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Oryza sativa
cluster # 9139 cluster # 9139       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9139#0 length = 1411 sequences # 3  
consensus_9139#1 length = 1097 sequences # 2  
consensus_9139#2 length = 442 sequences # 1  

consensusID : consensus_9139#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 1411
fasta sequence
                              [TTCCTCGAGCACTGTTGGCCTACTGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACAGCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTCACCCGCCTCGGCGAGGCCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGCGCGCACCAGCGCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCTCGGAAGCAAATTGGCATGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAAGCAGTGGATAAACACTTGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGCGCGCTGAGGGAATGCAACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTTGCTTCTAGAGCGGAAGCTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCTTTTGGAAGGTTTGATAGTGCGATGTCATCAATGGAGAAAGCTAGGAAAATAGATTCTGGAAACGTTGAAGTGATGGCCATGCATAAGAGTGTGAGAACTGTTGCCCAAGCACGAACCTTAGGGAATGAACTTTTTCATTCTGGAAAATTTGCAGAAGCTTTCCTAGCATACGGCGAAGGGCTCAAGCATCACCCTGCAAATTCAGTCCTCTACTGCAATAGGGCTGCTTGCATGTTCAAGTTAGGGCAATGGGAGAAGTCTATTGAGGACTGCAATGAAGCCCTTAAGATTCAACCCAACTATTGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGGCATTTCCATGCCCTTGTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAGAGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACAACCTTGCCAGGCACAATATTATTGAAGATCTTCCCATTTCATTGTTTCCATGTGCACCATGCTGCAAAACCACAATCCAGACCATGGACCAATGAAGTCATAGGACAGCAGGTATGTTAGATTTTATAGCAAACTTTAACAATTAATAGAGTATTACATTTTTGCAGGTGTTTCTGTTGTTCATTTCATGGCACCTTTAAATCAGCAATGCTCTGATATCGCCCCATTTGTGGATGCACTGTGTACCAGATATCCATCTGTTAATTTCCTCAAGGTGGATATAACTGAGAACCCCACAG]

[+] EMBL AK104996             [TTCCTCGAGCACTGTTGGCCTACTGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACAGCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTCACCCGCCTCGGCGAGGCCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGCGCGCACCAGCGCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCTCGGAAGCAAATTGGCATGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAAGCAGTGGATAAACACTTGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGCGCGCTGAGGGAATGCAACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTTGCTTCTAGAGCGGAAGCTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCTTTTGGAAGGTTTGATAGTGCGATGTCATCAATGGAGAAAGCTAGGAAAATAGATTCTGGAAACGTTGAAGTGATGGCCATGCATAAGAGTGTGAGAACTGTTGCCCAAGCACGAACCTTAGGGAATGAACTTTTTCATTCTGGAAAATTTGCAGAAGCTTTCCTAGCATACGGCGAAGGGCTCAAGCATCACCCTGCAAATTCAGTCCTCTACTGCAATAGGGCTGCTTGCATGTTCAAGTTAGGGCAATGGGAGAAGTCTATTGAGGACTGCAATGAAGCCCTTAAGATTCAACCCAACTATTGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGGCATTTCCATGCCCTTGTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAGAGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACAACCTTGCCAGGCACAATATTATTGAAGATCTTCCCATTTCATTGTTTCCATGTGCACCATGCTGCAAAACCACAATCCAGACCATGGACCAATGAAGTCATAGGACAGCAGGTATGTTAGATTTTATAGCAAACTTTAACAATTAATAGAGTATTACATTTTTGCAGGTGTTTCTGTTGTTCATTTCATGGCACCTTTAAATCAGCAATGCTCTGATATCGCCCCATTTGTGGATGCACTGTGTACCAGATATCCATCTGTTAATTTCCTCAAGGTGGATATAACTGAGAACCCCACAG]
[+] EMBL CF323324             [                                                                                                                                                                                                                                                                                                                                                                                                                                            CAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCTTTTGGAAGGTTTGATAGTGCGATGTCATCAATGGAGAAAGCTAGGAAAATAGATTCTGGAAACGTTGAAGTGATGGCCATGCATAAGAGTGTGAGAACTGTTGCCCAAGCACGAACCTTAGGGAATGAACTTTTTCATTCTGGAAAATTTGCAGAAGCTTTCCTAGCATACGGCGAAGGGCTCAAGCATCACCCTGCAAATTCAGTCCTCTACTGCAATAGGGCTGCTTGCATGTTCAAGTTAGGGCAATGGGAGAAGTCTATTGAGGACTGCAATGAAGCCCTTAAGATTCAACCCAACTATTGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTG                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[+] EMBL CB000978             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AATAGATTCTGGAAACGTTGAAGTGATGGCCATGCATAAGAGTGTGAGAACTGTTGCCCAAGCACGAACCTTAGGGAATGAACTTTTTCATTCTGGAAAATTTGCAGAAGCTTTCCTAGCATACGGCGAAGGGCTCAAGCATCACCCTGCAAATTCAGTCCTCTACTGCAATAGGGCTGCTTGCATGTTCAAGTTAGGGCAATGGGAGAAGTCTATTGAGGACTGCAATGAAGCCCTTAAGATTCAACCCAACTATTGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGGCATTTCCATGCC                                                                                                                                                                                                                                                                                                                                                                                                                 ]


>consensus_9139#0 TTCCTCGAGCACTGTTGGCCTACTGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACA GCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTCACCCGCCTCGGCGAGG CCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGCGCGCACCAGC GCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCTCGGAAGCAAATTGGCA TGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAAGCAGTGGATAAACACT TGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGCGCGCTGAGGGAATGCA ACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTTGCTTCTAGAGCGGAAG CTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGC TTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCAT ATCTCTACTATGTACATGCCCAAGTTGACATAGCTTTTGGAAGGTTTGATAGTGCGATGT CATCAATGGAGAAAGCTAGGAAAATAGATTCTGGAAACGTTGAAGTGATGGCCATGCATA AGAGTGTGAGAACTGTTGCCCAAGCACGAACCTTAGGGAATGAACTTTTTCATTCTGGAA AATTTGCAGAAGCTTTCCTAGCATACGGCGAAGGGCTCAAGCATCACCCTGCAAATTCAG TCCTCTACTGCAATAGGGCTGCTTGCATGTTCAAGTTAGGGCAATGGGAGAAGTCTATTG AGGACTGCAATGAAGCCCTTAAGATTCAACCCAACTATTGGAAGGCTCTCCTAAGGCGTG CAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTA GGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGGCATTTCCATGCCCTTGTTGCTC TTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAGAGGTTGAAGCAC TTGTAGGAGCAGAACAATTCCAGATGGCTACAACCTTGCCAGGCACAATATTATTGAAGA TCTTCCCATTTCATTGTTTCCATGTGCACCATGCTGCAAAACCACAATCCAGACCATGGA CCAATGAAGTCATAGGACAGCAGGTATGTTAGATTTTATAGCAAACTTTAACAATTAATA GAGTATTACATTTTTGCAGGTGTTTCTGTTGTTCATTTCATGGCACCTTTAAATCAGCAA TGCTCTGATATCGCCCCATTTGTGGATGCACTGTGTACCAGATATCCATCTGTTAATTTC CTCAAGGTGGATATAACTGAGAACCCCACAG



consensusID : consensus_9139#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1097
fasta sequence
                              [GACTCGCTCCCGCCGGGCCGCCTCTCCCCCGTCTCCCCCCTCGTCCACTCCAGGCTCCCCACTCCCACCTCCTCCTCCGGCTCCTCCGGCTCCGCTCCGCCGAGGCCCGCGCGGCGTGGTGGTGGTGACTACCACGGCGTCGGCGAGGGGTTCGGCCCGCTCATCTACACGTCGTGCTCGTCGAGCGCGGGTGGTGGTGGCGGCGGCGTCGGCGCGAGCACGGCCACCTCGGCGCTCGCCGCCGGCGCGTTCCCCGCGGGGAACATCTGCCCCTCCGGCCGCCTCCCCACCACGCCGCCGGTTCCGCCTCCCCGTGCCGCCCGCCGCGACGTGCTTGGCTCCGGCACCGGCAACTACGGCCACGGAAGCGTCGTCCGCGCGCGATGTGCCGCTCCAGTCTCCTCCTCCGAGGACCACGCGTCGGCGGTCAAGATGTCCGCGGCGGCGAGCGCCGAGGCGGAGGAGGTTANGCGCGCCGGGAACGAGCAGTACAAGAACGGGTGCTTCGAGGAAGCGCTGCGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACAGCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTCACCCGCCTCGGCGAGGCCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGCGCGCACCAGCGCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCTCGGAAGCAAATTGGCATGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAAGCAGTGGATAAACACTTGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGCGCGCTGAGGGAATGCAACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTTGCTTCTAGAGCGGAAGCTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCNTTTGGAAGGTTTGATAGTGCGATGTC]

[+] EMBL CB636940             [GACTCGCTCCCGCCGGGCCGCCTCTCCCCCGTCTCCCCCCTCGTCCACTCCAGGCTCCCCACTCCCACCTCCTCCTCCGGCTCCTCCGGCTCCGCTCCGCCGAGGCCCGCGCGGCGTGGTGGTGGTGACTACCACGGCGTCGGCGAGGGGTTCGGCCCGCTCATCTACACGTCGTGCTCGTCGAGCGCGGGTGGTGGTGGCGGCGGCGTCGGCGCGAGCACGGCCACCTCGGCGCTCGCCGCCGGCGCGTTCCCCGCGGGGAACATCTGCCCCTCCGGCCGCCTCCCCACCACGCCGCCGGTTCCGCCTCCCCGTGCCGCCCGCCGCGACGTGCTTGGCTCCGGCACCGGCAACTACGGCCACGGAAGCGTCGTCCGCGCGCGATGTGCCGCTCCAGTCTCCTCCTCCGAGGACCACGCGTCGGCGGTCAAGATGTCCGCGGCGGCGAGCGCCGAGGCGGAGGAGGTTANGCGCGCCGGGAACGAGCAGTACAAGAACGGGTGCTTCGAGGAAGCGCTGCGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB636595             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     GCAGTACAAGAACGGGTGCTTCGAGGAGGCGCTGCGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACAGCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTCACCCGCCTCGGCGAGGCCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGCGCGCACCAGCGCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCTCGGAAGCAAATTGGCATGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAAGCAGTGGATAAACACTTGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGCGCGCTGAGGGAATGCAACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTTGCTTCTAGAGCGGAAGCTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCNTTTGGAAGGTTTGATAGTGCGATGTC]


>consensus_9139#1 GACTCGCTCCCGCCGGGCCGCCTCTCCCCCGTCTCCCCCCTCGTCCACTCCAGGCTCCCC ACTCCCACCTCCTCCTCCGGCTCCTCCGGCTCCGCTCCGCCGAGGCCCGCGCGGCGTGGT GGTGGTGACTACCACGGCGTCGGCGAGGGGTTCGGCCCGCTCATCTACACGTCGTGCTCG TCGAGCGCGGGTGGTGGTGGCGGCGGCGTCGGCGCGAGCACGGCCACCTCGGCGCTCGCC GCCGGCGCGTTCCCCGCGGGGAACATCTGCCCCTCCGGCCGCCTCCCCACCACGCCGCCG GTTCCGCCTCCCCGTGCCGCCCGCCGCGACGTGCTTGGCTCCGGCACCGGCAACTACGGC CACGGAAGCGTCGTCCGCGCGCGATGTGCCGCTCCAGTCTCCTCCTCCGAGGACCACGCG TCGGCGGTCAAGATGTCCGCGGCGGCGAGCGCCGAGGCGGAGGAGGTTANGCGCGCCGGG AACGAGCAGTACAAGAACGGGTGCTTCGAGGAAGCGCTGCGGCTGTACGACCGCGCGCTC GCGCTGTGCCCCGACAGCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTC ACCCGCCTCGGCGAGGCCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTAC GGCCGCGCGCACCAGCGCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCT CGGAAGCAAATTGGCATGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAA GCAGTGGATAAACACTTGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGC GCGCTGAGGGAATGCAACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTT GCTTCTAGAGCGGAAGCTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATC TCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGA TTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCNTTTGGAAGG TTTGATAGTGCGATGTC



consensusID : consensus_9139#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 442
fasta sequence
                              [TGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGGCATTTCCATGCCCTTNTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAGAGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACANCCTTGCCAGGTGTTTCTGTTGTTCATTTCATGGCACCTTTAAATCAGCANTGCTCTGATATCGNCCCATTTGTGGATGCACTGTGTACCAGATATCCATCTGTTAATTTCCTCAAGGTGGATATAACTNAGAACCCCACAGTGACACAATTAGGAAAATTTCAAGGACAGTTCCAACCCTCAAAAATTTACAAGGTTGGGACACGNG]

[+] EMBL C28730               [TGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGGCATTTCCATGCCCTTNTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAGAGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACANCCTTGCCAGGTGTTTCTGTTGTTCATTTCATGGCACCTTTAAATCAGCANTGCTCTGATATCGNCCCATTTGTGGATGCACTGTGTACCAGATATCCATCTGTTAATTTCCTCAAGGTGGATATAACTNAGAACCCCACAGTGACACAATTAGGAAAATTTCAAGGACAGTTCCAACCCTCAAAAATTTACAAGGTTGGGACACGNG]


>consensus_9139#2 TGGAAGGCTCTCCTAAGGCGTGCAGCTTCCTATGGCAAGATTGAACAATGGGCAGATTCC GTGAAAGATTATGAGGTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAGGGG CATTTCCATGCCCTTNTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAG TTTGGAGGAGAGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACANCCTTG CCAGGTGTTTCTGTTGTTCATTTCATGGCACCTTTAAATCAGCANTGCTCTGATATCGNC CCATTTGTGGATGCACTGTGTACCAGATATCCATCTGTTAATTTCCTCAAGGTGGATATA ACTNAGAACCCCACAGTGACACAATTAGGAAAATTTCAAGGACAGTTCCAACCCTCAAAA ATTTACAAGGTTGGGACACGNG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9139#0      TTCCTCGAGCACTGTTGGCCTACTGGCTGTACGACCGCGCGCTCGCGCTGTGCCCCGACA 60
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      GCGCCGCGTGCCGTGCCAACCGCGCCGCGGCGCTCATCGGGCTCACCCGCCTCGGCGAGG 120
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      CCGTCGAGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGCGCGCACCAGC 180
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      GCCTCGCGTCGCTGCAAATAAGGCTTGGGCGCACTGCTGATGCTCGGAAGCAAATTGGCA 240
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      TGGGTGGCCTGCAGCCGGACATTGTAGAGTTGCACAAATTAGAAGCAGTGGATAAACACT 300
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      TGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAAGCGCGCTGAGGGAATGCA 360
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      ACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCTTTGCTTCTAGAGCGGAAG 420
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ------------------------------------------------------------
                                                                                  

consensus_9139#0      CTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAATCTCTAGAGCATCCAAGC 480
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      ----------------------------------------------------GACTCGCT 8
                                                                                  

consensus_9139#0      TTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTGGATTTCAGTCCAACTCAT 540
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      CCCGCCGGGCCGCCTCTCCCCCGTCTCCCCCCTCGTCCACTCCAGGCTCCCCACTCCCAC 68
                                                                                  

consensus_9139#0      ATCTCTACTATGTACATGCCCAAGTTGACATAGCTTTTGGAAGGTTTGATAGTGCGATGT 600
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      CTCCTCCTCCGGCTCCTCCGGCTCCGCTCCGCCGAGGCCCGCGCGGCGTGGTGGTGGTGA 128
                                                                                  

consensus_9139#0      CATCAATGGAGAAAGCTAGGAAAATAGATTCTGGAAACGTTGAAGTGATGGCCATGCATA 660
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      CTACCACGGCGTCGGCGAGGGGTTCGGCCCGCTCATCTACACGTCGTGCTCGTCGAGCGC 188
                                                                                  

consensus_9139#0      AGAGTGTGAGAACTGTTGCCCAAGCACGAACCTTAGGGAATGAACTTTTTCATTCTGGAA 720
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      GGGTGGTGGTGGCGGCGGCGTCGGCGCGAGCACGGCCACCTCGGCGCTCGCCGCCGGCGC 248
                                                                                  

consensus_9139#0      AATTTGCAGAAGCTTTCCTAGCATACGGCGAAGGGCTCAAGCATCACCCTGCAAATTCAG 780
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      GTTCCCCGCGGGGAACATCTGCCCCTCCGGCCGCCTCCCCACCACGCCGCCGGTTCCGCC 308
                                                                                  

consensus_9139#0      TCCTCTACTGCAATAGGGCTGCTTGCATGTTCAAGTTAGGGCAATGGGAGAAGTCTATTG 840
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      TCCCCGTGCCGCCCGCCGCGACGTGCTTGGCTCCGGCACCGGCAACTACGGCCACGGAAG 368
                                                                                  

consensus_9139#0      AGGACTGCAATGAAGCCCTTAAGATTCAACCCAACTATTGGAAGGCTCTCCTAAGGCGTG 900
consensus_9139#2      --------------------------------------TGGAAGGCTCTCCTAAGGCGTG 22
consensus_9139#1      CGTCGTCCGCGCGCGATGTGCCGCTCCAGTCTCCTCCTCCGAGGACCACGCGTCGGCGGT 428
                                                              ** * *    *   ****  

consensus_9139#0      CA----GCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAA---AGATTATGAG 953
consensus_9139#2      CA----GCTTCCTATGGCAAGATTGAACAATGGGCAGATTCCGTGAA---AGATTATGAG 75
consensus_9139#1      CAAGATGTCCGCGGCGGCGAGCGCCGAGGCGGAGGAGGTTANGCGCGCCGGGAACGAGCA 488
                      **    *    *   *** **     *    * * ** **  * *      **    *  

consensus_9139#0      GTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAG--GGGCATTT---CCATG 1008
consensus_9139#2      GTTCTTAGGAGGGAACTTCCTGGTGACACTGAGGTAGCAGAG--GGGCATTT---CCATG 130
consensus_9139#1      GTACAAGAACGGGTGCTTCGAGGAAGCGCTGCGGCTGTACGACCGCGCGCTCGCGCTGTG 548
                      ** *      ***  ****  **   * *** **  * *     * **  *    *  **

consensus_9139#0      CCCTTGTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAG 1068
consensus_9139#2      CCCTTNTTGCTCTTAGGTCATCACGAGGTGAGGATGTATCCAATATGAAGTTTGGAGGAG 190
consensus_9139#1      CCCCGACAGCGCCGCGTGCCGTGCCAACCGCGC-CGCGGCGCTCATCGGGCTCACCCGCC 607
                      ***     ** *   *  *    * *   * *   *   *    **   * *     *  

consensus_9139#0      AGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACAACCTTGCCA-GGCACA 1127
consensus_9139#2      AGGTTGAAGCACTTGTAGGAGCAGAACAATTCCAGATGGCTACANCCTTGCCA-GG---- 245
consensus_9139#1      TCGGCGAGGCCGTCG-AGGAGTGCGAGGAGGCCATCCGGCTCGATCCGTCCTACGGCCGC 666
                        *  ** **  * * *****    *  *  ***   ****  * ** * * * **    

consensus_9139#0      ATATTATTGAAGATCTTCCCATTTCATTGTTTCCATGTGCACCATGCTGCAAAA-CCACA 1186
consensus_9139#2      -TGTTTCTGTTGTTCATTTCATGGCACC-TTTAAATCAGCA--NTGCTCTGATA-TCG-- 298
consensus_9139#1      GCGCACCAGCGCCTCGCGTCGCTGCAAA--TAAGGCTTGGGCGCACTGCTGATGCTCGGA 724
                              *    **    *    **    *       *            *    *   

consensus_9139#0      ATCCAGACCATGGACCAATGAAGTCATAGGACAGCAGGTATGTTAGATT--TTATAGCAA 1244
consensus_9139#2      -NCCCATTTGTGGATGCACTGTGT-ACCAGATATCCA-TCTGTTAATTTCCTCAAGGTGG 355
consensus_9139#1      AGCAAATTGGCATGGGTGGCCTGCAGCCGGACAT------TGTAGAGTTGCACAAATTAG 778
                        *                   *      ** *       ***    **    *      

consensus_9139#0      ACTTTAACAATTAATAGAGTATTACATTTTTGCAGGTGTTTCTGTTGTTCATTTCATGGC 1304
consensus_9139#2      ATATAACTNAGAACCCCACAGTGACACAATTAGGAAAATTTCAA--GGACAGTTC-CAAC 412
consensus_9139#1      AAGCAGTGGATAAACACTTGGGGAGATTCGCTGATGCGCGCAAGATTGGCAACTGGAAAA 838
                      *        *  *          * *                       **  *      

consensus_9139#0      AC---CTTTAAATCAGCAATGCTCTGA-TATCGCCCCATTTGTGGATGCACTGTGTACCA 1360
consensus_9139#2      CC---TCAAAAATTTACAAGGTTGGGA-CACGNG-------------------------- 442
consensus_9139#1      GCGCGCTGAGGGAATGCAACGCTGCAATCGCGGCAGGAGCAGACTCTTGTGCAATGCTCT 898
                       *              *** * *   *                                 

consensus_9139#0      GATATCCATCTGTTAATTTCCTCAAGGTGGATATAACTGAGAACCCCACAG--------- 1411
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      TTGCTTCTAGAGCGGAAGCTCTTCTCCAGATCAATCAACTTGATGAGGCTGATTTGGCAA 958
                                                                                  

consensus_9139#0      ------------------------------------------------------------
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      TCTCTAGAGCATCCAAGCTTGATTGTTCATCCTCATGCTCCCAGGACATGATGTTCTGTG 1018
                                                                                  

consensus_9139#0      ------------------------------------------------------------
consensus_9139#2      ------------------------------------------------------------
consensus_9139#1      GATTTCAGTCCAACTCATATCTCTACTATGTACATGCCCAAGTTGACATAGCNTTTGGAA 1078
                                                                                  

consensus_9139#0      -------------------
consensus_9139#2      -------------------
consensus_9139#1      GGTTTGATAGTGCGATGTC 1097
                                         




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)