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Oryza sativa
cluster # 9193 cluster # 9193       Sequences # 6       consensus # 4


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9193#0 length = 897 sequences # 2  
consensus_9193#1 length = 842 sequences # 2  
consensus_9193#2 length = 742 sequences # 1  
consensus_9193#3 length = 683 sequences # 1  

consensusID : consensus_9193#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 897
fasta sequence
                              [AAGAAGGATGAGCCATTGGAAAGTGATTGCTTCAACATGGCTATACGAAAGTTCATGTATGAAAAAATCCAGACAATTCATAAAACTAAAGAAGCAATATCGAATCATTGCCTGGACTTGCAATTTTGGAGCGCTAGTGGCTTTGGTAAAGACCCGGTCCACCATGACAACGTACATCTTGAAAAGACCATTGGTAATTGGTCGGAAATTCATTACAAACTTTCACATTGCAAAGCGATTCTTATACCAGTACGCCATGCTCGAAGCTTTATCGTGCTCATAGTGGACCAATAAAGTCAAACACTCTATGTATTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAACATGAGATACACCAGAAAACTGATAACTATTTGTGACCACTTTAACAAAGCTATGAGGAAGGCATGCCCTGGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTATTTGTCAAT-ATCCGGTTTTCGACAGGAG-TTATCGGNGTTTTGTTGTTCATCTCTTCATGTGTACATGGAAAAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGGAAACTTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCACAAGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAATTACCGTATCTAGAAATGCTGGATGTTCCATATTTTTTGCTTGTGCTTTATTTGTATGACATCATCAAATTTTCATAGCTGTCTTCTATCTATGTTGCTTTTTATAATTTAATAAACGCCATGAGATTGTTTTATGCGCCAAAAAA]

[+] EMBL CF327882             [AAGAAGGATGAGCCATTGGAAAGTGATTGCTTCAACATGGCTATACGAAAGTTCATGTATGAAAAAATCCAGACAATTCATAAAACTAAAGAAGCAATATCGAATCATTGCCTGGACTTGCAATTTTGGAGCGCTAGTGGCTTTGGTAAAGACCCGGTCCACCATGACAACGTACATCTTGAAAAGACCATTGGTAATTGGTCGGAAATTCATTACAAACTTTCACATTGCAAAGCGATTCTTATACCAGTACGCCATGCTCGAAGCTTTATCGTGCTCATAGTGGACCAATAAAGTCAAACACTCTATGTATTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAACATGAGATACACCAGAAAACTGATAACTATTTGTGACCACTTTAACAAAGCTATGAGGAAGGCATGCCCTGGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTATTTGTCAAT ATCCGGTTTTCGACAGGAG TTATCGGNGTTTTGTTGTTCATCTCTTCATGTGTACATGGAAAAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGGAAACTTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCT                                                                                                                                                                                                                                                        ]
[-] EMBL CF327883             [                                                                                                                                                                                                                                                                                                                            cCCAAAATCCACTTATGCCAGAATATAAAAATAACCCAAACAT AGATACACCAGAAAACTGATAACTATTTGTGACCACTTTAACAAAGCTATGAGGAAGGCATGCCCTGGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTATTTGTCAATAATCCGGTTTTCGACAGGAGTTTATCGG GTTTTGTTGTTCATCTCTTCATGTGTACATGGAAAAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAA GGAAACTTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCACAAGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAATTACCGTATCTAGAAATGCTGGATGTTCCATATTTTTTGCTTGTGCTTTATTTGTATGACATCATCAAATTTTCATAGCTGTCTTCTATCTATGTTGCTTTTTATAATTTAATAAACGCCATGAGATTGTTTTATGCGCCAAAAAA]


>consensus_9193#0 AAGAAGGATGAGCCATTGGAAAGTGATTGCTTCAACATGGCTATACGAAAGTTCATGTAT GAAAAAATCCAGACAATTCATAAAACTAAAGAAGCAATATCGAATCATTGCCTGGACTTG CAATTTTGGAGCGCTAGTGGCTTTGGTAAAGACCCGGTCCACCATGACAACGTACATCTT GAAAAGACCATTGGTAATTGGTCGGAAATTCATTACAAACTTTCACATTGCAAAGCGATT CTTATACCAGTACGCCATGCTCGAAGCTTTATCGTGCTCATAGTGGACCAATAAAGTCAA ACACTCTATGTATTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAACATG AGATACACCAGAAAACTGATAACTATTTGTGACCACTTTAACAAAGCTATGAGGAAGGCA TGCCCTGGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTATTTGTCAATATC CGGTTTTCGACAGGAGTTATCGGNGTTTTGTTGTTCATCTCTTCATGTGTACATGGAAAA ATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGGAAACTTTTTTTT GCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCACA AGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGGAG TGATTTAATTTGAGGTGATCATCCATTAGAATTACCGTATCTAGAAATGCTGGATGTTCC ATATTTTTTGCTTGTGCTTTATTTGTATGACATCATCAAATTTTCATAGCTGTCTTCTAT CTATGTTGCTTTTTATAATTTAATAAACGCCATGAGATTGTTTTATGCGCCAAAAAA



consensusID : consensus_9193#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 842
fasta sequence
                              [TCATCTATGAAAAAATCGAGATGATTCATAAAACTAAAGAAGCAATATCGAATCATTGCTTGGACTTGCAATTTTGGAGTGCTACTGGCTTTGGTAAAGACCCGGTCCACCATGACAACATAAATCTTGCAGAGACCGTCGGTAGTTGGTCGGAAATTCATTACAAACTTTCACAGTGCAAAGCGATTCTTATACCAGTACGCCATGCTCGAAGTTTTATCGTGCTTGTAGTGGACCAAGAAAGTCAATCGCTCTATGTGTTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAATATGAGATCCACCAGAAAACTGATAACTATTTGTGATCACTTCAACAAAGCTATGAGAAAGGCATGCCCTAGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTAATTGTCAATAATCCGGTTTACAGCAGGAGTTTATCGGGTTTTCTTGTTCATCTCTTCATGTGTACATGGAATAATAAAGAACCACATTTGCCGGCAATTAATGATGGTGACGAGCTAAGGAAACTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAACATCCCTACCGGCGTACGAGATTTTCTAAAGTGTATAAAGAATTCACAACATTAGGGTAGTTATTTAACTATATGGAACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAAATGCCGTATCTCCAAATGCTGGATGTTCTATATTTTTTGTTTGTGCTTTATTTGTATGATATCATCAAAGTGTCATAGATGTCTTCTATTTATGTTGCTTTTTATAATTTATGTA]

[-] EMBL CB632686             [TCATCTATGAAAAAATCGAGATGATTCATAAAACTAAAGAAGCAATATCGAATCATTGCTTGGACTTGCAATTTTGGAGTGCTACTGGCTTTGGTAAAGACCCGGTCCACCATGACAACATAAATCTTGCAGAGACCGTCGGTAGTTGGTCGGAAATTCATTACAAACTTTCACAGTGCAAAGCGATTCTTATACCAGTACGCCATGCTCGAAGTTTTATCGTGCTTGTAGTGGACCAAGAAAGTCAATCGCTCTATGTGTTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAATATGAGATCCACCAGAAAACTGATAACTATTTGTGATCACTTCAACAAAGCTATGAGAAAGGCATGCCCTAGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTAATTGTCAATAATCCGGTTTACAGCAGGAGTTTATCGGGTTTTCTTGTTCATCTCTTCATGTGTACATGGAATAATAAAGAACCACATTTGCCGGCAATTAATGATGGTGACGAGCTAAGGAAACTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAACATCCCTACCGGCGTACGAGATTTTCTAAAGTGTATAAAGAATTCACAACATTAGGGTAGTTATTTAACTATATGGAACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAAATGCCGTATCTCCAAATGCTGGATGTTCTATATTTTTTGTTTGTGCTTTATTTGTATGATATCATCAAAGTGTCATAGATGTCTTCTATT                         ]
[-] EMBL CB634585             [                                                                                                                                                   GGTCGGAAATTCATTACAAACTTTCACAGTGCAAAGCGATTCTTATACCAGTACGCCATGCTGGAAGTTTTATCGTGCTTGTAGTGGACCAAGAAAGTCAAACGCTCTATGTGTTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAATATGAGATACACCAGAAAACTGATAACTATTTGTGATCACTTCAACAAAGCTATGAGAAAGGCATGCCCTAGCTCTAGGTGGAATGAAGCCATCAACTTGTGGAGGCAAGTAATTGTCAATAATCCGGTTTACAGCAGGAGTTTATCGGGTTTTCTTGTTCATCTCTTCATGTGTCCATGGAATAATAAAGACCCACATTTGCCGGCAATTAATGATGGTGACGAGCTAAGGAAACTTTTTTTGCTAAATCTACTGATGTCCCAACAAAATGAGTGTGAAAGCACCATCCCTAACGGCGTAGGAGATTTTTTAAAGTGTATAAAGAATTCACACCCTTAGGGTAGTTATTTACCTATATGGAACACCATTAGGGTTTACCTATAATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAAATGCCGTATCTACAAATGCTGGATGTTCTATATTTTTGGTTTGTGCTTTATTTGTATGATATCATCAAATTTTCATAGATGTCTTCTATCTATGTTGCTTTTTATAATTTATGTA]


>consensus_9193#1 TCATCTATGAAAAAATCGAGATGATTCATAAAACTAAAGAAGCAATATCGAATCATTGCT TGGACTTGCAATTTTGGAGTGCTACTGGCTTTGGTAAAGACCCGGTCCACCATGACAACA TAAATCTTGCAGAGACCGTCGGTAGTTGGTCGGAAATTCATTACAAACTTTCACAGTGCA AAGCGATTCTTATACCAGTACGCCATGCTCGAAGTTTTATCGTGCTTGTAGTGGACCAAG AAAGTCAATCGCTCTATGTGTTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACC CAAATATGAGATCCACCAGAAAACTGATAACTATTTGTGATCACTTCAACAAAGCTATGA GAAAGGCATGCCCTAGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTAATTG TCAATAATCCGGTTTACAGCAGGAGTTTATCGGGTTTTCTTGTTCATCTCTTCATGTGTA CATGGAATAATAAAGAACCACATTTGCCGGCAATTAATGATGGTGACGAGCTAAGGAAAC TTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAACATCCCTACCG GCGTACGAGATTTTCTAAAGTGTATAAAGAATTCACAACATTAGGGTAGTTATTTAACTA TATGGAACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCC ATTAGAAATGCCGTATCTCCAAATGCTGGATGTTCTATATTTTTTGTTTGTGCTTTATTT GTATGATATCATCAAAGTGTCATAGATGTCTTCTATTTATGTTGCTTTTTATAATTTATG TA



consensusID : consensus_9193#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 742
fasta sequence
                              [GGTACGAANTNGTGAANCCGCATTTAAATAGGGCATTGNTCTGCTGACNCATTGGGGTANGTTTGAAGNCCGTCCNCAGACAAGANTTTGAAGCCATGTAGTGTNGAAATTCATACAANTTCACTTGCAAGGATTTTAANCCGAACCCATGTTGGAGTTTTTGGGTCATGGGGNCCATAATTCAAACATTTTAGTATTGGACCNAATCAATTAGCCGGGATTTAAAATTACCCCAAACNGGAACNCCGGGAAACTGATAACTATTNGGGCCCACTTAACCAAGTTTGGGGAAGGCATGCCCTGGCTCTAGGTGGAAGGAGAACATCAAATTGTGGAGCCAAGTATTTGTCAATAATCCGGTTTTCGACAGGAGTTTATCGGGGTTTTGTTGTTCATCTCTTCATGTGAACATGGAAAAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGAAACTTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCACAAGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAATTACCGTATCTAGAAATGCTGGATGTTCCATATTTTTTGCTTGTGCTTTATTTGTATGACATCATCAAATTTTCATAGCTGTCTTCTATCTATGTTGCTTTTTATAATTTAATA]

[-] EMBL BE229270             [GGTACGAANTNGTGAANCCGCATTTAAATAGGGCATTGNTCTGCTGACNCATTGGGGTANGTTTGAAGNCCGTCCNCAGACAAGANTTTGAAGCCATGTAGTGTNGAAATTCATACAANTTCACTTGCAAGGATTTTAANCCGAACCCATGTTGGAGTTTTTGGGTCATGGGGNCCATAATTCAAACATTTTAGTATTGGACCNAATCAATTAGCCGGGATTTAAAATTACCCCAAACNGGAACNCCGGGAAACTGATAACTATTNGGGCCCACTTAACCAAGTTTGGGGAAGGCATGCCCTGGCTCTAGGTGGAAGGAGAACATCAAATTGTGGAGCCAAGTATTTGTCAATAATCCGGTTTTCGACAGGAGTTTATCGGGGTTTTGTTGTTCATCTCTTCATGTGAACATGGAAAAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGAAACTTTTTTTTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCACAAGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAATTACCGTATCTAGAAATGCTGGATGTTCCATATTTTTTGCTTGTGCTTTATTTGTATGACATCATCAAATTTTCATAGCTGTCTTCTATCTATGTTGCTTTTTATAATTTAATA]


>consensus_9193#2 GGTACGAANTNGTGAANCCGCATTTAAATAGGGCATTGNTCTGCTGACNCATTGGGGTAN GTTTGAAGNCCGTCCNCAGACAAGANTTTGAAGCCATGTAGTGTNGAAATTCATACAANT TCACTTGCAAGGATTTTAANCCGAACCCATGTTGGAGTTTTTGGGTCATGGGGNCCATAA TTCAAACATTTTAGTATTGGACCNAATCAATTAGCCGGGATTTAAAATTACCCCAAACNG GAACNCCGGGAAACTGATAACTATTNGGGCCCACTTAACCAAGTTTGGGGAAGGCATGCC CTGGCTCTAGGTGGAAGGAGAACATCAAATTGTGGAGCCAAGTATTTGTCAATAATCCGG TTTTCGACAGGAGTTTATCGGGGTTTTGTTGTTCATCTCTTCATGTGAACATGGAAAAAT AAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGAAACTTTTTTTTGCT AAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCACAAGA TTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGGAGTGA TTTAATTTGAGGTGATCATCCATTAGAATTACCGTATCTAGAAATGCTGGATGTTCCATA TTTTTTGCTTGTGCTTTATTTGTATGACATCATCAAATTTTCATAGCTGTCTTCTATCTA TGTTGCTTTTTATAATTTAATA



consensusID : consensus_9193#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 683
fasta sequence
                              [ATTTAACTATATGGAACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAAATGCCGTATCTACAAATGCTGGATGTTCTATATTTTTTGTTTGTGCTTTATTTGTATGATATCATCAAATTTTCACCTCGTGCCGAATTCGGCACGAGGCGCCTTCCTTTCCCACTCCACCTCATTTTTTCCCCTTCTCTTTACCCCATCTTTTCTCCACCTCCAACGGCTGAGACAGAGGTGACGACCTCGCAGGTGGGCGCCGCCGGTGAGCGACGAAGGCGGTCTTGGGTGCGGGCGGTGCTGACGCGCGGATCCAGCTGCACCCGTCCGAGAGAGCGGCGATGGTGGCCTTAGCGGAGGCGGAGGCACCCTTGGGGGTGAGGGGATCTGACTCCCCCGTCCTCGGGAGCGGCGGTGGTGTGCGGATCCGGCTGCCCCCCCCCTTAGAAGTGGCACCGTGGGTTGCGGCGGTGGCCGCTGCAACGACGATGAGGAGCTAGGGTTTTGGTAGAATGGAAATCTTGGATTTCTGCTAAATTTCTTTTGGGGAATTTTATTTTATTTTTTTTTCACTAAAACTATTTTTGTATGTGGTTGATATAGGTGCCCGCATATAAAAATCATGTTTTTCACATGCGGTTGGGTTTTAAATGGGAAAAAACAT]

[-] EMBL CB634044             [ATTTAACTATATGGAACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCCATTAGAAATGCCGTATCTACAAATGCTGGATGTTCTATATTTTTTGTTTGTGCTTTATTTGTATGATATCATCAAATTTTCACCTCGTGCCGAATTCGGCACGAGGCGCCTTCCTTTCCCACTCCACCTCATTTTTTCCCCTTCTCTTTACCCCATCTTTTCTCCACCTCCAACGGCTGAGACAGAGGTGACGACCTCGCAGGTGGGCGCCGCCGGTGAGCGACGAAGGCGGTCTTGGGTGCGGGCGGTGCTGACGCGCGGATCCAGCTGCACCCGTCCGAGAGAGCGGCGATGGTGGCCTTAGCGGAGGCGGAGGCACCCTTGGGGGTGAGGGGATCTGACTCCCCCGTCCTCGGGAGCGGCGGTGGTGTGCGGATCCGGCTGCCCCCCCCCTTAGAAGTGGCACCGTGGGTTGCGGCGGTGGCCGCTGCAACGACGATGAGGAGCTAGGGTTTTGGTAGAATGGAAATCTTGGATTTCTGCTAAATTTCTTTTGGGGAATTTTATTTTATTTTTTTTTCACTAAAACTATTTTTGTATGTGGTTGATATAGGTGCCCGCATATAAAAATCATGTTTTTCACATGCGGTTGGGTTTTAAATGGGAAAAAACAT]


>consensus_9193#3 ATTTAACTATATGGAACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGG TGATCATCCATTAGAAATGCCGTATCTACAAATGCTGGATGTTCTATATTTTTTGTTTGT GCTTTATTTGTATGATATCATCAAATTTTCACCTCGTGCCGAATTCGGCACGAGGCGCCT TCCTTTCCCACTCCACCTCATTTTTTCCCCTTCTCTTTACCCCATCTTTTCTCCACCTCC AACGGCTGAGACAGAGGTGACGACCTCGCAGGTGGGCGCCGCCGGTGAGCGACGAAGGCG GTCTTGGGTGCGGGCGGTGCTGACGCGCGGATCCAGCTGCACCCGTCCGAGAGAGCGGCG ATGGTGGCCTTAGCGGAGGCGGAGGCACCCTTGGGGGTGAGGGGATCTGACTCCCCCGTC CTCGGGAGCGGCGGTGGTGTGCGGATCCGGCTGCCCCCCCCCTTAGAAGTGGCACCGTGG GTTGCGGCGGTGGCCGCTGCAACGACGATGAGGAGCTAGGGTTTTGGTAGAATGGAAATC TTGGATTTCTGCTAAATTTCTTTTGGGGAATTTTATTTTATTTTTTTTTCACTAAAACTA TTTTTGTATGTGGTTGATATAGGTGCCCGCATATAAAAATCATGTTTTTCACATGCGGTT GGGTTTTAAATGGGAAAAAACAT



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9193#0      AAGAAGGATGAGCCATTGGAAAGTGATTGCTTCAACATGGCTATACGAAAGTTCATGTAT 60
consensus_9193#1      ----------------------------------------------------TCATCTAT 8
consensus_9193#2      ------------------------------------------------------------
consensus_9193#3      ------------------------------------------------------------
                                                                                  

consensus_9193#0      GAAAAAATCCAGACAATTCATAAAACTAAAGAAGCAATATCGAATCATTGCCTGGACTTG 120
consensus_9193#1      GAAAAAATCGAGATGATTCATAAAACTAAAGAAGCAATATCGAATCATTGCTTGGACTTG 68
consensus_9193#2      ----------------------------GGTACGAANTNGTGAANCCGCATTTAAA--TA 30
consensus_9193#3      -----------------------------------------ATTTAACTATATGGA---A 16
                                                                          *  *    

consensus_9193#0      CAATTTTGGAGCGCTAGTGGCTTTGGTAAAGACCCGGTCCACCATGACAACGTACATCTT 180
consensus_9193#1      CAATTTTGGAGTGCTACTGGCTTTGGTAAAGACCCGGTCCACCATGACAACATAAATCTT 128
consensus_9193#2      GGGCATTGNTCTGCTGACN-CATTGGGGTANGTTTGAAGNCCGTCCNCAGACAAGANTTT 89
consensus_9193#3      CAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCCA----TT 72
                           **               *  *                           *    **

consensus_9193#0      GAAAAGACCATTGGTAATTGGTCGGAAATTCATTACAAACTTTCACATTGCAAAGCGATT 240
consensus_9193#1      GCAGAGACCGTCGGTAGTTGGTCGGAAATTCATTACAAACTTTCACAGTGCAAAGCGATT 188
consensus_9193#2      GAAG---CCAT--GTAGTG---TNGAAATTCAT-ACAAN--TTCAC-TTGCAAG--GATT 135
consensus_9193#3      AGAAATGCCGT-----ATC---TACAAATGCTG---GATGTTCTATATTTTTTGTTTGTG 121
                        *    ** *      *       **** *      *   *  *   *         * 

consensus_9193#0      CTTATACCAGTACGCCATGCTCGAAGCTTTATCGTGCTCATAGTGGACCAATAAAGTCAA 300
consensus_9193#1      CTTATACCAGTACGCCATGCTCGAAGTTTTATCGTGCTTGTAGTGGACCAAGAAAGTCAA 248
consensus_9193#2      TTAANCCGAAC---CCATGTTGGAGTTTTTG----GGTCATGG-GGNCCA--TAATTCAA 185
consensus_9193#3      CTT-TATTTGTATGATATCATCAAATTTTCAC----CTCGTGCCGAATTC--GGCACGAG 174
                       *              **  *  *   **        *  *   *             * 

consensus_9193#0      ACACTCTATGTATTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAACATG 360
consensus_9193#1      TCGCTCTATGTGTTAGACCCAAATCCACTTATGCCAGAATATAAAAATAACCCAAATATG 308
consensus_9193#2      ACATTTTA-GTATTGGACCNAA--TCAATTA-GCCGGGATTTAAAATTACCCCAAACNGG 241
consensus_9193#3      GCGCCTTC-CTTTCCCACTCCACCTCATTTTTTCCC---CTTCTCTTTACCCCATCTTTT 230
                       *    *   * *   **   *   ** **   **      *     ** ****      

consensus_9193#0      AGATACACCAGAAAACTGATAACTATTTGTGACCACTTTAACAAAGCTATGAGGAAGGCA 420
consensus_9193#1      AGATCCACCAGAAAACTGATAACTATTTGTGATCACTTCAACAAAGCTATGAGAAAGGCA 368
consensus_9193#2      AA---CNCCGGGAAACTGATAACTATTNGGGCCCACTT-AACCAAGTT-TGGGGAAGGCA 296
consensus_9193#3      CTCCACCTCCAACGGCTGAGA--CAGAGGTGACGACCT---CGCAGGT--GGGCGCCGCC 283
                           *  *      **** *   *   * *   ** *   *  ** *  * *    ** 

consensus_9193#0      TGCCCTGGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTATTTGTCAATA-T 479
consensus_9193#1      TGCCCTAGCTCTAGGTGGAATGAAGACATCAACTTGTGGAGGCAAGTAATTGTCAATAAT 428
consensus_9193#2      TGCCCTGGCTCTAGGTGGAAGGAGAACATCAAATTGTGGAGCCAAGTATTTGTCAATAAT 356
consensus_9193#3      GGTGAGCGACGAAGGCGGTCTTGGGTGCGGGCGGTGCTGACGCGCGGATCCAGCTGCA-- 341
                       *     *    *** **                **  **  *  * *     *   *  

consensus_9193#0      CCGGTTTTCGACAGGAGTTATCGGNG-TTTTGTTGTTCATCTCTTCATGTGTACATGGAA 538
consensus_9193#1      CCGGTTTACAGCAGGAGTTTATCGGG-TTTTCTTGTTCATCTCTTCATGTGTACATGGAA 487
consensus_9193#2      CCGGTTTTCGACAGGAGTTTATCGGGGTTTTGTTGTTCATCTCTTCATGTGAACATGGAA 416
consensus_9193#3      CCCGTCCGAGAGAGCGGC-GATGGTGGCCTTAGCGGAGGCGG----AGGCACCCTTGGGG 396
                      ** **       **  *      * *   **   *           * *    * ***  

consensus_9193#0      AAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGGAAACTTTTTT 598
consensus_9193#1      TAATAAAGAACCACATTTGCCGGCAATTAATGATGGTGACGAGCTAAGGAAA--CTTTTT 545
consensus_9193#2      AAATAAAGAACCACATTTGTCGGCTATTAATGATAGTGACGAGCTAAGGAAA-CTTTTTT 475
consensus_9193#3      GTG-AGGGGATCTGACTCCCCCGTCCTCGGGAGCGGCGGTGGTGTGCGGA----TCCGGC 451
                          *  * * *  * *   * *   *        * *  *   *  **           

consensus_9193#0      TTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCA 658
consensus_9193#1      TTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAACATCCCTACCGGCGTA 605
consensus_9193#2      TTGCTAAATCTACTGATGTACCAACAAAATGAGTGTGAAAGCAATATTCCTAACGGCGCA 535
consensus_9193#3      TGCCCCCCCCCTTAGAAGTGGCACCGTG--GGTTGCGGCGGTGGCCGCTGCAACGACGAT 509
                      *  *     *    ** **  ** *     *  ** *   *          * ** **  

consensus_9193#0      CAAGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGG 718
consensus_9193#1      CGAGATTTTCTAAAGTGTATAAAGAATTCACAACATTAGGGTAGTTATTTAACTATATGG 665
consensus_9193#2      CAAGATTTTCTGAAGTGTATAAAAAATGCACAACATTAGGGTAGTTATTTAACTATATGG 595
consensus_9193#3      GAGGAG---CTAGGGTTTTGGTAGAATGGA-AATCTTGGATTTCTGCTAAATTTCTTTTG 565
                         **    **   ** *    * ***  * **  ** *  *  *  *  *  * * * *

consensus_9193#0      A-----------------------------GTGATTTAATTTGAGGTGATCATCCATTAG 749
consensus_9193#1      AACAACATTAGGGTTTAACTATAATATGGAGTGATTTAATTTGAGGTGATCATCCATTAG 725
consensus_9193#2      A-----------------------------GTGATTTAATTTGAGGTGATCATCCATTAG 626
consensus_9193#3      G-----------------------------GGAATTTTATTTTATTTTTTT-TTCACTAA 595
                                                    *  **** **** *  *  *  * ** ** 

consensus_9193#0      AATTACCGT-ATCTAGAAATGCTGGATGT-TCCATATTTTTTGCTTGTGCTTTATTTGTA 807
consensus_9193#1      AAATGCCGT-ATCTCCAAATGCTGGATGT-TCTATATTTTTTGTTTGTGCTTTATTTGTA 783
consensus_9193#2      AATTACCGT-ATCTAGAAATGCTGGATGT-TCCATATTTTTTGCTTGTGCTTTATTTGTA 684
consensus_9193#3      AACTATTTTTGTATGTGGTTGATATAGGTGCCCGCATATAAAAATCATGTTTTTCACATG 655
                      ** *    *  * *     ** *  * **  *   ** *     *  ** ***     * 

consensus_9193#0      TGAC--ATCATCAAATTTTCATAGCTGTCTTCTATCTATGTTGCTTTTTATAATTTAATA 865
consensus_9193#1      TGAT--ATCATCAAAGTGTCATAGATGTCTTCTATTTATGTTGCTTTTTATAATTTATGT 841
consensus_9193#2      TGAC--ATCATCAAATTTTCATAGCTGTCTTCTATCTATGTTGCTTTTTATAATTTAATA 742
consensus_9193#3      CGGTTGGGTTTTAAATGGGAAAAAACAT-------------------------------- 683
                       *        * ***     * *    *                                

consensus_9193#0      AACGCCATGAGATTGTTTTATGCGCCAAAAAA 897
consensus_9193#1      A------------------------------- 842
consensus_9193#2      --------------------------------
consensus_9193#3      --------------------------------
                                                      




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)