These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9170#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1562 fasta sequence [AATGGCAAAATGATGCAGCAGATTGCTTGGGAGGCTTCTCCAGCTTTAGAGTCTTCTGAAAGATATGACCTATTGGATAATCATACCATGGATGCTTTAGCTGGAGGGATTGGCAATGCTACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAAAGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAAGCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCCAATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAATACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGTGGTGGTGATGTCGATGGACTAAT-GGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTTGATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCTGCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAACAGGAGGTCTGGTAGAAGAT-GGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATTCAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAAGGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTGGTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAAGTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACACAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAG-CCAACTAAAGAGGCAGCTGGTCAGTCA-GAAGACA-CCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTAGCTGGACCTAAAAGG-AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAA---TACAGCCTTCTCATGTATGTAGTGGTTCTAGCATTCATTTGGCCAGTCTTTTAACGGATTTTATACCCAT] [+] EMBL AK060399 [AATGGCAAAATGATGCAGCAGATTGCTTGGGAGGCTTCTCCAGCTTTAGAGTCTTCTGAAAGATATGACCTATTGGATAATCATACCATGGATGCTTTAGCTGGAGGGATTGGCAATGCTACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAAAGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAAGCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCCAATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAATACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGTGGTGGTGATGTCGATGGACTAAT GGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTTGATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCTGCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAACAGGAGGTCTGGTAGAAGAT GGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATTCAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAAGGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTGGTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAAGTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACACAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAG CCAACTAAAGAGGCAGCTGGTCAGTCA GAAGACA CCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTAGCTGGACCTAAAAGG AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACTTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAA TACAGCCTTCTCATGTATGTAGTGGTTCTAGCAT ] [+] EMBL CF325600 [ ATGGATGCTTTAGCTGGAGGGATTGGCAATGCTACCTTTGGCAAGAGTAAGAAAGGGAGATGTACTGATCTGTCATCATCATTAGGTAGGGAAAGCACTTCAGAATATGTTTCACTTGAGGATCTTGCACCATTAGCCATGGAAAAGATTGAAGCCCTTTCCATTGAGGGTCTGAGGATACAATCTGGCATGTCAGAAGAGGATGCACCCTCCAATATCAGTGCCCAGCCTATTGGGGAATTTTCCTCTCTGCAAGGAAAATGTGCAGGGAATACCCTCTCCCTTGGTTTAGAAGGAACCGCAGGGTTACAACTCCTGGATGTCAAACAAAGTGGTGGTGATGTCGATGGACTAATGGGGGTTGTCAATCACTCTTGATGAGTGGATGAGGCTTGATTCTGGCATAGTAGATGAAGATGAGCAGTTCACTGACCGGACGTCAAAGATACTTGCTGCTCACCATGCCAAATCAATGGAATTAGTTGCTGAAAACCAGAATGTGGACAAAAAGAACAGGAGGTCTGGTAGAAGATGGGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACG ] [+] EMBL CF306320 [ AAG ACAGGAGGTCTGGTAGAAGAT GGGGTTTGCTAGGGAACAACTTCACTGTTGCTCTCATGGTTCAACTGCGTGACCCACTACGTAACTATGAGCCAGTTGGCACGCCGATGCTTGCTTTAATTCAAGTGGAAAGGGTCTTCGTTCCCCCAAAGCCTAAGATATACAGTACTGTCACAGATAAAGGTAACAGTGAGCATGATGATGAGGAGCCCAAGACTGAAGAGGTACTAGAAAAAGCTTTGGTCAAGGAAGAAAAGATTGAGGAAGAAGAAGATTCTGTTCCACAATTTAAAGTCGCAGAAGTGCATGTAGCTGGTTTCAAGAGCGAGCCTGAGAAGACAAAATCATGGGGTAATCAAACACAGCAACAATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAG CCAACTAAAGAGGCAGCTGGTCAGTCA GAAGACA CCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAATTAGCTGGACCTAAAAGG AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGG ] [+] EMBL BQ906695 [ GTAATCAAACACAGCCAC ATCGGGATCAAGATGGCTGCTTGCAGCTGGCATGGGTAAGGGCAATAAGCATCCCCTGATGAAATCCAAAGCTATTGCGAAGCCCAACTANAGAGGCAGCTGGTCAGTCA GGAGACAGCCCTTTGGAGCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAGTTAGCTGGACCTAAAAGG AACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATAaaaaa ] [+] EMBL BI797744 [ TGGTCAGTCAGGAGGACA CCCTTTGGACCATTTCTTCACGCGTACATGGAGCTGGAACCAGATGGGGCGAGTTAGCTGGACCTAAAAGGTAACCCAAATATCCTCCTTCAAAAAGAAAAGCGATTTAGGTGATGGCTTGGCAATTATCAGTATTTAGCTCTTGTGATTTGCTGTCTTGGATGAATCTGTTCAGGGAAGAGTCTATTTATCTGGAACCTTGTCCTCACTGGAATACTTCTAGTGGACTGTTAATGTAAATGTAGTTCCTTTTTCTTGATACACCTTGAACCATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGC C ATAGCAATACTACAGCCTTCTCATGTAaaaa ] [+] EMBL AA752021 [ cgagCTTGAA CATCCAGGTACATGCACATGCTTCCGATCGGTTGTGCTCCTTTTCTCCTTGTACTTGGCTGTACTGAGAAACTGGTATTTCTCCTTTTCTTGTTACAATTGAAATAGTGGCTTTTTGCCTGTGAAGGCGCAATAGCAATACTACAGCCTTCTCATGTNTGTAGTGGTTCTAGCATTCATTTGGCCAGTCTTTTAACGGATTTTATACCCAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||