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Oryza sativa
cluster # 9195 cluster # 9195       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9195#0 length = 1475 sequences # 6  

consensusID : consensus_9195#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1475
fasta sequence
                              [AGCTGCAAATGTTGGTTCAAGTGATTATGAATATCTCCTCTCAATGGCAATTGGTACATTGACTCTGGAGAGGGTACAACAGCTCATTGCAGAGAAGGGCAGAATGGAGAATGAAGTAGCTGAACTGAAGAGAACAAGGCCAAAATCACTTTGGATGAGAGACCTTGATGCATTCGAGAAGGAACTGGATGCGCTTGATGAGAAGGACAGCATGGATGCTGAGGAGAGAAGAGCTACGAGGAATGCTGGAGGTGGCGCTGCACCTAATAAAGCAGCGCCCAAGAGACGACCTAGAAAGACAGCGACTAATACTCAGGCGGCAGAAAGCTCTGACGGGAATGCCGCTGCTCCGGCGGTTCCAAAACCTGCGGCACCACGTAAGAAACCAGCTGGAAAGGCAAGTTTGGCTGATAGCGAGGATGAAGATTATATAGCAGCAATCCCGAAACCTGCCGCACAGAAGAAGCAGCCAGCTAAGAAGGCAAGCACCCAGTTGAGTGATGACGAGGACGACGAAGTTCTTGCTCTAAAAGACCGATTGGCTGCTTACAATCTTGATGACCATTCCGAAGATACTGCTATGGAAACTGAGACTACAGAAGAACAGGCAAAAGGGAAGAAAGGGAGGAAGGAACCAAGCAAAAGAGGAGCAGCAAAGAAGGCCATATCATCCCTAGCTGTGATATCTGATGACGAGGAAGACGAAACAGTGCCCATCGATGAGGACGACGAGGATGATTTCGCCATGGAAGAAGTGCCGGTCAAGAAAGGTAGAGGAAAGAAGCCCGCCGCTGAGAAGCCGAAGGCTGCAACCAGGAAGAGGGCGCCAGCTCAGGGGAAGTCCATGAGGCAGAAAGTGATGGAAGAAATGTTCAAGCC-TACAGAGGAC-AGCAGCACCAGCGCTCCATCTCCTGAGAAGAAGGTGCGCAAGATGAGGGCCTCTCCCTTCC-ACAAGAAGAGCGGCTCTGTCTTGCAGAGGGCCTCAACAGCTTCCACGAGCACTGAAGAAACCGAGTCATCCTCCCCATCAGGTAGCTCTGCCGAGCCAGTCGCAGCGAGGCCGAAACGGCAAACACGGGGGAACAAGAAGAGTTACCAGGAGGTGCAGGAGCTGAGCGATGATGACACTGAGGACGAAGTGCAGGATATCAGCGATGATTCCGACTTCGCCGGCTCTGACTTTGGCGAGGACGACGACTGAATGTCCCCTGAATTTAACTACTGGAACAATGTAGGATCAACTCCGTAGCGAGCGGTGTGACTGTCTGCCTGTTTGCTGAGTCGTTAGATTGATTGACCTGTCTGTTACATTGGTGATGCTTGCTGAGATGCATCTCTTGTGCGTCGTGTGCTCTATTCAGTTCATCAGTTGCTGAGACATTGATCCGTGTAACTTACTTGACACTTGTGCTTTGTGTGATCAGCATGGGTTTTTCAGCTGTGTGTAAAAAAAAAAAAAAAAAAACTCGAAACTA]

[+] EMBL AK063335             [AGCTGCAAATGTTGGTTCAAGTGATTATGAATATCTCCTCTCAATGGCAATTGGTACATTGACTCTGGAGAGGGTACAACAGCTCATTGCAGAGAAGGGCAGAATGGAGAATGAAGTAGCTGAACTGAAGAGAACAAGGCCAAAATCACTTTGGATGAGAGACCTTGATGCATTCGAGAAGGAACTGGATGCGCTTGATGAGAAGGACAGCATGGATGCTGAGGAGAGAAGAGCTACGAGGAATGCTGGAGGTGGCGCTGCACCTAATAAAGCAGCGCCCAAGAGACGACCTAGAAAGACAGCGACTAATACTCAGGCGGCAGAAAGCTCTGACGGGAATGCCGCTGCTCCGGCGGTTCCAAAACCTGCGGCACCACGTAAGAAACCAGCTGGAAAGGCAAGTTTGGCTGATAGCGAGGATGAAGATTATATAGCAGCAATCCCGAAACCTGCCGCACAGAAGAAGCAGCCAGCTAAGAAGGCAAGCACCCAGTTGAGTGATGACGAGGACGACGAAGTTCTTGCTCTAAAAGACCGATTGGCTGCTTACAATCTTGATGACCATTCCGAAGATACTGCTATGGAAACTGAGACTACAGAAGAACAGGCAAAAGGGAAGAAAGGGAGGAAGGAACCAAGCAAAAGAGGAGCAGCAAAGAAGGCCATATCATCCCTAGCTGTGATATCTGATGACGAGGAAGACGAAACAGTGCCCATCGATGAGGACGACGAGGATGATTTCGCCATGGAAGAAGTGCCGGTCAAGAAAGGTAGAGGAAAGAAGCCCGCCGCTGAGAAGCCGAAGGCTGCAACCAGGAAGAGGGCGCCAGCTCAGGGGAAGTCCATGAGGCAGAAAGTGATGGAAGAAATGTTCAAGCC TACAGAGGAC AGCAGCACCAGCGCTCCATCTCCTGAGAAGAAGGTGCGCAAGATGAGGGCCTCTCCCTTCC ACAAGAAGAGCGGCTCTGTCTTGCAGAGGGCCTCAACAGCTTCCACGAGCACTGAAGAAACCGAGTCATCCTCCCCATCAGGTAGCTCTGCCGAGCCAGTCGCAGCGAGGCCGAAACGGCAAACACGGGGGAACAAGAAGAGTTACCAGGAGGTGCAGGAGCTGAGCGATGATGACACTGAGGACGAAGTGCAGGATATCAGCGATGATTCCGACTTCGCCGGCTCTGACTTTGGCGAGGACGACGACTGAATGTCCCCTGAATTTAACTACTGGAACAATGTAGGATCAACTCCGTAGCGAGCGGTGTGACTGTCTGCCTGTTTGCTGAGTCGTTAGATTGATTGACCTGTCTGTTACATTGGTGATGCTTGCTGAGATGCATCTCTTGTGCGTCGTGTGCTCTATTCAGTTCATCAGTTGCTGAGACATTGATCCGTGTAA                                                                                  ]
[+] EMBL AU062764             [                                                                                                                                                                                                                                                                                                                    ATACTCAGGCGGCAGAAAGCTCNNACGGGAATGCCGCTGCTCCGGCGGTTCCAAAACCTGCGGNACCACGTAAGAAACCAGCTGGAAAGGCAAGTTTGGCTGATAGCGAGGATGAAGATTATATAGCAGCAATCNCGAAACCTGCCGCACAGAAGANGCAGCCANCTAAGACGGCAAGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ]
[+] EMBL CA999316             [                                                                                                                                                                                                                                                                                                                                                  ATGCCGCTGCTCCGGCGGTTCCAAAACCTGCGGCACCACGTAAGAAACCAGCTGGAAAGGCAAGTTTGGCTGATAGCGAGGATGAAGATTATATAGCAGCAATCCCGAAACCTGCCGCACAGAAGAAGCAGCCAGCTAAGAAGGCAAGCACCCAGTTGAGTGATGACGAGGACGACGAAGTTCTTGCTCTAAAAGACCGATTGGCTGCTTACAATCTTGATGACCATTCCGAAGATACTGCTATGGAAACTGAGACTACAGAAGAACAGGCAAAAGGGAAGAAAGGGAGGAAGGAACCAAGCAAAAGAGGAGCAGCAAAGAAGGCCATATCATCCCTAGCTGTGATATCTGATGACGAGGAAGACGAAACAGTGCCCATCGATGAGGACGACGAGGAT                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      ]
[+] EMBL CF327985             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                            catAGGCAAGCACCCAGTTGAGTGATGACGAGGACGACGAAGTTCTTGCTCTAAAAGACCGATTGGCTGCTTACAATCTTGATGACCATTCCGAAGATACTGCTATGGAAACTGAGACTACAGAAGAACAGGCAAAAGGGAAGAAAGGGAGGAAGGAACCAAGCAAAAGAGGAGCAGCAAAGAAGGCCATATCATCCCTAGCTGTGATATCTGATGACGAGGAAGACGAAACAGTGCCCATCGATGAGGACGACGAGGATGATTTCGCCATGGAAGAAGTGCCGGTCAAGAAAGGTAGAGGAAAGAAGCCCGCCGCTGAGAAGCCGAAGGCTGCAACCAGGAAGAGGGCGCCAGCTCAGGGGAAGTCCATGAGGCAGAAAGTGATGGAAGAAATGTTCAAGCC TACAGAGGAC AGCAGCACCAGCGCTCCATCTCCTGAGAAGAAGGTGCGCAAGATGAGGGCCTCTCCCTTCC ACAAGAAGAGCGGCTCTGTCTTGCAGAGGGCCTCAACAGCTTCCACGAGCACTGAAGAAACCGAGTCATCCTCCCCATCAGGTAGCTCTGCCGAGCCAGTCGCAGCGAGGCCGAAACGGCAAACACGGGGGAACAAGAAGAGTTACCAGGAGGTGCAGGAGCTGAGCG                                                                                                                                                                                                                                                                                                                                                                     ]
[-] EMBL CF327986             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                        GCAACCAGGAAGAGGGCGCCAGCTCAGGGGAAGTCCATGAGGCAGAAAGTGATGGAAGAAATGTTCAAGCC TACAGAGGAC AGCAGCACCAGCGCTCCATCTCCTGAGAAGAAGGTGCGCAAGATGAGGGCCTCTCCCTTCC ACAAGAAGAGCGGCTCTGTCTTGCAGAGGGCCTCAACAGCTTCCACGAGCACTGAAGAAACCGAGTCATCCTCCCCATCAGGTAGCTCTGCCGAGCCAGTCGCAGCGAGGCCGAAACGGCAAACACGGGGGAACAAGAAGAGTTACCAGGAGGTGCAGGAGCTGAGCGATGATGACACTGAGGACGAAGTGCAGGATATCAGCGATGATTCCGACTTCGCCGGCTCTGACTTTGGCGAGGACGACGACTGAATGTCCCCTGAATTTAACTACTGGAACAATGTAGGATCAACTCCGTAGCGAGCGGTGTGACAGTCTGCCTGTTTGCTGAGTCGTTAGATTGATTGACCTGTCTGTTACATTGGTGATGCTTGCTGAGATGCATCTCTTGTGCGTCGTGTGCTCTATTCAGTTCATCAGTTGCTGAGAaaaaa                                                                                            ]
[-] EMBL CA753544             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                gnAGAGG  GCCAGCTCAGGGG AGTCCATGAAGCAGAAAGTGATGGAAGAAATGNTC AGCCTTACAGA GACAAGCAGCACCAGCGCTCCATCTCCTGAGAAGAA GTGCGCAAGATGAGNGCCTCT CCTTCCAACAAGAAGAGCGGCTCTGTCTTGCAGAGGGCCTCAACAGCTTCCACGAGCACTGAAGAAACCGAGTCATCCTCCCCATCAGGTAGCTCTGCCGAGCCAGTCGCAGCGAGGCCGAAACGGCAAACACGGGGGAACAAGAAGAGTTACCAGGAGGTGCAGGAGCTGAGCGATGATGACACTGAGGACGAAGTGCAGGATATCAGCGATGATTCCGACTTCGCCGGCTCTGACTTTGGCGAGGACGACGACTGAATGTCCCCTGAATTTAACTACTGGAACAATGTAGGATCAACTCCGTAGCGAGCGGTGTGACTGTCTGCCTGTTTGCTGAGTCGTTAGATTGATTGACCTGTCTGTTACATTGGTGATGCTTGCTGAGATGCATCTCTTGTGCGTCGTGTGCTCTATTCAGTTCATCAGTTGCTGAGACATTGATCCGTGTAACTTACTTGACACTTGTGCTTTGTGTGATCAGCATGGGTTTTTCAGCTGTGTGTAAAAAAAAAAAAAAAAAAACTCGAAACTA]


>consensus_9195#0 AGCTGCAAATGTTGGTTCAAGTGATTATGAATATCTCCTCTCAATGGCAATTGGTACATT GACTCTGGAGAGGGTACAACAGCTCATTGCAGAGAAGGGCAGAATGGAGAATGAAGTAGC TGAACTGAAGAGAACAAGGCCAAAATCACTTTGGATGAGAGACCTTGATGCATTCGAGAA GGAACTGGATGCGCTTGATGAGAAGGACAGCATGGATGCTGAGGAGAGAAGAGCTACGAG GAATGCTGGAGGTGGCGCTGCACCTAATAAAGCAGCGCCCAAGAGACGACCTAGAAAGAC AGCGACTAATACTCAGGCGGCAGAAAGCTCTGACGGGAATGCCGCTGCTCCGGCGGTTCC AAAACCTGCGGCACCACGTAAGAAACCAGCTGGAAAGGCAAGTTTGGCTGATAGCGAGGA TGAAGATTATATAGCAGCAATCCCGAAACCTGCCGCACAGAAGAAGCAGCCAGCTAAGAA GGCAAGCACCCAGTTGAGTGATGACGAGGACGACGAAGTTCTTGCTCTAAAAGACCGATT GGCTGCTTACAATCTTGATGACCATTCCGAAGATACTGCTATGGAAACTGAGACTACAGA AGAACAGGCAAAAGGGAAGAAAGGGAGGAAGGAACCAAGCAAAAGAGGAGCAGCAAAGAA GGCCATATCATCCCTAGCTGTGATATCTGATGACGAGGAAGACGAAACAGTGCCCATCGA TGAGGACGACGAGGATGATTTCGCCATGGAAGAAGTGCCGGTCAAGAAAGGTAGAGGAAA GAAGCCCGCCGCTGAGAAGCCGAAGGCTGCAACCAGGAAGAGGGCGCCAGCTCAGGGGAA GTCCATGAGGCAGAAAGTGATGGAAGAAATGTTCAAGCCTACAGAGGACAGCAGCACCAG CGCTCCATCTCCTGAGAAGAAGGTGCGCAAGATGAGGGCCTCTCCCTTCCACAAGAAGAG CGGCTCTGTCTTGCAGAGGGCCTCAACAGCTTCCACGAGCACTGAAGAAACCGAGTCATC CTCCCCATCAGGTAGCTCTGCCGAGCCAGTCGCAGCGAGGCCGAAACGGCAAACACGGGG GAACAAGAAGAGTTACCAGGAGGTGCAGGAGCTGAGCGATGATGACACTGAGGACGAAGT GCAGGATATCAGCGATGATTCCGACTTCGCCGGCTCTGACTTTGGCGAGGACGACGACTG AATGTCCCCTGAATTTAACTACTGGAACAATGTAGGATCAACTCCGTAGCGAGCGGTGTG ACTGTCTGCCTGTTTGCTGAGTCGTTAGATTGATTGACCTGTCTGTTACATTGGTGATGC TTGCTGAGATGCATCTCTTGTGCGTCGTGTGCTCTATTCAGTTCATCAGTTGCTGAGACA TTGATCCGTGTAACTTACTTGACACTTGTGCTTTGTGTGATCAGCATGGGTTTTTCAGCT GTGTGTAAAAAAAAAAAAAAAAAAACTCGAAACTA



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)