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Oryza sativa
cluster # 9147 cluster # 9147       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9147#0 length = 2089 sequences # 3  
consensus_9147#1 length = 1487 sequences # 2  
consensus_9147#2 length = 508 sequences # 1  

consensusID : consensus_9147#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 3
consensus length = 2089
fasta sequence
                              [GCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATTAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCGAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAACTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTACTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACTCCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCATTTTAATCAGAAATATAATCCATGTGTTTCTTCCTTAAAAAAAAAAGCGG]

[+] EMBL AK066175             [GCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATTAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCGAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAACTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTACTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACTCCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCATTTTAATCAGAAATATAATCCATGTG                        ]
[+] EMBL CA767080             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            TCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCTGAGGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGAATCTCCATAGCAGGAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACTCCAATTTTGTGGAACTAATAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCATTTTAATCAGAAA                                     ]
[+] EMBL AU225195             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        gccgctAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAGATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACTCCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCATTTTAATCAGAAATATAATCCATGTGTTTCTTCCTTAAAAAAAAAAGCGG]


>consensus_9147#0 GCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGC GAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCA CCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCA AGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGG TACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCC TCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATG CCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGG TTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATC AATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGT CTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTT TGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCA AAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAA TTAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGA CGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGA GGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCC TGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCT TACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTC AACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGG CCTGCAACTGGATACGGATAAGAAGCGAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACA TGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATC TGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATG TATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGGTTGGAAGAAC TGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTTTCTCCAACCTATTGAAACCGACTA CTTGAGAGATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAAGGTTTT AGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTTAGATAT GCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGAGGACAC GACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGCCCACCG AGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGCTAGAAG CTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACTCAAGAA GAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGCCAAGAG ATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACT CCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATGAAGCTT TCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTAT CAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTTACCCAT TTTAATCAGAAATATAATCCATGTGTTTCTTCCTTAAAAAAAAAAGCGG



consensusID : consensus_9147#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 1487
fasta sequence
                              [GTTGGTCTCTTCTTCTTCCTCCTCCATCCCCTTTGCCCTCCTGCTGCGCCGCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGTACCTGAAGCATCTCCCTGTCTAAAACATTTATTTGTAGGTTTCTGATTTATTGTTTCCAACATAGTTATAATTGTATTATTTGATTGTATACGAACAGACAAAATGTATTGTTGCAGACTAAAGCAC]

[+] EMBL AK060179             [GTTGGTCTCTTCTTCTTCCTCCTCCATCCCCTTTGCCCTCCTGCTGCGCCGCCCCAACTCCGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAGGACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTCTGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCAATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAGACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAGAGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTTTATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATGGGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATTGCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAATATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCACTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAACAAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTGAATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGTACCTGAAGCATCTCCCTGTCTAAAACATTTATTTGTAGGTTTCTGATTTATTGTTTCCAACATAGTTATAATTGTATTATTTGATTGTATACGAACAGACAAAATGTATTGTTGCAGACTAAAGCAC]
[+] EMBL CF323788             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   AGAACTCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTGGAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTTGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTTAAATCTCTGTTTGAAAGACAACTGTCT ATAAGGTTGTTGTTTTCCTGTCAACATGTGACTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTGGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTTGTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAGTA                                                                                                                                                                     ]


>consensus_9147#1 GTTGGTCTCTTCTTCTTCCTCCTCCATCCCCTTTGCCCTCCTGCTGCGCCGCCCCAACTC CGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAG GACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTC TGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCA ATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAG ACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAG AGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTT TATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATG GGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATT GCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAAT ATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCA CTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAAC AAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTG AATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAAC TCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTG GAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCTT GTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCTT AAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGAC TCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACTG GATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACATGGGAATATG GACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATTCTT GTATCTACTGATGTTGCTGCTAGGGGCTTGGACTTTCCAAAAGTTAAATGTATCATACAG TATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGTACCTGAAGCATCTCCCTGTC TAAAACATTTATTTGTAGGTTTCTGATTTATTGTTTCCAACATAGTTATAATTGTATTAT TTGATTGTATACGAACAGACAAAATGTATTGTTGCAGACTAAAGCAC



consensusID : consensus_9147#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 508
fasta sequence
                              [TTGGTTTGTAAGGACGCACACCCTCCCTTGTTTGGGAAGGTCACCACCCAGGTGCAACTCAAGAAGAGGAAGAAAGACCACGAAGCGCGAAAGGCCTGCCAAAAGGAGGAAAATCCCGGCCCAGAGATGAATCTCCACTAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACCTCCCATTTTGTGGAACTAACAGCCGCCAGCTTGAAGGTGAAAACACTTGACCCCACTGAAGCTTTCATGTTTTGGCCACGAAGCCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCACAAAGACACCACGAATGTTTTGCTCACGTTTGGGATTATCTACTGCTCTGCTAGTTACCCACTTTTAATCAGAAATATAATCCACTGTGTTTCTTCCTTACCGATATTGTTTGCTCACAAATATTATCCATGTAAAAACTGGATTTGTTAGAAAGGCTTATTGGCTGGATGCCATTGAATGATAAAAAAAAAA]

[+] EMBL BM421866             [TTGGTTTGTAAGGACGCACACCCTCCCTTGTTTGGGAAGGTCACCACCCAGGTGCAACTCAAGAAGAGGAAGAAAGACCACGAAGCGCGAAAGGCCTGCCAAAAGGAGGAAAATCCCGGCCCAGAGATGAATCTCCACTAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACCTCCCATTTTGTGGAACTAACAGCCGCCAGCTTGAAGGTGAAAACACTTGACCCCACTGAAGCTTTCATGTTTTGGCCACGAAGCCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAAATGTATCACAAAGACACCACGAATGTTTTGCTCACGTTTGGGATTATCTACTGCTCTGCTAGTTACCCACTTTTAATCAGAAATATAATCCACTGTGTTTCTTCCTTACCGATATTGTTTGCTCACAAATATTATCCATGTAAAAACTGGATTTGTTAGAAAGGCTTATTGGCTGGATGCCATTGAATGATAAAAAAAAAA]


>consensus_9147#2 TTGGTTTGTAAGGACGCACACCCTCCCTTGTTTGGGAAGGTCACCACCCAGGTGCAACTC AAGAAGAGGAAGAAAGACCACGAAGCGCGAAAGGCCTGCCAAAAGGAGGAAAATCCCGGC CCAGAGATGAATCTCCACTAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATG ATCCACCTCCCATTTTGTGGAACTAACAGCCGCCAGCTTGAAGGTGAAAACACTTGACCC CACTGAAGCTTTCATGTTTTGGCCACGAAGCCCTAGAGAAGAGCTAGTGTACTGCCTGTA ATCTGAAATGTATCACAAAGACACCACGAATGTTTTGCTCACGTTTGGGATTATCTACTG CTCTGCTAGTTACCCACTTTTAATCAGAAATATAATCCACTGTGTTTCTTCCTTACCGAT ATTGTTTGCTCACAAATATTATCCATGTAAAAACTGGATTTGTTAGAAAGGCTTATTGGC TGGATGCCATTGAATGATAAAAAAAAAA



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9147#0      --------------------------------------------------GCCCCAACTC 10
consensus_9147#1      GTTGGTCTCTTCTTCTTCCTCCTCCATCCCCTTTGCCCTCCTGCTGCGCCGCCCCAACTC 60
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      CGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAG 70
consensus_9147#1      CGGCGCCGCAACAAAGCCATGGCCAAGAAGCTCGGCAAGTCGCCGGTGGCGAAGGAGGAG 120
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      GACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTC 130
consensus_9147#1      GACAAGGAGGGGCTCTTCGCGTCATGCTCCTTCACCGACCTCGGCCTCCACCCCACCCTC 180
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      TGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCA 190
consensus_9147#1      TGCGCTCACCTCCAAGATAAGATGGGCTTCCAAGCGCCAACAAGAATCCAAGCTCAGGCA 240
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      ATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAG 250
consensus_9147#1      ATTCCAGTCGCCATGTCTGGACAACACATGCTAGTGAAGGCAGCAACTGGTACTGGCAAG 300
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      ACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAG 310
consensus_9147#1      ACTCTTGCGTACCTTGCACCAATTGTTCACCTTCTCCAGATGAGGGAGCCTCGTGTTGAG 360
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      AGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTT 370
consensus_9147#1      AGAACTGATGGAACTTTTGCTCTGGTACTTGTACCAACACGGGAGCTATGCCTACAAGTT 420
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      TATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATG 430
consensus_9147#1      TATGGGATTGCACAGCAGTTGGTGCATCGTTTCCACTGGCTTGTCCCTGGTTACATAATG 480
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      GGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATT 490
consensus_9147#1      GGTGGTGAGAACAGAGCAAAAGAAAAGGCAAGATTGCGAAAAGGAATATCAATTCTAATT 540
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      GCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAAT 550
consensus_9147#1      GCTACTCCTGGGCGTCTTCTGGACCACTTACAACATACGTCATCATTTGTCTACCCAAAT 600
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      ATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCA 610
consensus_9147#1      ATGCGTTGGATAGTTTTTGATGAAGCTGACAGCATTCTTGAACTTGGTTTTGGGAAAGCA 660
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      CTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAAC 670
consensus_9147#1      CTAGAGGATATACTAGAGCACTTGGGTTCAAGGAATGATACTTCTAACCAAAATAAAAAC 720
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      AAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATTAAAAGGTG 730
consensus_9147#1      AAAATGGAACCTATGAAAAGGCAAAACCTTCTGTTATCTGCAACTCTCAATGAAAAGGTG 780
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      AATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAAC 790
consensus_9147#1      AATCGGTTAGCCAAGATTAGTTTGAAGAACCCTGTGATGATTGGTCTTGACGAACAGAAC 840
consensus_9147#2      ------------------------------------TTGGTTTGTAAGGACGCACACC-C 23
                                                           ** ** **   **** ***   *

consensus_9147#0      TCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTG 850
consensus_9147#1      TCCAGTGCCCATGGGAAGAACCACACTTCTCTATTATCTGATGATGAAGAGGAAATACTG 900
consensus_9147#2      TCCCTTGTT--TGGGAAGGTCACCACCCAGGTGCAA-CTCAAGAAGAGGAAGAAAGACCA 80
                      ***  **    *******  *  ***     *   * ** * ** ** ** **** **  

consensus_9147#0      -GAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCT 909
consensus_9147#1      -GAAAAGCACAACGTTACAGTGGAACAAGCAGTTGACGATTTCAAGCTTCCTGCACAGCT 959
consensus_9147#2      CGAAGCGCGAAAGGCCTGCCAAAAGGAGGAAAATCCCGGCCCAGAGATGAAT-CTCCACT 139
                       ***  **  ** *         *  * * *  *  **      ** *   * * *  **

consensus_9147#0      TGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCT 969
consensus_9147#1      TGTTCAAAGATATGTTAAAGTTTCATGTGGTTCAAGGCTCGCGATTCTTCTTACCATTCT 1019
consensus_9147#2      AG--CAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGATCCACCTCCCATTTTG 197
                       *  ** * **   *  ** *   *      *   ** **  *** *  **  *  **  

consensus_9147#0      TAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGA 1029
consensus_9147#1      TAAATCTCTGTTTGAAAGACAACTGTCTCATAAGGTTGTTGTTTTCCTGTCAACATGTGA 1079
consensus_9147#2      TGGAACT-------AACAGCCGCCAGCTTG-AAGGTGAAAAC--ACTTGACCCCACTGAA 247
                      *  * **       **   *  *   **   *****         * ** *  **    *

consensus_9147#0      CTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACT 1089
consensus_9147#1      CTCTGTAGATTTCCACCATACAGTACTCAGCCAGCTTGAGTGGAGCCCTGGCCTGCAACT 1139
consensus_9147#2      GCTTTCATGTTTTGGCCACGAAGCCCTAGAGAAGAGCTAGTGTACT----GCCTGTAATC 303
                         *  *  ***   ***   **  **     **    **** *      ***** **  

consensus_9147#0      GGATACGGATAAGAAGCGAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACAT--GGGAAT 1147
consensus_9147#1      GGATACGGATAAGAAGCAAAAGTTTATTAGCTGCAAAGTGTTCCGTTTACAT--GGGAAT 1197
consensus_9147#2      TGAAATGTATCACAAAGACA----------CCACGAA-TGTTTTGCTCACGTTTGGGATT 352
                       ** * * ** * **    *          *  * ** ****  * * ** *  **** *

consensus_9147#0      ATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATT 1207
consensus_9147#1      ATGGACCAGGATGATCGCAAGAAATCATTTCTGGGATTCAGTTCTGAGAAATCTGCAATT 1257
consensus_9147#2      ATCTACTGCTCTGCTAGTTA---CCCACTTTT---AATCAGAAATA--TAATCCACTGTG 404
                      **  **     ** * *  *     ** ** *   * ****   *    ****  *  * 

consensus_9147#0      CTTGTATCT-ACTGATGTTGCT-GCT-AGGGGCTTGGACTTTCCAAAAGTTAAATGTATC 1264
consensus_9147#1      CTTGTATCT-ACTGATGTTGCT-GCT-AGGGGCTTGGACTTTCCAAAAGTTAAATGTATC 1314
consensus_9147#2      TTTCTTCCTTACCGATATTGTTTGCTCACAAATATTATCCATGTAAAAACTGGATTTGTT 464
                       ** *  ** ** *** *** * *** *      *   *  *  ****  *  ** * * 

consensus_9147#0      ATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGG-GTTGGAAGAA---- 1319
consensus_9147#1      ATACAGTATGATTCACCTGGGGAGGCTTCTGAATATGTTCACAGGTACCTGAAGCATCTC 1374
consensus_9147#2      AGAAAGGCTTATTGGCT---GGATGCCATTGAATGATAAAAAAAAAA------------- 508
                      * * **  * ***  *    *** **   *****      * *                 

consensus_9147#0      -CTGCAAGGATTGGTGAAAAGGGGGAGGCTCTCCTGTT-TCTCCAACCTA-TTGAAACCG 1376
consensus_9147#1      CCTGTCTAAAACATTTATTTGTAGGTTTCTGATTTATTGTTTCCAACATAGTTATAATTG 1434
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      -ACTACTTGAGAG-ATCTAGAGCTACATGGTGCATCACTTACAGAATACCCCCTCCAAAA 1434
consensus_9147#1      TATTATTTGATTGTATACGAACAGACAAAATGTATTG-TTGCAGACTAAAGCAC------ 1487
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      GGTTTTAGACAGTTTTCCTGTAAATGGACAGAGGCTTCACAAAAGGAAGCAAATATCTTT 1494
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      AGATATGCATCCATGGATAATGTCTTTACAGAGAGCATTGGAAAGTTTTGTCACATCCGA 1554
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      GGACACGACGAAGAAGCTTGCAAGAGATGCCTTCTGTTCTTGGGTGCGCGCCTACACTGC 1614
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      CCACCGAGGTGAACTGAAGAAGATTTTTATGGTCAAGAAGCTCCATTTGGGGCATGTAGC 1674
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      TAGAAGCTTTGGGTTGAAGGAGCAACCCTCCTTGTTGGGAAGGTCACACCAGGTGCAACT 1734
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      CAAGAAGAGGAAGAAAGAACAGAAGCGCGAAAGGCCTGCAAAAAGGAGGAAAATCCCGGC 1794
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      CAAGAGATGAATCTCCATAGCAGAAATGCTTGTAACTCGAAAACTAATGGTGGATCATGA 1854
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      TCCACTCCAATTTTGTGGAACTAACAGCCGCAGCTTGAAGGTGAAAACATTGACCCCATG 1914
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      AAGCTTTCATGTTTTGGCCAGAAGCCTAGAGAAGAGCTAGTGTACTGCCTGTAATCTGAA 1974
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      ATGTATCAAAAGACACAGAATGTTTTGCTCAGTTTGGGATTATCTACTGCTCTGCTAGTT 2034
consensus_9147#1      ------------------------------------------------------------
consensus_9147#2      ------------------------------------------------------------
                                                                                  

consensus_9147#0      ACCCATTTTAATCAGAAATATAATCCATGTGTTTCTTCCTTAAAAAAAAAAGCGG 2089
consensus_9147#1      -------------------------------------------------------
consensus_9147#2      -------------------------------------------------------
                                                                             




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)