These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9157#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1142 fasta sequence [CCCAACACAGCGACACCACCAGCGCCCACCTCCATCGCCGCCGCTCCCCTCGCCTCCCGCGGTTTACGCTCGCGCGCAGGAGTTCTTGGTTGGCTGACTGCGAGTAAGCGAATCATCCGGCAATCATGGCGTCCCGCGTCAGGTTTGAGAATTCCAGCGAGATTGGAGTGTTCGCGAGGCTCACCAACGCCTACTGCGTGCTCCCCGACGGCGGA-NAGAGAACTTCTTCAGCGTGTTCGAATCCGAGCTCGCCGACGTCGTGCCGGTGGTCAGGACGTCCATCGGCGGCACGAGGATCATCGGGAGGATGTGCGTCGGCAACAAGAACGGCCTCCTNCTGCCGCATACCACCACAGACCAAGAGCTCCAGCATC-TGAA-GAA-CAGCCTG-CCT-GA-TC-AGGTGGTCGTCCAGCGCATCGAGGAGCGCCTCTCCGCCCTGGGCAATTGCGTTGCCTGCAACGACCATGTCGCCCTCACACACCCAGACCTGGACCAGGGAACCGAGGAGATCATCTCAGATGTTCTTGGTGTGGAGGTGTTCAGGCAAACCATTGCAGGAAACATCCTGGTGGGGAGTTTCTG-CGCCTTTTCCAATAAAGGGGGCCTTGTTCACCCGCAGACGTCGGTGGAGGACCAGGCGGAGCTGTCGACGCTGCTGGAGGTGCCACTGGCCGCCGGGTCCATCAACCGGGGCAGCGAGGTGGTGGCCGCCGGCATGGCGGTGAACGACTGGGCGGCGTTCTGCGGCGCCGACACGACGGCGACGGAGCTGTCCGTGGTGGAGAGCGTGTTCCGGCTGAGGGACGGACGGCCGGGGGCGCTCGGCGCCGACATGAGCAGGTCGCTCGTCGTCAGCAGCTACCTATAGAGAGAGGAGGAGGGACCGGTTTTTGCTTTGGGGGATTTTCGGTCAGAATTCAAGAATGCTTAAAGCCAAAAATATCCCTTGCTGTATCTTGAGTAGTGACAGTAAATGTTCGCGTGGATCGATGCAGTTTTGATCCTGTGTCAAAGATGAATTTTGTATCTTTGCAAATCTGGAACGATGGAAGTGCTTTTTTGAAGTCAAAATATAATTTAGTATTATGCTCAGCTCAGGAAAGAATGTTGTCTTAAACCAGAATATTAAACAAAGTGAAGGTAGC] [+] EMBL AK103139 [CCCAACACAGCGACACCACCAGCGCCCACCTCCATCGCCGCCGCTCCCCTCGCCTCCCGCGGTTTACGCTCGCGCGCAGGAGTTCTTGGTTGGCTGACTGCGAGTAAGCGAATCATCCGGCAATCATGGCGTCCCGCGTCAGGTTTGAGAATTCCAGCGAGATTGGAGTGTTCGCGAGGCTCACCAACGCCTACTGCGTGCTCCCCGACGGCGGAGCAGAGAACTTCTTCAGCGTGTTCGAATCCGAGCTCGCCGACGTCGTGCCGGTGGTCAGGACGTCCATCGGCGGCACGAGGATCATCGGGAGGATGTGCGTCGGCAACAAGAACGGCCTCCTCCTGCCGCATACCACCACAGACCAAGAGCTCCAGCATC TGAA GAA CAGCCTG CCT GA TC AGGTGGTCGTCCAGCGCATCGAGGAGCGCCTCTCCGCCCTGGGCAATTGCGTTGCCTGCAACGACCATGTCGCCCTCACACACCCAGACCTGGACCAGGGAACCGAGGAGATCATCTCAGATGTTCTTGGTGTGGAGGTGTTCAGGCAAACCATTGCAGGAAACATCCTGGTGGGGAGTTTCTG CGCCTTTTCCAATAAAGGGGGCCTTGTTCACCCGCAGACGTCGGTGGAGGACCAGGCGGAGCTGTCGACGCTGCTGGAGGTGCCACTGGCCGCCGGGTCCATCAACCGGGGCAGCGAGGTGGTGGCCGCCGGCATGGCGGTGAACGACTGGGCGGCGTTCTGCGGCGCCGACACGACGGCGACGGAGCTGTCCGTGGTGGAGAGCGTGTTCCGGCTGAGGGACGGACGGCCGGGGGCGCTCGGCGCCGACATGAGCAGGTCGCTCGTCGTCAGCAGCTACCTATAGAGAGAGGAGGAGGGACCGGTTTTTGCTTTGGGGGATTTTCGGTCAGAATTCAAGAATGCTTAAAGCCAAAAATATCCCTTGCTGTATCTTGAGTAGTGACAGTAAATGTTCGCGTGGATCGATGCAGTTTTGATCCTGTGTCAAAGATGAATTTTGTATCTTTGCAAATCTGGAACGATGGAAGTGCTTTTTTGAAGTCAAAATATAATTTAGTATTATGCTCAGCTCAGGAAAGAATGTTGTCTTAAACCAGAATATTAAACAAAGTGAAGGTAGC] [+] EMBL OS1345A [ ACCAGCGCCCACCTCCATNGCCGCCGCTCCCCTCGTCTCCNGCGGTTTACGCTCGCGCGCAGGAGTTCTTGGTTGGCTGACTGCGAGTAAGCGAATCATCCGGCAATCATGGCGTCCCGCGTCAGGTTTGAGAATTCCAGCGAGATTGGAGTGTTCGCGAGGCTCACCAACGNCTACTGCGTGCTCCCCGACGGCGGA NAGAGAACTTCTTCAGCGTGTTCGAATCCGAGCTNGCCGACGTCGTGCCGNTGGTCAGGACGTCCATCGGCGNCACGAGGATCATCGNGAGGATGTGCGTCGGC ] [+] EMBL C26784 [ CCAGCGCCCACCTCCATCGCCGCCGCTCCCCTCGCCTCCCGCGGTTTACGCTCGCGCGCAGGAGTTCTTGGTTGGCTGACTGCGAGTAAGCGAATCATCCGGCAATCATGGCGTCCCGCGTCAGGTTTGAGAATTCCAGCGAGATTGGAGTNTTCGCGAGGCTCACCAACGCCTACTGCGTGCTCCCCGACGGCGGA NAGAGAACTTCTTCAGCGTGTTCGAATCCGAGCTCGCCGACGTCGTGCCGGTGGTCAGGACGTCCATCGGCGGCACGAGGATCATCGGGAGGATGTGCGTCGGCAACAAGAACGGCCTTCTNCTGCCGCATACCACCACAGACCAAGAGCTTCAGCATC TNAA GAA CAGCt ] [+] EMBL C28385 [ CCCCTCGCCTCCCGCGGTTTACGCTCGCGCGCAGGAGTTCTTGGTTGGCTGACTGCGAGTAAGCGAATCATCCGGCAATCATGGCGTCCCGCGTCAGGTTTGAGAATTCCAGCGAGATTGGAGTGTTCGCGAGGCTCACCAACGCCTACTGCGTGCTCCCCGACGGCGGA NAGAGAACTTCTTCAGCGTGTTCGAATCCGAGCTCGCCGACGTCGTGCCGGTGGTCAGGACGTCCATCGGCGGCACGAGGATCATCGGGAGGATGTGCGTCGGCAACAAGAACGGCCTCCTNCTGCCGCATACCACCACAGACCAAGAGCTNCAGCATCTTGAAGGAANAAGCCTGCCCTNGATTCAAGGTtggg ] [+] EMBL C98259 [ tTGGACCAGGAAACC AAGAGATCATCTC GATGTTCTTGTTNTGAAGTTNTTCAGGCAAACCATTGCAGGAAACATCTTGGTGGGGAGTTTCTGCCGCCTTTTCCAATAAAGGGGCCCTTGTTCACCCGCAGACGTCGGTGGAGGACCAGGCGGAGCTGTCGACGCTGCTGGAGGTGCCACTGGCCGCCGGGTCCATCAACCGGGGCAGCGAGGTGGTGGCCGCCGGCATGGCGGTGAACGACTGGGCGGCGTTCTGCGGCGCCGACACGACGGCGACGGAGCTGTCCGTGGTGGAGAGCGTGTTCCGGCTGAGGGACGGACGGCCGGGGGCGCTCGGCGCCGACATGAGCAGGTCGCTCGTCGTCAGCAGCTACCTATAGAGAGAGGAGGAGGGACCGGTTTTTGCTTTGGGGGATTTTCGGTCAGAATTCAAGAATGCTTAAAGCCAAAAATATCCCTTGCTGTATCTTGAGTAGTGACAGTAAATGTTCGCGTGGATCGATGCAGTTTTGATCCTGTGTCAAAGATGAATTTTGTATCTTTGCAAATCTGGAACGATGGAAGTGCTTTTTTGAAGTCAAAAaaa ] [-] EMBL CF324547 [ GCC GGGGCGCTCGGCGCCGACATGAGCAGGTCGCTCGTCGTCAGCAGCTACCTATAGAGA GAGGAGGGACCGGTTTTTGCTTTGGGGGATTTTCGGTCAGAATTCAAGAATGCTTAAAGCCAAAAATATCCCTTGCTGTATCTTGAGTAGTGACAGTAAATGTTCGCGTGGATCGATGCAGTTTTGATCCTGTGTCAAAGATGAATTTTGTATCTTTGCAAAaaaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||