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Oryza sativa
cluster # 9153 cluster # 9153       Sequences # 6       consensus # 2


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9153#0 length = 2486 sequences # 5  
consensus_9153#1 length = 271 sequences # 1  

consensusID : consensus_9153#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 5
consensus length = 2486
fasta sequence
                              [TTACGACTCTTGCCACTCTCCGCCGCCCCACCAAACCCCACCGGCGACCTCACCGGAGATGACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCCCCGCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGTGATGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTAGGAGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGACACAGTTTTACCAGCCTCCACATGTGGAGCGAACGCAAGTCAGCCGAGGGAATGGCCAGAAATTGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATATCCTTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGAAGTAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAAGCCAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAATCCAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTATGGAGATCTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCTGGCTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTATGTGGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGTTCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAATGGTAAAAAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGGGTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGGGAATTTGTCAGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCACACTCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGGTCCCATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCGCCGTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACA-GGGAACCGAGAATAAGCACTATGGAT-GAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTT--GAGTGGCAATTCTGAATAT-GGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCT-GAAGGGATCTGCCAGCCAGATTGCTA-CTTAATTTGTACATATATATATGCTTGAGTAATTAGAGATGCAGGAATTCTGCTCATGGGTTTATTTTGAGTTTTTTTGTCTGATAAGGCTGAGGATAGCAGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCACCACTTTTATGTATGCATGTCTAATTAGCTTCTTATGAACAATTGTATAAGAACTCCTAAGTCCTAACCTAGCTGCACATTTTGGCCATGGCAGTGCCA]

[+] EMBL AK065512             [TTACGACTCTTGCCACTCTCCGCCGCCCCACCAAACCCCACCGGCGACCTCACCGGAGATGACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCCCCGCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGTGATGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTAGGAGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGACACAGTTTTACCAGCCTCCACATGTGGAGCGAACGCAAGTCAGCCGAGGGAATGGCCAGAAATTGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATATCCTTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGAAGTAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAAGCCAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAATCCAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTATGGAGATCTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCTGGCTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTATGTGGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGTTCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAATGGTAAAAAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGGGTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGGGAATTTGTCAGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCACACTCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGGTCCCATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCGCCGTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACA GGGAACCGAGAATAAGCACTATGGAT GAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTT  GAGTGGCAATTCTGAATAT GGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCT GAAGGGATCTGCCAGCCAGATTGCTA CTTAATTTGTACATATATATATGCTTGAGTAATTAGAGATGCAGGAATTCTGCTCATGGGTTTATTTTGAGTTTTTTTGTCTGATAAGGCTGAGGATAGCAGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCACCACTTTTATGTATGCATGTCTAATTAGCTTCTTATGAACAATTGTATAAGAACTCCTAAGTCCTAACCTAGCTGCACATTTTGGCCATGGCAGTGCCA]
[+] EMBL CF324312             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACAGTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGTTCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAACCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAATGGTAAAAAAGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATGCACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCTAAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGGGTCCTGTTCCACGACAGGAAGGAACACTTC                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               ]
[+] EMBL CB096383             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                         CAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCGCCGTTTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCATAACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGNTCACAGGGGAACCGAGAATAAGCACTATGGATGGAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTTGGAGNGGCAATTCTGAATATGGGCTTGNCATCANATTGGGAGCATGNTCTGAAGGAAAAAATCGGCTGGA CTNNAAGGGATCTGCNGNCCANA TGCTACCTNAATTNG GC  ATANNTATGCCTNGGGAATTAAAGAAGC                                                                                                                                                                                                             ]
[+] EMBL CA766264             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      CTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTTGACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGGCCACTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATCGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACA GGGAACCGAGAATAAGCACTATGGAT GGAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTT  GAGTGGCAATTCTGAATAT GGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCT GAAGGGATCTGCCAGCCAGATTGCTA CTTAATTTGNACATATATATATGCTTGAGTA                                                                                                                                                                                                                        ]
[+] EMBL CA998858             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTTGAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATATTGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTCTTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGAAGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGGAGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAATTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCCAGTACCGCAACTCGCACCGAGCAGAGTTCACA GGGAACCGAGAATAAGCACTATGGAT GAAGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTT  GAGTGGCAATTCTGAATAT GGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCT GAAGGGATCTGCCAGCCAGATTGCTA CTTAATTTGTACATATATATATG                                                                                                                                                                                                                                ]


>consensus_9153#0 TTACGACTCTTGCCACTCTCCGCCGCCCCACCAAACCCCACCGGCGACCTCACCGGAGAT GACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCCCC GCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGTGA TGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTAGG AGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGACAC AGTTTTACCAGCCTCCACATGTGGAGCGAACGCAAGTCAGCCGAGGGAATGGCCAGAAAT TGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATATCC TTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGAAG TAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAAGC CAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAATC CAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTATGGAGAT CTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCTGG CTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTATGT GGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACA GTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGT TCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAA CCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAATGGTAAAAA AGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATG CACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCT AAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGG GTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGGGAATTTGTC AGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCACAC TCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGGTCC CATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCGCCGT TTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCAT AACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTT GACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCA CTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTT GAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATAT TGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTC TTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGA AGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGG AGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAA TTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCC AGTACCGCAACTCGCACCGAGCAGAGTTCACAGGGAACCGAGAATAAGCACTATGGATGA AGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTGAGTGGCAATTCTGAATA TGGCTTGTCATCAGATTGGGAGCATGTTCTGAAGGAAGAAATCGGCTGGAGCTGAAGGGA TCTGCCAGCCAGATTGCTACTTAATTTGTACATATATATATGCTTGAGTAATTAGAGATG CAGGAATTCTGCTCATGGGTTTATTTTGAGTTTTTTTGTCTGATAAGGCTGAGGATAGCA GGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCACCACTTTTATGTA TGCATGTCTAATTAGCTTCTTATGAACAATTGTATAAGAACTCCTAAGTCCTAACCTAGC TGCACATTTTGGCCATGGCAGTGCCA



consensusID : consensus_9153#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 271
fasta sequence
                              [TGAGTGGCAAATTCTGAATAAAGGCTTGTCATCCAGANTTGGNAACATTGTTCTNAAGGCAAAAAAACCGGCTGGANCTGAANGGATCTGCCAGCCAGATTGCCACTTAATNTGTNCATATATATATGCTTGAGTAATTAGAGATGCNGGAATTCTGCNCATGGGTTTATTTTGAGTTTTTTTGNCTGATAAGGCTGAGGATAGCNGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCNCCACTTTTATGTATGCAT]

[+] EMBL D42793               [TGAGTGGCAAATTCTGAATAAAGGCTTGTCATCCAGANTTGGNAACATTGTTCTNAAGGCAAAAAAACCGGCTGGANCTGAANGGATCTGCCAGCCAGATTGCCACTTAATNTGTNCATATATATATGCTTGAGTAATTAGAGATGCNGGAATTCTGCNCATGGGTTTATTTTGAGTTTTTTTGNCTGATAAGGCTGAGGATAGCNGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCNCCACTTTTATGTATGCAT]


>consensus_9153#1 TGAGTGGCAAATTCTGAATAAAGGCTTGTCATCCAGANTTGGNAACATTGTTCTNAAGGC AAAAAAACCGGCTGGANCTGAANGGATCTGCCAGCCAGATTGCCACTTAATNTGTNCATA TATATATGCTTGAGTAATTAGAGATGCNGGAATTCTGCNCATGGGTTTATTTTGAGTTTT TTTGNCTGATAAGGCTGAGGATAGCNGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTC TGAAAAAACAGCNCCACTTTTATGTATGCAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9153#0      TTACGACTCTTGCCACTCTCCGCCGCCCCACCAAACCCCACCGGCGACCTCACCGGAGAT 60
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GACCTCCTCCTCCACCGCCGCCGCCGCCATTCAATCCGCCTCGTCCTCCACCCTCTCCCC 120
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GCACGCGGCTCCCTTCGCCCTCCCCGTCCGCCCGGCCCGCGCCCCTCTCCAAGATGGTGA 180
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TGTTTCTAGGTCGATGGATGGTAGCATTGTGGTGCATGGATTAGATAATAAAATTTTAGG 240
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGATGCTCATCCATCATCGTCGTCAGCAACATCTTGCTTTCGAACACAATCATTTGACAC 300
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGTTTTACCAGCCTCCACATGTGGAGCGAACGCAAGTCAGCCGAGGGAATGGCCAGAAAT 360
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TGGCAGCGATGCAGCTTATCCATCCTCGATTTGTTCTACTTCTGTGGTATTTTCATATCC 420
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TTCAGTCATGATGGCCTCCAATCATAACCAGAAAAATCCCTTGTACCCTGGGATGGGAAG 480
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TAATGGAAGCAGATGTTCAACAGTCAAGATAGAAAGCCCACCAAATAAAATATCTGAAGC 540
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CAATAAAATCAGTTGTGGTTTAACGAGCAAGTCATCTATGACAAAAGATGTTAGTAAATC 600
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CAACGAAGATGCTGTGAAAAATGCCCCCTTTCCACAAATTTTGGAAGTTGGTATGGAGAT 660
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CTGCTCCAAAGAGGCAAGCCCTGTCTCCCATACGAGGCCTCTTCATATTTCAACTGCTGG 720
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CTCTGATCCATGCGATTCTATGGCTGATGGTGTGAAAACAGAACCATCAGAATGCTATGT 780
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GGATTCACCATGTTGGAGAGGAAGAGGAACTTCACTTTCTCATCAAACGTCAGTGACACA 840
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GTTAATAAATCAAGAATCAGAGGCTTTTGATGCTGGCCAAAAGAAGAGCACTAGCACTGT 900
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TCAGCATTGTGAGGTTCTGACCGCATCTCAAAATTTGGACACTATCGAGAATAAGCAAAA 960
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CCAATCCCAATCTCATGTTGAATTGTCTGTGTCTATGAAATCTGGAGACAATGGTAAAAA 1020
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGAGGAAGAAGTTTCCCACAATAAGGAGCTTGAGAGTGCAAAACAATGTGCAGCAAAATG 1080
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CACCGCAGAGCAGAAACACAGTTTGGAGCTGAGAGATAATAGCGTGAAGCGATCTGGTCT 1140
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AAACTTTGCTGCTCCTGATTTTATCCCTTCATCAGTTGGGAAATCAAAAATTGTCAAAGG 1200
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GTCCTGTTCCACGACAGGAAGGAACACTTCTGGAATTCTCAAGGCAATGGGGAATTTGTC 1260
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGAAATGCTTCGCGATAGCTGTTTGTTGGATGAAAATGAGCTCGATGAGCATGAGCACAC 1320
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TCTCCTCCAATCAGTAATTGAGAATCTTCAGACATGTATTGATAGGAAAAAAAAGGGTCC 1380
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CATTAATGATGATGGCTCTAACAAGGCAGGACTAAGGGCTCCTCATTCTCAGTCCGCCGT 1440
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TTTAAAATCTTATGCAGGGGACTACAGAGGTAGTTGTACAACCAATGGTGGAAATGGCAT 1500
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AACTGTAAATAAATCTGTGGGTCCTACTCGTGTGCTCAGTGATTTTGGGAAGAACAGCTT 1560
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GACATGGTCCCAGCCTTCATTCAACAATATTCCAAGGATGATATCCTGTGAAGAAGACCA 1620
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      CTCACAGATTCTCATTTATAAGAATCTGTGGATTGATGCTGAGCGTACAAATTGTGAGTT 1680
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      GAAGTATCTACTGAAACAGAACCGTATCAAAATTGGCCAAGAATCCAGTATGGCTCATAT 1740
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TGGTGGTCCAAGAAATCCTTCTTTCCAGGCATGTGATTTAGGTGCAGGTCCAAGTAATTC 1800
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TTATGGAGCTGCCATATCTTACCCACCAACTCTGAGTTTTCCTAAGGGTGATTCTACTGA 1860
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGAGACATCAAGAGCAAGGAACACTGACCTCCTTTACACTGGTGATTGCATCCGGTTAGG 1920
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGATAACAGTGTGCCTAGCTGCTCTGCAAGCACCATCAGCCATCCTACTCGACCGAATAA 1980
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      TTTTCAGGGTGACCTTTTAACAGGCTTGGAGGAAACTGGCTTGCATCATCATGCTCAGCC 2040
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGTACCGCAACTCGCACCGAGCAGAGTTCACAGGGAACCGAGAATAAGCACTATGGATGA 2100
consensus_9153#1      ------------------------------------------------------------
                                                                                  

consensus_9153#0      AGCGTCAGGCCACTCATGCTTCACCGGAGCAGACGGCATTTTGAGTGGCAA-TTCTGAAT 2159
consensus_9153#1      -----------------------------------------TGAGTGGCAAATTCTGAAT 19
                                                               ********** ********

consensus_9153#0      AT-GGCTTGTCATC--AGATTGGGAGCAT-GTTCTGAAGG--AAGAAATCGGCTGGAGCT 2213
consensus_9153#1      AAAGGCTTGTCATCCAGANTTGGNAACATTGTTCTNAAGGCAAAAAAACCGGCTGGANCT 79
                      *  ***********     **** * *** ***** ****  ** *** ******** **

consensus_9153#0      GAAGGGATCTGCCAGCCAGATTGCTACTTAATTTGTACATATATATATGCTTGAGTAATT 2273
consensus_9153#1      GAANGGATCTGCCAGCCAGATTGCCACTTAATNTGTNCATATATATATGCTTGAGTAATT 139
                      *** ******************** ******* *** ***********************

consensus_9153#0      AGAGATGCAGGAATTCTGCTCATGGGTTTATTTTGAGTTTTTTTGTCTGATAAGGCTGAG 2333
consensus_9153#1      AGAGATGCNGGAATTCTGCNCATGGGTTTATTTTGAGTTTTTTTGNCTGATAAGGCTGAG 199
                      ******** ********** ************************* **************

consensus_9153#0      GATAGCAGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCACCACTT 2393
consensus_9153#1      GATAGCNGGCACTGCTTGGCAAAATGGTGCTTTCCAGCCTCTGAAAAAACAGCNCCACTT 259
                      ****** ********************************************** ******

consensus_9153#0      TTATGTATGCATGTCTAATTAGCTTCTTATGAACAATTGTATAAGAACTCCTAAGTCCTA 2453
consensus_9153#1      TTATGTATGCAT------------------------------------------------ 271
                      ************                                                

consensus_9153#0      ACCTAGCTGCACATTTTGGCCATGGCAGTGCCA 2486
consensus_9153#1      ---------------------------------
                                                       




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)