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Oryza sativa
cluster # 9149 cluster # 9149       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9149#0 length = 2649 sequences # 5  
consensus_9149#1 length = 785 sequences # 1  

consensusID : consensus_9149#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2649
fasta sequence
                              [CTCGCGGTCTCCCTCTCTCCAACACTCAAATTCTCCGGCGCCGCCCTACTAACTCCGACGGCCCATCTCCGCCGCCTCCGCCGCCGGCGTGAAGCCATCTCCGCCTCCTGTGAAGCCCCCCAACTCCCGCGAGCTCCTCCACGCAGCAGATCCGGCGAGCTCGGATGGACGCGGCGGCGCTAGGGGCGGCCGCCGGGGCGCCGAACCCGGCGGCGCCCGTAGGAGGGGACCAGCAGCCACGGACGGAGCGGCTCAGCGCCGGGGTGCAGCAGCAGCTGAACCTGGAGGGGATGCGGGCGCGCGCCGTGGGCCTGTACAAGGCCATCTCCCGCATCCTCGAGGACTTCGACGCCATCGCCCGCGCCAACCCCAACGCCTCCCCCAAGTGGCAGGATGTGCTTGGGCAATTCTCGATGGTGAGCATGGAGCTCTTCAATATCGTGGAGGACATCAAGAAGGTGTCCAAGGTGTTTGTGGTCTACCCCCGAAACGTTAATGCCGAAAACGCTGCCATACTGCCTGTAATGCTGTCGTCAAAGCTGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAACGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAAGTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAGCCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGGAGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAGACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAGATGGGGCACATAATTTTGGTGATAATTCTGGTCTGTTTCTGTGACATACCTACAATTCTCCATGGTTCACTCCTTGTTTTGAGCATTGGAACTATAGCATCAATGAGTTGTTCATCTGCTCTAGATGTTTTTTTATATAAAAATAATCAATAACTTGCTGCTACCCTTAGTGTTGCCATTTGTGCAGTCTGTATGTCACACAATGCTTCAACAAAAGCATATAACTAGAGTCTATACTTGCAGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAAATCCAATGCAGGTTTGTCTAGTGCCAGTAATAACAGCTTTGACCATTACGAAATTAATAGAATATGTCCATATTATTGCTAGTTGGGCTGAAAGCAAAAAAAGTTACAAAAGGCAGATGTTTTGTTTCCCGTGTATCAATTTGCCATATAATTTGTAATGGTATATTGGTATTCCTTTCTATGATCAACTGTATTAAGTGTTGGTTAGAATGCTTTCCCTTGAACTATTATTAAGACAATTGCATTTCATAAGAGCAATCACCAACCTGACCTCATGCAGGCCTTTGATGTTTCTATCTTGATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAGACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCCAATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCAGCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCAGCTACATGCTCAACAGCAACTAAGACCATCGGCTGCTGGGATGCTAGCACAGAGCGCAATTCCTCAGCTACAAGATCTGCAGGGCCAATCCCAACAAAAATTACAGGTCCCTGGCCAACAGCAGATGCAGTACAATCAAGCCTTGTCACAACAGTATCAGAATAGGCAGATGCAAGCTGGGCGCATGCAACCTGGCATGTCCCAGAGTCAACTGAACCAAGGAAATCAGCTAAGAAGTCATATTAGCCAGTTCACTGGAGCTGCAAACAGTGCAATGTTTACTGCTGCACAGGCATCTTCGAACTCACAGATGATGGCAAATATACCTGGGTCGATGCAATCACAATCACTTTTGCCACAAATGCAAGGCCTTAATCAGTACAGTTTGACTGGTGGGCATCCTCAAAGGAGCCATCCCATCCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGGGAATGCAGCAGCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCATGACAGGCCTCCAGAACCAGACA-CAAAATC-CCAACTTTCCCCAGCAGAGGCAGCAAAACCA-GCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAAGAATTTTCCATATTTTAAGTCCATGCATGCCGTCAGCAGAGGGCAAAACGTCGTGTGGCTGGCCAAATAGCACAGCAGCAACTGCTGCTTTTTTCCTTGTTACAGGGCATCACCAATGGACACATTAGTTTGGTGATATCAGCTGGCTGTATCTATCTTATAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCCTCTATTGATTTAAGGGTTTCATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]

[+] EMBL AK069431             [CTCGCGGTCTCCCTCTCTCCAACACTCAAATTCTCCGGCGCCGCCCTACTAACTCCGACGGCCCATCTCCGCCGCCTCCGCCGCCGGCGTGAAGCCATCTCCGCCTCCTGTGAAGCCCCCCAACTCCCGCGAGCTCCTCCACGCAGCAGATCCGGCGAGCTCGGATGGACGCGGCGGCGCTAGGGGCGGCCGCCGGGGCGCCGAACCCGGCGGCGCCCGTAGGAGGGGACCAGCAGCCACGGACGGAGCGGCTCAGCGCCGGGGTGCAGCAGCAGCTGAACCTGGAGGGGATGCGGGCGCGCGCCGTGGGCCTGTACAAGGCCATCTCCCGCATCCTCGAGGACTTCGACGCCATCGCCCGCGCCAACCCCAACGCCTCCCCCAAGTGGCAGGATGTGCTTGGGCAATTCTCGATGGTGAGCATGGAGCTCTTCAATATCGTGGAGGACATCAAGAAGGTGTCCAAGGTGTTTGTGGTCTACCCCCGAAACGTTAATGCCGAAAACGCTGCCATACTGCCTGTAATGCTGTCGTCAAAGCTGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAACGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAAGTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAGCCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGGAGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAGACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAGATGGGGCACATAATTTTGGTGATAATTCTGGTCTGTTTCTGTGACATACCTACAATTCTCCATGGTTCACTCCTTGTTTTGAGCATTGGAACTATAGCATCAATGAGTTGTTCATCTGCTCTAGATGTTTTTTTATATAAAAATAATCAATAACTTGCTGCTACCCTTAGTGTTGCCATTTGTGCAGTCTGTATGTCACACAATGCTTCAACAAAAGCATATAACTAGAGTCTATACTTGCAGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAAATCCAATGCAGGTTTGTCTAGTGCCAGTAATAACAGCTTTGACCATTACGAAATTAATAGAATATGTCCATATTATTGCTAGTTGGGCTGAAAGCAAAAAAAGTTACAAAAGGCAGATGTTTTGTTTCCCGTGTATCAATTTGCCATATAATTTGTAATGGTATATTGGTATTCCTTTCTATGATCAACTGTATTAAGTGTTGGTTAGAATGCTTTCCCTTGAACTATTATTAAGACAATTGCATTTCATAAGAGCAATCACCAACCTGACCTCATGCAGGCCTTTGATGTTTCTATCTTGATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAGACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCCAATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCAGCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCAGCTACATGCTCAACAGCAACTAAGACCATCGGCTGCTGGGATGCTAGCACAGAGCGCAATTCCTCAGCTACAAGATCTGCAGGGCCAATCCCAACAAAAATTACAGGTCCCTGGCCAACAGCAGATGCAGTACAATCAAGCCTTGTCACAACAGTATCAGAATAGGCAGATGCAAGCTGGGCGCATGCAACCTGGCATGTCCCAGAGTCAACTGAACCAAGGAAATCAGCTAAGAAGTCATATTAGCCAGTTCACTGGAGCTGCAAACAGTGCAATGTTTACTGCTGCACAGGCATCTTCGAACTCACAGATGATGGCAAATATACCTGGGTCGATGCAATCACAATCACTTTTGCCACAAATGCAAGGCCTTAATCGGTACAGTTTGACTGGTGGGCATCCTCAAAGGAGCCAT CCATCCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGGGAATGCAGCAGCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCATGACAGGCCTCCAGAACCAGACA CAAAATC CCAACTTTCCCCAGCAGAGGCAGCAAAACCA GCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAAGAATTTTCCATATCTTAAGTCCATGCATGCCGTCAGCAGAGGGCAAAACGTCGTGTGGCTGGCCAAATAGCACAGCAGCAACTGCTGCTTTCTTCCTTGTTACAGGGCATCACCAATGGACACATTAGTTTGGTGATATCAGCTGGCTGTATCTATCTTATAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCCTCTATTGATTTAAGG                                                      ]
[+] EMBL AU166722             [               TCTCCAACACTCAAATTCTCCGGCGCCGCCCTACTAACTCCGACGGCCCATCTCCGCCGCCTCCGCCGCCGGCGTGAAGCCATCTCCGCCTCCTGTGAAGCCCCCCAACTCCCGCGAGCTCCTCCACGCAGCAGATCCGGCGAGCTCGGATGGACGCGGCGGCGCTAGGGGCGGCCGCCGGGGCGCCGAACCCGGCGGCGCCCGTAGGAGGGGACCAGCAGCCACGGACGGAGCGGCTCAGCGCCGGGGTGCAGCAGCAGCTGAACCTGGAGGGGATGCGGGCGCGCGCCGTGGGCCTGTACAAGGCCATCTCCCGCATCCTCGAGGACTTTGACGCCATNGCCCGCGCCAACCCCAACGCCTTCCCCAAGTGGCAGGATGTGCTTGGGCAAa                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF323968             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              GCCACAAATGCAAGGCCTTAATCAGTACAGTTTGACTGGTGGGCATCCTCAAAGGAGCCATCCCATCCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGGGAATGCAGCAGCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCATGACAGGCCTCCAGAACCAGACACCAAAATCTCCAACTTTCCCCAGCAGAGGCAGCAAAACCACGCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAAGAATTTTCCATATTTTAAGTCCATGCATGCCGTCAGCAGAGGGCAAAACGTCGTGTGGCTGGCCAAATAGCACAGCAGCAACTGCTGCTTTTTTCCTTGTTACAGGGCATCACCAATGGACACATTAGTTTGGTGATATCAGCTGGCTGTATCTATCTTATAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCCTCTATTGATTTAAGGGTTTCATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[-] EMBL CF323836             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CACAAATGCAAGGCCTTAATCAGTACAGTTTGACTGGTGGGCATCCTCAAAGGAGCCATCCCATCCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGGGAATGCAGCAGCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCATGACAGGCCTCCAGAACCAGACA CAAAATC CCAACTTTCCCCAGCAGAGGCAGCAAAACCA GCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAAGAATTTTCCATATTTTAAGTCCATGCATGCCGTCAGCAGAGGGCAAAACGTCGTGTGGCTGGCCAAATAGCACAGCAGCAACTGCTGCTTTTTTCCTTGTTACAGGGCATCACCAATGGACACATTAGTTTGGTGATATCAGCTGGCTGTATCTATCTTATAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCCTCTATTGATTTAAGGGTTTCATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCGAGACTAGTT]
[+] EMBL AU166721             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      GTTTGGTATGGGAGGCGCAAATTTNACCAGCATGATGGGAATGCAGCANCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCATGACAGGCCTCCAGAACCAGACC CAAAATC CCAACTTTCCCCAGCAGAGGCAGCAAAACCA GCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAANAATTTTCCATATNTTAAGTCCATGCATGCCGTCAGCAAAGGGCAAAACGTNGTGTGGCTGGCCAAATAGCNCAGCAGCAACTGCTGCTTTNTTCCTTGTTACAGGGCATCNCCAATGGACNCATTAGTTTGGTGANATCAGCTGGCTGTATCTATCTTANAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCCTCTATTGATTTAAGGGTTTCATGGTAAAAAAAAAAAAAAAAAA                          ]


>consensus_9149#0 CTCGCGGTCTCCCTCTCTCCAACACTCAAATTCTCCGGCGCCGCCCTACTAACTCCGACG GCCCATCTCCGCCGCCTCCGCCGCCGGCGTGAAGCCATCTCCGCCTCCTGTGAAGCCCCC CAACTCCCGCGAGCTCCTCCACGCAGCAGATCCGGCGAGCTCGGATGGACGCGGCGGCGC TAGGGGCGGCCGCCGGGGCGCCGAACCCGGCGGCGCCCGTAGGAGGGGACCAGCAGCCAC GGACGGAGCGGCTCAGCGCCGGGGTGCAGCAGCAGCTGAACCTGGAGGGGATGCGGGCGC GCGCCGTGGGCCTGTACAAGGCCATCTCCCGCATCCTCGAGGACTTCGACGCCATCGCCC GCGCCAACCCCAACGCCTCCCCCAAGTGGCAGGATGTGCTTGGGCAATTCTCGATGGTGA GCATGGAGCTCTTCAATATCGTGGAGGACATCAAGAAGGTGTCCAAGGTGTTTGTGGTCT ACCCCCGAAACGTTAATGCCGAAAACGCTGCCATACTGCCTGTAATGCTGTCGTCAAAGC TGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAA CGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAA GTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAG CCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGG AGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAG ACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAG ATGGGGCACATAATTTTGGTGATAATTCTGGTCTGTTTCTGTGACATACCTACAATTCTC CATGGTTCACTCCTTGTTTTGAGCATTGGAACTATAGCATCAATGAGTTGTTCATCTGCT CTAGATGTTTTTTTATATAAAAATAATCAATAACTTGCTGCTACCCTTAGTGTTGCCATT TGTGCAGTCTGTATGTCACACAATGCTTCAACAAAAGCATATAACTAGAGTCTATACTTG CAGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAA ATCCAATGCAGGTTTGTCTAGTGCCAGTAATAACAGCTTTGACCATTACGAAATTAATAG AATATGTCCATATTATTGCTAGTTGGGCTGAAAGCAAAAAAAGTTACAAAAGGCAGATGT TTTGTTTCCCGTGTATCAATTTGCCATATAATTTGTAATGGTATATTGGTATTCCTTTCT ATGATCAACTGTATTAAGTGTTGGTTAGAATGCTTTCCCTTGAACTATTATTAAGACAAT TGCATTTCATAAGAGCAATCACCAACCTGACCTCATGCAGGCCTTTGATGTTTCTATCTT GATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAG ACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCC AATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCA GCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCA GCTACATGCTCAACAGCAACTAAGACCATCGGCTGCTGGGATGCTAGCACAGAGCGCAAT TCCTCAGCTACAAGATCTGCAGGGCCAATCCCAACAAAAATTACAGGTCCCTGGCCAACA GCAGATGCAGTACAATCAAGCCTTGTCACAACAGTATCAGAATAGGCAGATGCAAGCTGG GCGCATGCAACCTGGCATGTCCCAGAGTCAACTGAACCAAGGAAATCAGCTAAGAAGTCA TATTAGCCAGTTCACTGGAGCTGCAAACAGTGCAATGTTTACTGCTGCACAGGCATCTTC GAACTCACAGATGATGGCAAATATACCTGGGTCGATGCAATCACAATCACTTTTGCCACA AATGCAAGGCCTTAATCAGTACAGTTTGACTGGTGGGCATCCTCAAAGGAGCCATCCCAT CCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGG GAATGCAGCAGCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCA TGACAGGCCTCCAGAACCAGACACAAAATCCCAACTTTCCCCAGCAGAGGCAGCAAAACC AGCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAAGAATTTTCCATATTTTAAG TCCATGCATGCCGTCAGCAGAGGGCAAAACGTCGTGTGGCTGGCCAAATAGCACAGCAGC AACTGCTGCTTTTTTCCTTGTTACAGGGCATCACCAATGGACACATTAGTTTGGTGATAT CAGCTGGCTGTATCTATCTTATAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCC TCTATTGATTTAAGGGTTTCATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCG AGACTAGTT



consensusID : consensus_9149#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 785
fasta sequence
                              [TGCCATACTGCCTGTAATGCTGTCGTCAAAGCTGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAACGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAAGTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAGCCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGGAGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAGACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAGATGGGGCACATAATTTTGGTGATAATTCTGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAAATCCAATGCAGGCCTTTGATGTTTCTATCTTGATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAGACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCCAATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCAGCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCAGCTACATGCTCAACAGCAACTAAGACCATCGGCTG]

[+] EMBL CB674599             [TGCCATACTGCCTGTAATGCTGTCGTCAAAGCTGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAACGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAAGTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAGCCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGGAGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAGACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAGATGGGGCACATAATTTTGGTGATAATTCTGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAAATCCAATGCAGGCCTTTGATGTTTCTATCTTGATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAGACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCCAATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCAGCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCAGCTACATGCTCAACAGCAACTAAGACCATCGGCTG]


>consensus_9149#1 TGCCATACTGCCTGTAATGCTGTCGTCAAAGCTGTTACCTGAGATGGAAGCTGAAGAAGC TACAAAGAGGGACAACTTGTTGTCTGGAATAACGAATCTAACAGTTTCTGGACAAATTGA AAAGTTAAAGACTAGGATAGATATGATTGGAAGTGCATGTGAAACAGCTGAGAAAGTAAT TGCTGAAAGTCGCAAGAATTATGGTCTAGGAGCCCGTCAGGGGGCAAATCTTGGTCCTAC ATTGGACAAGGCACAGGCTGCAAAGATACAGGAGCAGGAAGGCCTACTTAGAGCAGCGGT AAATTATGGTGAAGGATTGCGTGTACCGGGAGACCAAAGGCAGATGTATTCATCTCTTCC TAGCCATTTAGTGGACGTACTTCCTTTTGGAGATGGGGCACATAATTTTGGTGATAATTC TGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAAA TCCAATGCAGGCCTTTGATGTTTCTATCTTGATGTTCAAATTTGGGCCTTCATTCTAATA GCAGGTGTCTGGAGGACAGTTACTTGGCAGACCTGCTCCATCACCTGGAGCTACAGGAAC GCCTAATTTTGAAAATGTATCTACTCCTCCAATGCCATATGCAAACTCCCCTAGGTCAGG GACCAATATGATGAACACCCCTTCACCCCAGCAGCATTTGACGGCACAACAACATAGGCA AAAACTGATGCAAACATCTCAGCAACAGCAGCTACATGCTCAACAGCAACTAAGACCATC GGCTG



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9149#0      CTCGCGGTCTCCCTCTCTCCAACACTCAAATTCTCCGGCGCCGCCCTACTAACTCCGACG 60
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GCCCATCTCCGCCGCCTCCGCCGCCGGCGTGAAGCCATCTCCGCCTCCTGTGAAGCCCCC 120
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      CAACTCCCGCGAGCTCCTCCACGCAGCAGATCCGGCGAGCTCGGATGGACGCGGCGGCGC 180
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TAGGGGCGGCCGCCGGGGCGCCGAACCCGGCGGCGCCCGTAGGAGGGGACCAGCAGCCAC 240
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GGACGGAGCGGCTCAGCGCCGGGGTGCAGCAGCAGCTGAACCTGGAGGGGATGCGGGCGC 300
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GCGCCGTGGGCCTGTACAAGGCCATCTCCCGCATCCTCGAGGACTTCGACGCCATCGCCC 360
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GCGCCAACCCCAACGCCTCCCCCAAGTGGCAGGATGTGCTTGGGCAATTCTCGATGGTGA 420
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GCATGGAGCTCTTCAATATCGTGGAGGACATCAAGAAGGTGTCCAAGGTGTTTGTGGTCT 480
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      ACCCCCGAAACGTTAATGCCGAAAACGCTGCCATACTGCCTGTAATGCTGTCGTCAAAGC 540
consensus_9149#1      ----------------------------TGCCATACTGCCTGTAATGCTGTCGTCAAAGC 32
                                                  ********************************

consensus_9149#0      TGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAA 600
consensus_9149#1      TGTTACCTGAGATGGAAGCTGAAGAAGCTACAAAGAGGGACAACTTGTTGTCTGGAATAA 92
                      ************************************************************

consensus_9149#0      CGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAA 660
consensus_9149#1      CGAATCTAACAGTTTCTGGACAAATTGAAAAGTTAAAGACTAGGATAGATATGATTGGAA 152
                      ************************************************************

consensus_9149#0      GTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAG 720
consensus_9149#1      GTGCATGTGAAACAGCTGAGAAAGTAATTGCTGAAAGTCGCAAGAATTATGGTCTAGGAG 212
                      ************************************************************

consensus_9149#0      CCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGG 780
consensus_9149#1      CCCGTCAGGGGGCAAATCTTGGTCCTACATTGGACAAGGCACAGGCTGCAAAGATACAGG 272
                      ************************************************************

consensus_9149#0      AGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAG 840
consensus_9149#1      AGCAGGAAGGCCTACTTAGAGCAGCGGTAAATTATGGTGAAGGATTGCGTGTACCGGGAG 332
                      ************************************************************

consensus_9149#0      ACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAG 900
consensus_9149#1      ACCAAAGGCAGATGTATTCATCTCTTCCTAGCCATTTAGTGGACGTACTTCCTTTTGGAG 392
                      ************************************************************

consensus_9149#0      ATGGGGCACATAATTTTGGTGATAATTCTGGTCTGTTTCTGTGACATACCTACAATTCTC 960
consensus_9149#1      ATGGGGCACATAATTTTGGTGATAATTCTGGT---------------------------- 424
                      ********************************                            

consensus_9149#0      CATGGTTCACTCCTTGTTTTGAGCATTGGAACTATAGCATCAATGAGTTGTTCATCTGCT 1020
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      CTAGATGTTTTTTTATATAAAAATAATCAATAACTTGCTGCTACCCTTAGTGTTGCCATT 1080
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TGTGCAGTCTGTATGTCACACAATGCTTCAACAAAAGCATATAACTAGAGTCTATACTTG 1140
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      CAGGTGTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAA 1200
consensus_9149#1      -----GTGTACCCCAAAAATACCTCAACATTTGTACCTAATGTTGTCAACGCCCAGGGAA 479
                           *******************************************************

consensus_9149#0      ATCCAATGCAGGTTTGTCTAGTGCCAGTAATAACAGCTTTGACCATTACGAAATTAATAG 1260
consensus_9149#1      ATCCAATGCAGG------------------------------------------------ 491
                      ************                                                

consensus_9149#0      AATATGTCCATATTATTGCTAGTTGGGCTGAAAGCAAAAAAAGTTACAAAAGGCAGATGT 1320
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TTTGTTTCCCGTGTATCAATTTGCCATATAATTTGTAATGGTATATTGGTATTCCTTTCT 1380
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      ATGATCAACTGTATTAAGTGTTGGTTAGAATGCTTTCCCTTGAACTATTATTAAGACAAT 1440
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TGCATTTCATAAGAGCAATCACCAACCTGACCTCATGCAGGCCTTTGATGTTTCTATCTT 1500
consensus_9149#1      -----------------------------------------CCTTTGATGTTTCTATCTT 510
                                                               *******************

consensus_9149#0      GATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAG 1560
consensus_9149#1      GATGTTCAAATTTGGGCCTTCATTCTAATAGCAGGTGTCTGGAGGACAGTTACTTGGCAG 570
                      ************************************************************

consensus_9149#0      ACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCC 1620
consensus_9149#1      ACCTGCTCCATCACCTGGAGCTACAGGAACGCCTAATTTTGAAAATGTATCTACTCCTCC 630
                      ************************************************************

consensus_9149#0      AATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCA 1680
consensus_9149#1      AATGCCATATGCAAACTCCCCTAGGTCAGGGACCAATATGATGAACACCCCTTCACCCCA 690
                      ************************************************************

consensus_9149#0      GCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCA 1740
consensus_9149#1      GCAGCATTTGACGGCACAACAACATAGGCAAAAACTGATGCAAACATCTCAGCAACAGCA 750
                      ************************************************************

consensus_9149#0      GCTACATGCTCAACAGCAACTAAGACCATCGGCTGCTGGGATGCTAGCACAGAGCGCAAT 1800
consensus_9149#1      GCTACATGCTCAACAGCAACTAAGACCATCGGCTG------------------------- 785
                      ***********************************                         

consensus_9149#0      TCCTCAGCTACAAGATCTGCAGGGCCAATCCCAACAAAAATTACAGGTCCCTGGCCAACA 1860
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GCAGATGCAGTACAATCAAGCCTTGTCACAACAGTATCAGAATAGGCAGATGCAAGCTGG 1920
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GCGCATGCAACCTGGCATGTCCCAGAGTCAACTGAACCAAGGAAATCAGCTAAGAAGTCA 1980
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TATTAGCCAGTTCACTGGAGCTGCAAACAGTGCAATGTTTACTGCTGCACAGGCATCTTC 2040
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GAACTCACAGATGATGGCAAATATACCTGGGTCGATGCAATCACAATCACTTTTGCCACA 2100
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      AATGCAAGGCCTTAATCAGTACAGTTTGACTGGTGGGCATCCTCAAAGGAGCCATCCCAT 2160
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      CCCAAATGCTGACTGACCAAATGTTTGGTATGGGAGGCGCAAATTCTACCAGCATGATGG 2220
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      GAATGCAGCAGCAGCAGCAATTTAACATGCAAGCAAATGCTCAGAACCTGCAACAAGGCA 2280
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TGACAGGCCTCCAGAACCAGACACAAAATCCCAACTTTCCCCAGCAGAGGCAGCAAAACC 2340
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      AGCAATGATTCAAACAAGTAGTGTTTTGCTAGGCCGAGGAAGAATTTTCCATATTTTAAG 2400
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TCCATGCATGCCGTCAGCAGAGGGCAAAACGTCGTGTGGCTGGCCAAATAGCACAGCAGC 2460
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      AACTGCTGCTTTTTTCCTTGTTACAGGGCATCACCAATGGACACATTAGTTTGGTGATAT 2520
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      CAGCTGGCTGTATCTATCTTATAATGATGGATGCTTATGTCTTATGTCTTCATGCGGTCC 2580
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      TCTATTGATTTAAGGGTTTCATGGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTCG 2640
consensus_9149#1      ------------------------------------------------------------
                                                                                  

consensus_9149#0      AGACTAGTT 2649
consensus_9149#1      ---------
                               




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)