cluster # 9197

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Oryza sativa
cluster # 9197 cluster # 9197 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9197#0 length = 1592 sequences # 6
consensusID : consensus_9197#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1592
fasta sequence
                              [TCGCCTCATGATCAAAAAAAAAAAAAAAAAACAGAAGTTGAACACGCCTCCCCCCTTGGCTCGTCGCCGACGCCTCCACCACCCTCGCGTTTCCCACCCGATTCCACCCCGAAACCCCTCAAATCGAGCGCGAATTCCTCTCCAATAGCTGCGGCTCCAGCCTCCGGTGGATTCTGGTCTCGCCGGATTCGAGCTCTGGTCGGCGGAGAGCACCGGATCCGGAGGTCACGCGGGCAATTGGTGTGCCCCGGAAGAACAAGAACCGGGAGACCATGCAGTACCAACCCCTCGACAGCAGCGGCACTGATGACGACCTTCCTCCGACATACCAACCTAGAGGACCAAGAGTGATTTTCAATGGAAATGGATCACTTCCTCAACCAAACCTACACAGCAACGTGGACAGAGAAATACGTCAGATCGAGCAACAAGCGTACACTGGTGTTCTCAGAGCATTTAAAGTGCAGTCTGATGCTATAACTTGGGAGAAAGAAAGTCTAATAACTGAACTGAGGAAAGAATTGCAAATTTCTGATAAGGAACACCGAGTGCTCTTAAAAGGGGTTACTGAAGAGGAGGCTGTCTGTAGAATAAGGCAATCAAGACAGACAGGTGGAACACAGTCCAGCTCTCACCATAGCAGTGTAGTTCATACTCCGGTACCTGCAAAGAGGCAGAAGAAATCCCATTCAGTCCCTGTGACCCCCCAGGCCCCTGTCATTACTATGCATGCAGTGGTGGGCAAGAAGGGTGGTCGGCAGGCATCTGATCGTGTATTGAAGCGGCTTCCTAGCAATAATAGTCCTATGTTGGGTTCAAGCAGGAGAAGAGGAAGGCTACA-CCCAAATGAACTGATAAAGGGATATTCTCCATTAGATGGGTTTGGCATACCTAATACCGGCAATGTTGTAATGGAGGTTGAGAAGGTATTATCCAATCCAAATATGCTTGAAATTGAGAAGGCAATGAAACTTCTTAGAGATCAGGAGCAATCATTGCTTGATGCAATTGCAAGACTTGACGAAGCATCTGATGGTGAAAATGAAGATATTGTGCTCGTTGCAAGCCAACTAGGTACTACCGTTGCATGACATCGGTGGTCATGGCATCACTTGCTGGTGACGTCTTGAGCTTTAGAACTGCAGGCACTAACTGGATACCCACTTCAGACGGTGGGTGAAGATGGAAACTCATGTGAAGAATGCAAGGTCGGCCAGATATATTGGTCGACATGAATTGTGAATTTGTGGTTGGAATATATATTGTTAGAGATCTCCATATCTTGTATTGTTGCAATGGTATTTTCTTTGCAAATGTAGAGATAACTGCCCTAAAAATAGAGCGTAGATGAAA-CCCCCTTTCTCCTTCAGAAATGGGGACATAAATTAGTAGGTTGTAAATTATTTGCTTCTGTGCCATCCGTGCCTGCAAAGAAATTGCGGCACTGTACAGTATGCAGCGCGCTATCCTGTATCAAGAAAATTATTTTATGAATCCTGTGACTAATATGAATCTGT-GT-AAAAAGGTTTGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK070907             [TCGCCTCATGATCAAAAAAAAAAAAAAAAAACAGAAGTTGAACACGCCTCCCCCCTTGGCTCGTCGCCGACGCCTCCACCACCCTCGCGTTTCCCACCCGATTCCACCCCGAAACCCCTCAAATCGAGCGCGAATTCCTGTCCAATAGCTGCGGCTCCAGCCTCCGGTGGATTCTGGTCTCGCCGTATTCGAGCTCTGGTCGGCGGAGAGCACCGGATCCGGAGGTCACGCGGGCAATTGGTGTGCCCCGGAAGAACAAGAACCGGGAGACCATGCAGTACCAACCACTCGACAGCAGCGGCACTGATGACGACCTTCCTCCGACATACCAACCTAGAGGACCAAGAGTGATTTTCAATGGAAATGGATCACTTCCTCAACCAAACCTACACAGCAACGTGGACAGAGAAATACGTCAGATCGAGCAACAAGCGTACACTGGTGTTCTCAGAGCATTTAAAGTGCAGTCTGATGCTATAACTTGGGAGAAAGAAAGTCTAATAACTGAACTGAGGAAAGAATTGCAAATTTCTGATAAGGAACACCGAGTGCTCTTAAAAGGGGTTACTGAAGAGGAGGCTGTCTGTAGAATAAGGCAATCAAGACAGACAGGTGGAACACAGTCCAGCTCTCACCATAGCAGTGTAGTTCATACTCCGGTACCTGCAAAGAGGCAGAAGAAATCCCATTCAGTCCCTGTGACCCCCCAGGCCCCTGTCATTACTATGCATGCAGTGGTGGGCAAGAAGGGTGGTCGGCAGGCATCTGATCGTGTATTGAAGCGGCTTCCTAGCAATAATAGTCCTATGTTGGGTTCAAGCAGGAGAAGAGGAAGGCTACA CCCAAATGAACTGATAAAGGGATATTCTCCATTAGATGGGTTTGGCATACCTAATACCGGCAATGTTGTAATGGAGGTTGAGAAGGTATTATCCAATCCAAATATGCTTGAAATTGAGAAGGCAATGAAACTTCTTAGAGATCAGGAGCAATCATTGCTTGATGCAATTGCAAGACTTGACGAAGCATCTGATGGTGAAAATGAAGATATTGTGCTCGTTGCAAGCCAACTAGGTACTACCGTTGCATGACATCGGTGGTCATGGCATCACTTGCTGGTGACGTCTTGAGCTTTAGAACTGCAGGCACTAACTGGATACCCACTTCAGACGGTGGGTGAAGATGGAAACTCATGTGAAGAATGCAAGGTCGGCCAGATATATTGGTCGACATGAATTGTGAATTTGTGGTTGGAATATATATTGTTAGAGATCTCCATATCTTGTATTGTTGCAATGGTATTTTCTTTGCAAATGTAGAGATAACTGCCCTAAAAATAGAGCGTAGATGAAA CCCCCTTTCTCCTTCAGAAATGGGGACATAAATTAGTAGGTTGTAAATTATTTGCTTCTGTGCCATCCGTGCCTGCAAAGAAATTGCGGCACTGTACAGTATGCAGCGCGCTATCCTGTATCAAGAAAATTATTTTATGAATCCTGTGACTAATATGAATCTGT GT AAAAA                                                                    ]
[+] EMBL AK100370             [                                                   CCCCTTGGCTCGTCGCCGACGCCTCCACCACCCTCGCGTTTCCCACCCGATTCCACCCCGAAACCCCTCAAATCGAGCGCGAATTCCTCTCCAATAGCTGCGGCTCCAGCCTCCGGTGGATTCTGGTCTCGCCGGATTCGAGCTCTGGTCGGCGGAGAGCACCGGATCCGGAGGTCACGCGGGCAATTGGTGTGCCCCGGAAGAACAAGAACCGGGAGACCATGCAGTACCAACCCCTCGACAGCAGCGGCACTGATGACGACCTTCCTCCGACATACCAACCTAGAGGACCAAGAGTGATTTTCAATGGAAATGGATCACTTCCTCAACCAAACCTACACAGCAACGTGGACAGAGAAATACGTCAGATCGAGCAACAAGCGTACACTGGTGTTCTCAGAGCATTTAAAGTGCAGTCTGATGCTATAACTTGGGAGAAAGAAAGTCTAATAACTGAACTGAGGAAAGAATTGCAAATTTCTGATAAGGAACACCGAGTGCTCTTAAAAGGGGTTACTGAAGAGGAGGCTGTCTGTAGAATAAGGCAATCAAGACAGACAGGTGGAACACAGTCCAGCTCTCACCATAGCAGTGTAGTTCATACTCCGGTACCTGCAAAGAGGCAGAAGAAATCCCATTCAGTCCCTGTGACCCCCCAGGCCCCTGTCATTACTATGCATGCAGTGGTGGGCAAGAAGGGTGGTCGGCAGGCATCTGATCGTGTATTGAAGCGGCTTCCTAGCAATAATAGTCCTATGTTGGGTTCAAGCAGGAGAAGAGGAAGGCTACA CCCAAATGAACTGATAAAGGGATATTCTCCATTAGATGGGTTTGGCATACCTAATACCGGCAATGTTGTAATGGAGGTTGAGAAGGTATTATCCAATCCAAATATGCTTGAAATTGAGAAGGCAATGAAACTTCTTAGAGATCAGGAGCAATCATTGCTTGATGCAATTGCAAGACTTGACGAAGCATCTGATGGTGAAAATGAAGATATTGTGCTCGTTGCAAGCCAACTAGGTACTACCGTTGCATGACATCGGTGGTCATGGCATCACTTGCTGGTGACGTCTTGAGCTTTAGAACTGCAGGCACTAACTGGATACCCACTTCAGACGGTGGGTGAAGATGGAAACTCATGTGAAGAATGCAAGGTCGGCCAGATATATTGGTCGACATGAATTGTGAATTTGTGGTTGGAATATATATTGTTAGAGATCTCCATATCTTGTATTGTTGCAATGGTATTTTCTTTGCAAATGTAGAGATAACTGCCCTAAAAATAGAGCGTAGATGAAA CCCCCTTTCTCCTTCAGAAATGGGGACATAAATTAGTAGGTTGTAAATTATTTGCTTCTGTGCCATCCGTGCCTGCAAAGAAATTGCGGCACTGTACAGTATGCAGCGCGCTATCCTGTATCAAGAAAATTATTTTATGAATCCTGTGACTAATATGAATCTGT GT AAAAAGGTTT                                                               ]
[+] EMBL CB645192             [                                                                                                         ACCCCGAAACCCCTCAAATCGAGCGCGAATTCCTCTCCAATAGCTGCGGCTCCAGCCTCCGGTGGATTCTGGTCTCGCCGGATTCGAGCTCTGGTCGGCGGAGAGCACCGGATCCGGAGGTCACGCGGGCAATTGGTGTGCCCCGGAAGAACAAGAACCGGGAGACCATGCAGTACCAACCCCTCGACAGCAGCGGCACTGATGACGACCTTCCTCCGACATACCAACCTAGAGGACCAAGAGTGATTTTCAATGGAAATGGATCACTTCCTCAACCAAACCTACACAGCAACGTGGACAGAGAAATACGTCAGATCGAGCAACAAGCGTACACTGGTGTTCTCAGAGCATTTAAAGTGCAGTCTGATGCTATAACTTGGGAGAAAGAAAGTCTAATAACTGAACTGAGGAAAGAATTGCAAATTTCTGATAAGGAACACCGAGTGCTCTTAAAAGGGGTTACTGAAGAGGAGGCTGTCTGTAGAATAAGGCAATCAAGACAGACAGGTGGAACACAGTCCAGCTCTCACCATAGCAGTGTAGTTCATACTCCGGTACCTGCAAAGAGGCAGAAGAAATCCCATTCAGTCCCTGTGACCCCCCAGGCCCCTGTCATTACTATGCATGCAGTGGTGGGCAAGAAGGGTGGTCGGCAGGCATCTGATCGTGTATTGAAGCGGCTTCCTAGCAATAATAGTCCTATGTTGGGTTCAAGCAGGAGAAGAGGAAGGCTACACCCCAAATGAACTGATAAAGGGATATTCTCCATTAGATGGGTTTGGCA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   ]
[+] EMBL CA766036             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              AGACAAGGGGAACACAGTCCAGCTCTCACCATAGCAGTGTAGTTCATACTCCGGTACCTGCAAAGAGGCAGAAGAAATCCCATTCAGTCCCTGTGACCCCCCAGGCCCCTGTCATTACTATGCATGCAGTGGTGGGCAAGAAGGGTGGTCGGCAGGCATCTGATCGTGTATTGAAGCGGCTTCCTAGCAATAATAGTCCTATGTTGGGTTCAAGCAGGAGAAGAGGAAGGCTACA CCCAAATGAACTGATAAAGAGATATTCTCCATTAGATGGGTTTGGCATACCTAATACCGGCAATGTTGTAATGGAGGTTGAGAAGGTATTATCCAATCCAAATATGCTTGAAATTGAGAAGGCAATGAAACTTCTTAGAGATCAGGAGCAATCATTGCTTGATGCAATTGCAAGACTTGACGAAGCATCTGATGGTGAAAATGAAGATATTGTGCTCGTTGCAAGCCAACTAGGTACTACCGTTGCATGACATCGGTGGTCATGGCATCACTTGCTGGTGACGTCTTGAGCTTTAGAACTGCAGGCACTAACTGGATACCCACTTCAGACGGTGGGTGAAGATGGAAACTCATGTGAAGAATGCAAGGTCAGCCAGATATATTGGTCGACATGAATTGTGAATTTGTGGTTGGAATATATATTGGTAGAGATCTCCATATCTTGNATTGGTGCAATGGTATTTTCTTTGCAAATGTAGAGATAACTGCCCTAAAAATAGAGCGTAGATGAAACCCCCCTTTCTNCTTCAGAAATGGGGACATAAATTAGTAGGNTGNAAAATATTTGCTTCTGNGCCATCCGNGCCTGCAAAGAAAATGCGGCACTGTCCAGTATGCAGCGCGCTATCCTGGATCAA NAAATTATT                                                                                                           ]
[+] EMBL BM421602             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  ccgATCGGTGGTCATGGCATCACTTGCTGGTGACGTCTTGAGCTTTAGAACTGCAGGCACTAACTGGATACCCACTTCAGACGGTGGGTGAAGATGGAAACTCATGTGAAGAATGCAAGGTCGGCCAGATATATTGGTCGACATGAATTGTGAATTTGTGGTTGGAATATATATTGTTAGAGATCTCCATATCTTGTATTGTTGCCATGGTATTTTCTNTGCAAATGTAGAGATAACTGCCCTAAAAATAGAGCGTAGATGAAA CCCCCTTTCTCCTTCAGAAATGGGGACATAAATTAGTAGGTTGTAAATTATTTGCTTCTGTGCCATCCGTGCCTGC AAGAAATTGCGGC CTGTACAGTATGCAGCGCGCTATCCTGTATCAAGAAAATTATTTTATGAATCCTGTGACTAATATGAATCTGTNCTCAANAAGGTTTGGAGAAAAAAAAAA                                                 ]
[+] EMBL CF328086             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          TTATTTGCTTCTGTGCCATCCGTGCCTGCAAAGAAATTGCGGCACTGTACAGTATGCAGCGCGCTATCCTGTATCAAGAAAATTATTTTATGAATCCTGTGACTAATATGAATCTGT GT AAAAAGGTTTGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9197#0
TCGCCTCATGATCAAAAAAAAAAAAAAAAAACAGAAGTTGAACACGCCTCCCCCCTTGGC
TCGTCGCCGACGCCTCCACCACCCTCGCGTTTCCCACCCGATTCCACCCCGAAACCCCTC
AAATCGAGCGCGAATTCCTCTCCAATAGCTGCGGCTCCAGCCTCCGGTGGATTCTGGTCT
CGCCGGATTCGAGCTCTGGTCGGCGGAGAGCACCGGATCCGGAGGTCACGCGGGCAATTG
GTGTGCCCCGGAAGAACAAGAACCGGGAGACCATGCAGTACCAACCCCTCGACAGCAGCG
GCACTGATGACGACCTTCCTCCGACATACCAACCTAGAGGACCAAGAGTGATTTTCAATG
GAAATGGATCACTTCCTCAACCAAACCTACACAGCAACGTGGACAGAGAAATACGTCAGA
TCGAGCAACAAGCGTACACTGGTGTTCTCAGAGCATTTAAAGTGCAGTCTGATGCTATAA
CTTGGGAGAAAGAAAGTCTAATAACTGAACTGAGGAAAGAATTGCAAATTTCTGATAAGG
AACACCGAGTGCTCTTAAAAGGGGTTACTGAAGAGGAGGCTGTCTGTAGAATAAGGCAAT
CAAGACAGACAGGTGGAACACAGTCCAGCTCTCACCATAGCAGTGTAGTTCATACTCCGG
TACCTGCAAAGAGGCAGAAGAAATCCCATTCAGTCCCTGTGACCCCCCAGGCCCCTGTCA
TTACTATGCATGCAGTGGTGGGCAAGAAGGGTGGTCGGCAGGCATCTGATCGTGTATTGA
AGCGGCTTCCTAGCAATAATAGTCCTATGTTGGGTTCAAGCAGGAGAAGAGGAAGGCTAC
ACCCAAATGAACTGATAAAGGGATATTCTCCATTAGATGGGTTTGGCATACCTAATACCG
GCAATGTTGTAATGGAGGTTGAGAAGGTATTATCCAATCCAAATATGCTTGAAATTGAGA
AGGCAATGAAACTTCTTAGAGATCAGGAGCAATCATTGCTTGATGCAATTGCAAGACTTG
ACGAAGCATCTGATGGTGAAAATGAAGATATTGTGCTCGTTGCAAGCCAACTAGGTACTA
CCGTTGCATGACATCGGTGGTCATGGCATCACTTGCTGGTGACGTCTTGAGCTTTAGAAC
TGCAGGCACTAACTGGATACCCACTTCAGACGGTGGGTGAAGATGGAAACTCATGTGAAG
AATGCAAGGTCGGCCAGATATATTGGTCGACATGAATTGTGAATTTGTGGTTGGAATATA
TATTGTTAGAGATCTCCATATCTTGTATTGTTGCAATGGTATTTTCTTTGCAAATGTAGA
GATAACTGCCCTAAAAATAGAGCGTAGATGAAACCCCCTTTCTCCTTCAGAAATGGGGAC
ATAAATTAGTAGGTTGTAAATTATTTGCTTCTGTGCCATCCGTGCCTGCAAAGAAATTGC
GGCACTGTACAGTATGCAGCGCGCTATCCTGTATCAAGAAAATTATTTTATGAATCCTGT
GACTAATATGAATCTGTGTAAAAAGGTTTGGAGAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
clustalw multiple alignements is not computed in this case