTCGCTGCCGCGCGCCATCCCGCTCGACCTGTCGCGGATCCCACTCGCCTCGCTCTCGTCCCCCACCTCGCCACCGCCACCCACGGCGCCGCCGCTCCCCGTCGTGCGCCCCCTCACGCCCTCCTCCCTCTGCTCCGCCGAGTCAAAGCGGGATTCGCTGGGGAGAGGCTCACGTGTGCTGCGGCGGCTGCTCAGCGCCACGGAGGTGGAGCTTGTCATGAGGAGCGAGCGGGAATGCGCCGCCAACCAGCTGCGACCGGAGGACGTGTATGTGAATGGCACCAAGCTGTCGCCGGAGGAGCTCGTCATGCTGCAGGGGTGCCAGTGCCCTCCTTCTAAGCTCCGGCCGGGGTTCTATTGGTACGACAAGGTTTCCGGCTTCTGGGGAAAGGAGGGTCACAAGCCCCATTGCATAATAAGCCCAAATCTAAATGTTGGAGGCGCTCTAGATCAAAAGGCCAGCAACGGGAACACTGGGATCTTGATAAACGGCCGCGAGATTACGAAATCTGAGCTGCAAATGCTTAAGTTGGCAGGAGTTCAATGTGCTGGAAAACCTCACTTTTGGGTGAATGCTGATGGGACTTACCAAGAGGAAGGACAAAAAACAGTTAAAGGCAAGATTT GGGATAAGCCTATTGTGAAGCTGCTTAGTCCTGTCCTATCACTGCCAACGCCTAACAAAGCAAATAATCAATGCGGTGAAGAGCCAGTGAATGTGGTAAATCGACCCATCCCTGACTACTTGGAGCAAAGGACCATTCAGAAGCTCCTGTTGGTTGGATCAGGGACAAACACCATACTCAAGCAGGCCAAGTTCTTGTACAAGAGCAGACCATTTTCTGTAGAGGAGTGTGAAGATCTCAGACTTATCATACAAAGTAACATATACAACTACCTTGGTATACTACTTGAAGGGCGTGAAAGATTTGAAGAGGAAGCTATAGCTGACAGAAGAACTACCTGCCAAAGTGATCCTTCTAGCTCTGGCCATTGTGAACCAGAGCTTTGTAATGACATTACTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGGTTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTCAAGCTACATATAACCGGAGAAGTGAACTGCCATTCCTTCCATCTGCTGCTAGTTATTTCCTTGACAAGGCTGTTGATATTTCCCGAACGGAATATGAGCTCTCTGATATGGATATCCTTTACGCTGATGGGATAACATCCTCAGATGGGTTAGCATCTACAGATTTCTCCTTCCCACAACTGGCTTTGGACGGGCGGGGTTTTGATGAGCCAGATCCACAAGACACTTTGCTAAGGTACCAACTAATAAGAATAAACAACAAAGGATTGCATGAGAACTGTAAATGGCTGCAAATGTTCGATGATGTGAGGCTTGTTATCTTCTGTGTTGCGGTCAGCGACTATGATGAGTACTACGAGGATGCAAACGGCAATGTTGTGAACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCGAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTCTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGACCCCTCCTCCCTCAACAACATTTGCTTTTGAGGTGTAAATAGCTGTGAATGCATTTGCTCTCCCAGCAACCTTTTTTCCTTTTAGAGTTTTCTCATTTTTTCCCCTTTTGTTGCCTAGCAAGATCATCGGCTTGTATGGTTGTTTAGTTGTTTACAAGTAGGGTGAGATGCAAGAGGTCTGCCTGATTCTGATTCTTGTATGTATGGAATTATAATCTTTAAATTAACATGGTGC ] [+] EMBL CB652248 [ CCCCCTTGCATAATAAGCCCAAATCTAAATGTTGGAGGCGCTCTAGATCAAAAGGCCAGCAACGGGAACACTGGGATCTTGATAAACGGCCGCGAGATTACGAAATCTGAGCTGCAAATGCTTAAGTTGGCAGGAGTTCAATGTGCTGGAAAACCTCACTTTTGGGTGAATGCTGATGGGACTTACCAAGAGGAAGGACAAAAAACAGTTAAAGGCAAGATTT GGGATAAGCCTATTGTGAAGCTGCTTAGTCCTGTCCTATCACTGCCAACGCCTAACAAAGCAAATAATCAATGCGGTGAAGAGCCAGTGAATGTGGTAAATCGACCCATCCCTGACTACTTGGAGCAAAGGACCATTCAGAAGCTCCTGTTGGTTGGATCAGGGACAAACACCATACTCAAGCAGGCCAAGTTCTTGTACAAGAGCAGACCATTTTCTGTAGAGGAGTGTGAAGATCTCAGACTTATCATACAAAGTAACATATACAACTACCTTGGTATACTACTTGAAGGGCGTGAAAGATTTGAAGAGGAAGCTATAGCTGACAGAAGAACTACCTGCCAAAGTGATCCTTCTAGCTCTGGCCATTGTGAACCAGAGCTTTGTAATGACATTACTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGATTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTNCAGCTACATATAACCGGAGAAGTGAACTGCCATTCCT ] [+] EMBL CB683542 [ CCGCCATATTACGAAATCTGAGCTGCAAATGCTTAAGTTGGCAGGAGTTCAATGTGCTGGAAAACCTCACTTTTGGGTGAATGCTGATGGGACTTACCAAGAGGAAGGACAAAAAACAGTTAAAGGCAAGATTTAGGGATAAGCCTATTGTGAAGCTGCTTAGTCCTGTCCTATCACTGCCAACGCCTAACAAAGCAAATAATCAATGCGGTGAAGAGCCAGTGAATGTGGTAAATCGACCCATCCCTGACTACTTGGAGCAAAGGACCATTCAGAAGCTCCTGTTGGTTGGATCAGGGACAAACACCATACTCAAGCACGCCAAGTTCTTGTACAAGAGCAGACCATTTTCTGTAGAGGAGTGTGAAGATCTCAGACTTATCATACAAAGTAACATATACAACTACCTTGGTATACTACTTGAAGGGCGTGAAAGATTTGAAGAGGAAGCTATAGCTGACAGAAGAACTACCTGCCAAAGTGATCCTTCTAGCTCTGGCCATTGTGAACCAGAGCTTTGTAATGACATTACTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGATTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTCAAGCTACATATAACCGGAGAAGTGAACTGCCATTCCTTCCATCTGCTGCTAGTTATTTCCTTGACCAAGCTGTTGATATTTCCCAAAC ] [+] EMBL AK060570 [ CTGAGTACTATATTGCTCCACGCCTGAAAGCATTCTCTGATTGGATTCTAAAAGCTATGGCCATAGGTAATCTTGAAGACATTTTCCCTGCAGCTAGTCGTGAATATGCACCAATGGTTGAGGAACTATGGAAAGATCCTGCTATTCAAGCTACATATAACCGGAGAAGTGAACTGCCATTCCTTCCATCTGCTGCTAGTTATTTCCTTGACAAGGCTGTTGATATTTCCCGAACGGAATATGAGCTCTCTGATATGGATATCCTTTACGCTGATGGGATAACATCCTCAGATGGGTTAGCATCTACAGATTTCTCCTTCCCACAACTGGCTTTGGACGGGCGGGGTTTTGATGAGCCAGATCCACAAGACACTTTGCTAAGGTACCAACTAATAAGAATAAACAACAAAGGATTGCATGAGAACTGTAAATGGCTGCAAATGTTCGATGATGTGAGGCTTGTTATCTTCTGTGTTGCGGTCAGCGACTATGATGAGTACTACGAGGATGCAAACGGCAATGTTGTGAACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCAAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTCTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGACCCCTCCTCCCTCAACAACATTTGCTTTTGAGGTGTAAATAGCTGTGAATGCATTTGCTCTCCCAGCAACCTTTTTTCCTTTTAGAGTTTTCTCATTTTTTCCCCTTTTGTTGCCTAGCAAGATCATCGGCTTGTATGGTTGTTTAGTTGTTTACAAGTAGGGTGAGATGCAAGAGGTCTGCCTGATTCTGATTCTTGTATGTATGGAATTATAATCTTTAAATTAACATGGTGCTGATT ] [-] EMBL CB652249 [ CTGCAAATGTTCGATGATGTGAGGCTTGTTATCTTCTGTGTTGCGGTCAGCGACTATGATGAGTACTACGAGGATGCAAACGGCAATGTTGTGAACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCAAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTCTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGACCCCTCCTCCCTCAACAACATTTGCTTTTGAGGTGTAAATAGCTGTGAATGCATTTGCTCTCCCAGCAACCTTTTTTCCTTTTAGAGTTTTCTCATTTTTTCCCCTTTTGTTGCCTAGCAAGATCATCGGCTTGTATGGTTGTTTAGTTGTTTACAAGTAGGGTGAGATGCAAGAGGTCTGCCTGATTCTGATTCTTGTATGTATGGAAGGATAATCTTTAAATTAACATGGTGCTGATTCT ] [-] EMBL CB683122 [ AACAAGATGATGGAGACCAGGCAGCTATTTGAGAGCATTGCCCTTCATCCGATATTTGAGCAGATGGATTTCCTTCTACTTCTCACCAAGTTTGATATCCTAGAGCAGAAGATCGGCAAATCTCCTTTAACATCATGCGACTGGTTCAGCGACTTCACTCCCCTGGTAAGCCGCAATCTGATCAACGGCACCAGCAAAAGCTCGCGGGGCAGCTCCACTGGCTCGACATTGGCGCAGATGGCGGGTCACTACATTGCGGTGAAGTTCAAGAGCGTATTCCAGTCGTTCACGGAGCGGAAACTTTACGTGTCCTACGTGAACGCCCTGGACCAGGAGTCGGTCCGCTCCGCGATCCGCTATGGAAGGGAGATCATCAAGTGGGAAGACGAGAAGCCCGTGTTTGGGTCCAGCGAGACGACATACAGCGAGGAGCCGAGCTCCTACTCTCACTGACCCCTCCTCCCTCAACAACATTTGCTTTTGAGGTGTAAATAGCTGTGAATGCATTTGCTCTCCCAGCAACCTTTTTTCCTTTTAGAGTTTTCTCATTTTTTCCCCTTTTGTTGCCTAGCAAGATCATCGGCTTGTATGGTTGTTTAGTTGTTTCCAAGTAGGGTGAGATGCAAGAGGTCTGCCTGATTCTGATTCTTGTATGTATGGAATTATAATCTTTAAATTAACATGGTGCTGATTCTTGTACTTCAAAAAAAAACAAAAAAGGG] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||