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Oryza sativa
cluster # 9214 cluster # 9214       Sequences # 6       consensus # 3


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9214#0 length = 2361 sequences # 4  
consensus_9214#1 length = 604 sequences # 1  
consensus_9214#2 length = 411 sequences # 1  

consensusID : consensus_9214#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 4
consensus length = 2361
fasta sequence
                              [CCTTCCCCATCCTCCTCCCCATTGCGCTGGGTAGGATTCCAATGTGGGGGACTAGGGTTTAGGGTTTGGAGTCAATCCCAGACCGCGCCCATGACGTCCTCGTCTCGAGTAAGGGTTGGCAATCTAGTCCCCCTCAATGAAGGAAATGCGAGCTCGTCAAATGGATCGGTGTCAAGCATTCCTATCTATCTGGGTGCCAATGTTGTAGGGAGGAATCATTTGGTGGTCGTCGACAAGAGAGTCAGCCGCAAGCATCTGAGCCTACATGCCTCGGCGGATGGTTCCATTGAAGCGGTAGTGGAAGGACCAAATCCTATCATTGTTCGATC-TGA-GGGCCAGAGGAGGAAGGTC-TGTGCTCAAGAGAGAGTAAAGATTGCACATGATGATGTCCTGGAACTCATCCCTGGTGAATATTTTGTGAAGTATTTGAATGTGGGCGATAACCATAAAAGTTCCACATCAATGGGTTCAAGTGATTTTAAAAAGGGGAAGAGGCTCTGTGAGGATGATACTGTAGTTATCAAAAGAAATCGTCAGATTATGGAAGATGAGGCTTTGGCAAGAAGTTTACAGAAAAGCTTTGCAGAAGAAAGTTCAACTATTTCCGGTTTGGGTTGTGATCAAATGTTAAGTTCACTTGATAGTGCTGGTTTTTCTGAGAGAAATAACGAGAGAATACACTCTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTTCGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAAGATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAATGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGAGAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCACAAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCTGCTTGTATATCCTCAAGGGATTCGTGTTGTTGTGCACACAGCAAATTTGATACATGTCGACTGGAATAACAAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGAATAGAAGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGTGGCCTGAGTTCAGGGTAAATTTACCAGTGGTTGGTGATGTCAACATCAATGCAGCATTCTTTAGGAAGTTTGATTATAAGAGCTCATCGGTCAGGTTGATTGGATCCGTTCCTGGTTATCATGTTGGCCCCAATATTAAAAAGTGGGGTCATATGAAGCTTAGGAGTGTTCTTGAAGGGTGCACATTTGAACAACAGTTTTGCAAGGCTCCCATGATTTATCAGTTCTCTTCCTTGGGGTCACTTGATGAGAAATGGATGAGTGAGTTTGCATTCTCACTATCAGCTGGTAAATCAGATAATGGTTCACCTTTGGGTATTGGTAAACCACTGATTGTCTGGCCTACAGTGGAGGATGTTAGGACATCAATAGAGGGTTATGCAGCTGGTAGTTGCATTCCAAGCCCTCAAAAGAATGTTGAAAAAGATTTCTTGAGGAAGTATTGGGCCAGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGATGCCTCACATAAAAACTTTTACTCGATACAATGGTCAAGACATTGCATGGTTTCTACTAACCTCGGCAAATTTAAGCAAAGCTGCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATACGCTCATATGAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCATGTACGGGGAAGAACAATTCAAACCTGAATAACCTGGCCCCTGGGAAAGAGATCAAAACCAAACTG-GTCACACTCTGCTGGAAAAGCGACGAAGAAAAAGAACAATCCA-CGGAAATTATCAGATTGCCAGTGCCATATCAACTTCCTCCAAAGCCTTACGGCACAGAAGATGTCCCATGGTCTTGGGACAAGAGGTACACAAAGAAGGACTTGTATGGTTCAGTCTGGCCGCGCCATGGTTAGCTAAGCGGTATGCGGACAATATATGATCAATGAAAGGCTAACCCTGCTCCGATGTCGACAACAAGAAGGCCGGTAGCTGATCGCCTGTCAGTGCCCACTACTCAACCATTAGCAGGAAGTAGTACTATTTCCTGGGAGAGATTAGATATTTCTATTACTAATTTGTACGAGCACAGGATATTTTCTTTCTTGTTGGTACGAATCGTGTGCCTTGTCTGCTAAAAAAAGTGATGTTTATGCCTCCATCCTCTTTTA]

[+] EMBL AK069279             [CCTTCCCCATCCTCCTCCCCATTGCGCTGGGTAGGATTCCAATGTGGGGGACTAGGGTTTAGGGTTTGGAGTCAATCCCAGACCGCGCCCATGACGTCCTCGTCTCGAGTAAGGGTTGGCAATCTAGTCCCCCTCAATGAAGGAAATGCGAGCTCGTCAAATGGATCGGTGTCAAGCATTCCTATCTATCTGGGTGCCAATGTTGTAGGGAGGAATCATTTGGTGGTCGTCGACAAGAGAGTCAGCCGCAAGCATCTGAGCCTACATGCCTCGGCGGATGGTTCCATTGAAGCGGTAGTGGAAGGACCAAATCCTATCATTGTTCGATC TGA GGGCCAGAGGAGGAAGGTC TGTGCTCAAGAGAGAGTAAAGATTGCACATGATGATGTCCTGGAACTCATCCCTGGTGAATATTTTGTGAAGTATTTGAATGTGGGCGATAACCATAAAAGTTCCACATCAATGGGTTCAAGTGATTTTAAAAAGGGGAAGAGGCTCTGTGAGGATGATACTGTAGTTATCAAAAGAAATCGTCAGATTATGGAAGATGAGGCTTTGGCAAGAAGTTTACAGAAAAGCTTTGCAGAAGAAAGTTCAACTATTTCCGGTTTGGGTTGTGATCAAATGTTAAGTTCACTTGATAGTGCTGGTTTTTCTGAGAGAAATAACGAGAGAATACACTCTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTTCGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAAGATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAATGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGAGAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCACAAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCTGCTTGTATATCCTCAAGGGATTCGTGTTGTTGTGCACACAGCAAATTTGATACATGTCGACTGGAATAACAAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGAATAGAAGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGTGGCCTGAGTTCAGGGTAAATTTACCAGTGGTTGGTGATGTCAACATCAATGCAGCATTCTTTAGGAAGTTTGATTATAAGAGCTCATCGGTCAGGTTGATTGGATCCGTTCCTGGTTATCATGTTGGCCCCAATATTAAAAAGTGGGGTCATATGAAGCTTAGGAGTGTTCTTGAAGGGTGCACATTTGAACAACAGTTTTGCAAGGCTCCCATGATTTATCAGTTCTCTTCCTTGGGGTCACTTGATGAGAAATGGATGAGTGAGTTTGCATTCTCACTATCAGCTGGTAAATCAGATAATGGTTCACCTTTGGGTATTGGTAAACCACTGATTGTCTGGCCTACAGTGGAGGATGTTAGGACATCAATAGAGGGTTATGCAGCTGGTAGTTGCATTCCAAGCCCTCAAAAGAATGTTGAAAAAGATTTCTTGAGGAAGTATTGGGCCAGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGATGCCTCACATAAAAACTTTTACTCGATACAATGGTCAAGACATTGCATGGTTTCTACTAACCTCGGCAAATTTAAGCAAAGCTGCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATACGCTCATATGAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCATGTACGGGGAAGAACAATTCAAACCTGAATAACCTGGCCCCTGGGAAAGAGATCAAAACCAAACTG GTCACACTCTGCTGGAAAAGCGACGAAGAAAAAGAACAATCCA CGGAAATTATCAGATTGCCAGTGCCATATCAACTTCCTCCAAAGCCTTACGGCACAGAAGATGTCCCATGGTCTTGGGACAAGAGGTACACAAAGAAGGACGTGTATGGTTCAGTCTGGCCGCGCCATGGTTAGCTAAGCGGTATGCGGACAATATATGATCAATGAAAGGCTAACCCTGCTCCGATGTCGACAACAAGAAGGCCGGTAGCTGATCGCCTGTCAGTGCCCACTACTCAACCATTAGCAGGAAGTAGTACTATTTCCTGGGAGAGATTAGATATTTCTATTACTAATTTGTACGAGCACAGGATATTTTCTTTCTTGTTGGTACGAATCGTGTGCCTTGTCTGCTTCCGATCGTGATGTTTATGCCTCCATCCTCTTTTA]
[+] EMBL C28270               [                                       CAATGTGGGGGACTAGGGTTTAGGGTTTGGAGTCAATCCCAGACCGCGCCCATGACGTCCTCGTCTCGAGTAAGGGTTGGCAATCTAGTCCCCCTCAATGAAGGAAATGCGAGCTCGTCAAATGGATCGGTGTCAAGCATTCCTATCTATCTGGGTGCCAATGTTGTAGGGAGGAATCATTTGGTGGTCGTCGACAAGAGAGTCAGCCGCAAGCATCTGAGCCTACATGCCTCGGCGGATGGTTTCATTGAAGCGGTAGTGGAAGGACCAAATCCTATCATTGTTCGATCTTTAGGGGCCAGAGGAGGAAGGTCTTTTGNTCAAGAGAGAGTA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          ]
[+] EMBL CF331127             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              ACAACTGATGATACGCTCATATGAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCATGTACGGGGAAGAACAATTCAAACCTGAATAACCTGGCCCCTGGGAAAGAGATCAAAACCATTTTG TTCACACTCTGCTGGAAAAGCGACGAAGAAAAAGAACAATTCATCTGAAATTATCAGATTGCCAGTGCCATATCAACTTCCTCCAAAGCCTTACGGCACAGAAGATGTCCCATGGTCTTGGGACAAGAGGTACACAAAGAAGGACTTGTATGGTTCAGTCTGGCCGCGCCATGGTTAGCTAAGCGGTATGCGGACAATATATGATCAATGAAAGGCTAACCCTGCTCCGATGTCGACAACAAGAAGGCCGGTAGCTGATCGCCTGTCAGTGCCCACTACTCAACCATTAGCAGGAAGTAGTACTATTTCCTGGGAGAGATTAGATATTTCTATTACTAATTTGTACGAGCACAGGATATTTTCTTTCTTGTTGGTACGAATCGTGTGCCTTGTCTGCTAAAAAAA                            ]
[-] EMBL CF331126             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             CTCATATGAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCATGTACGGGGAAGAACAATTCAAACCTGAATAACCTGGCCCCTGGGAAAGAGATCAAAACCAAACTGTGTCACACTCTGCTGGAAAAGCGACGAAGAAAAAGAACAATCCA CGGAAATTATCAGATTGCCAGTGCCATATCAACTTCCTCCAAAGCCTTACGGCACAGAAGATGTCCCATGGTCTTGGGACAAGAGGTACACAAAGAAGGACTTGTATGGTTCAGTCTGGCCGCGCCATGGTTAGCTAAGCGGTATGCGGACAATATATGATCAATGAAAGGCTAACCCTGCTCCGATGTCGACAACAAGAAGGCCGGTAGCTGATCGCCTGTCAGTGCCCACTACTCAACCATTAGCAGGAAGTAGTACTATTTCCTGGGAGAGATTAGATATTTCTATTACTAATTTGTACGAGCACAGGATATTTTCTTTCTTGTTGGTACGAATCGTGTGCCTTGTCTGCTAAAAAAAa                           ]


>consensus_9214#0 CCTTCCCCATCCTCCTCCCCATTGCGCTGGGTAGGATTCCAATGTGGGGGACTAGGGTTT AGGGTTTGGAGTCAATCCCAGACCGCGCCCATGACGTCCTCGTCTCGAGTAAGGGTTGGC AATCTAGTCCCCCTCAATGAAGGAAATGCGAGCTCGTCAAATGGATCGGTGTCAAGCATT CCTATCTATCTGGGTGCCAATGTTGTAGGGAGGAATCATTTGGTGGTCGTCGACAAGAGA GTCAGCCGCAAGCATCTGAGCCTACATGCCTCGGCGGATGGTTCCATTGAAGCGGTAGTG GAAGGACCAAATCCTATCATTGTTCGATCTGAGGGCCAGAGGAGGAAGGTCTGTGCTCAA GAGAGAGTAAAGATTGCACATGATGATGTCCTGGAACTCATCCCTGGTGAATATTTTGTG AAGTATTTGAATGTGGGCGATAACCATAAAAGTTCCACATCAATGGGTTCAAGTGATTTT AAAAAGGGGAAGAGGCTCTGTGAGGATGATACTGTAGTTATCAAAAGAAATCGTCAGATT ATGGAAGATGAGGCTTTGGCAAGAAGTTTACAGAAAAGCTTTGCAGAAGAAAGTTCAACT ATTTCCGGTTTGGGTTGTGATCAAATGTTAAGTTCACTTGATAGTGCTGGTTTTTCTGAG AGAAATAACGAGAGAATACACTCTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTT CGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAA GATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAA TGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGA GAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCAC AAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCTGCTTGTATAT CCTCAAGGGATTCGTGTTGTTGTGCACACAGCAAATTTGATACATGTCGACTGGAATAAC AAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGAATAGA AGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGTGGCCTGAGTTC AGGGTAAATTTACCAGTGGTTGGTGATGTCAACATCAATGCAGCATTCTTTAGGAAGTTT GATTATAAGAGCTCATCGGTCAGGTTGATTGGATCCGTTCCTGGTTATCATGTTGGCCCC AATATTAAAAAGTGGGGTCATATGAAGCTTAGGAGTGTTCTTGAAGGGTGCACATTTGAA CAACAGTTTTGCAAGGCTCCCATGATTTATCAGTTCTCTTCCTTGGGGTCACTTGATGAG AAATGGATGAGTGAGTTTGCATTCTCACTATCAGCTGGTAAATCAGATAATGGTTCACCT TTGGGTATTGGTAAACCACTGATTGTCTGGCCTACAGTGGAGGATGTTAGGACATCAATA GAGGGTTATGCAGCTGGTAGTTGCATTCCAAGCCCTCAAAAGAATGTTGAAAAAGATTTC TTGAGGAAGTATTGGGCCAGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGATGCCT CACATAAAAACTTTTACTCGATACAATGGTCAAGACATTGCATGGTTTCTACTAACCTCG GCAAATTTAAGCAAAGCTGCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATA CGCTCATATGAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTT TCATGTACGGGGAAGAACAATTCAAACCTGAATAACCTGGCCCCTGGGAAAGAGATCAAA ACCAAACTGGTCACACTCTGCTGGAAAAGCGACGAAGAAAAAGAACAATCCACGGAAATT ATCAGATTGCCAGTGCCATATCAACTTCCTCCAAAGCCTTACGGCACAGAAGATGTCCCA TGGTCTTGGGACAAGAGGTACACAAAGAAGGACTTGTATGGTTCAGTCTGGCCGCGCCAT GGTTAGCTAAGCGGTATGCGGACAATATATGATCAATGAAAGGCTAACCCTGCTCCGATG TCGACAACAAGAAGGCCGGTAGCTGATCGCCTGTCAGTGCCCACTACTCAACCATTAGCA GGAAGTAGTACTATTTCCTGGGAGAGATTAGATATTTCTATTACTAATTTGTACGAGCAC AGGATATTTTCTTTCTTGTTGGTACGAATCGTGTGCCTTGTCTGCTAAAAAAAGTGATGT TTATGCCTCCATCCTCTTTTA



consensusID : consensus_9214#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 604
fasta sequence
                              [CTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTTCGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAAGATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAATGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGAGAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCACAAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCTGCTTGTATATCCTCAAGGGATTCGTGTTGTTGTGCACACAGCAAATTTGATACATGTCGACTGGAATAACAAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGAATAGAAGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGGTAGCAGCTAGCAGGGCACTTGTCTTTGCTTCTTGATTAACGTATCACTCCAATTGTGTTTCACTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AU082643             [CTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTTCGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAAGATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAATGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGAGAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCACAAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCTGCTTGTATATCCTCAAGGGATTCGTGTTGTTGTGCACACAGCAAATTTGATACATGTCGACTGGAATAACAAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGAATAGAAGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGGTAGCAGCTAGCAGGGCACTTGTCTTTGCTTCTTGATTAACGTATCACTCCAATTGTGTTTCACTTTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA]


>consensus_9214#1 CTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTTCGGCTCATGCGTGTCCAAGGTC TTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAAGATGTCATACAGGGTGAAGTGC TTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAATGGCTGCTTACAGCATGTCCAA GCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGAGAAGATGGTGCATCAGTGGAGC TTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCACAAGCCTCCACTTCCAATTTCAT TTGGAACACATCATTCAAAGGCCATGCTGCTTGTATATCCTCAAGGGATTCGTGTTGTTG TGCACACAGCAAATTTGATACATGTCGACTGGAATAACAAAACTCAGGGGCTATGGATGC AAGATTTTCCCTGGAAAGATGCAAAAGATGTGAATAGAAGTGTTTCCTTTGAAAACGATT TGGTTGATTATCTGAGTGCAATTAAGGTAGCAGCTAGCAGGGCACTTGTCTTTGCTTCTT GATTAACGTATCACTCCAATTGTGTTTCACTTTTTTAAAAAAAAAAAAAAAAAAAAAAAA AAAA



consensusID : consensus_9214#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 411
fasta sequence
                              [AGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGATGCCTCACATAAAAACTTTTACTCGATACAATGGTCAAGACATTGCATGGTTTCTACTAACCTCGGCAAATTTAAGCAAAGCTGCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATACGCTCATATGAGGTGGATGATTTTGTTCCATTGTTGAATTGAGGAAATTTTCTGAACATCCAGACTTTTACAGGAAAACTGCTCTGCAACATAGTGTTGGTCATCATGGAATCGTAGCTTATACCTTGCCATTTGATCTCTTTTCAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCATGTACGGGGAAGAACAATTCAAACCTGGTACTATCTAATTTCTCCAGCGGC]

[-] EMBL AU225329             [AGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGATGCCTCACATAAAAACTTTTACTCGATACAATGGTCAAGACATTGCATGGTTTCTACTAACCTCGGCAAATTTAAGCAAAGCTGCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATACGCTCATATGAGGTGGATGATTTTGTTCCATTGTTGAATTGAGGAAATTTTCTGAACATCCAGACTTTTACAGGAAAACTGCTCTGCAACATAGTGTTGGTCATCATGGAATCGTAGCTTATACCTTGCCATTTGATCTCTTTTCAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCATGTACGGGGAAGAACAATTCAAACCTGGTACTATCTAATTTCTCCAGCGGC]


>consensus_9214#2 AGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGATGCCTCACATAAAAACTTTTACT CGATACAATGGTCAAGACATTGCATGGTTTCTACTAACCTCGGCAAATTTAAGCAAAGCT GCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATACGCTCATATGAGGTGGAT GATTTTGTTCCATTGTTGAATTGAGGAAATTTTCTGAACATCCAGACTTTTACAGGAAAA CTGCTCTGCAACATAGTGTTGGTCATCATGGAATCGTAGCTTATACCTTGCCATTTGATC TCTTTTCAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCACAATTTTCA TGTACGGGGAAGAACAATTCAAACCTGGTACTATCTAATTTCTCCAGCGGC



consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9214#0      CCTTCCCCATCCTCCTCCCCATTGCGCTGGGTAGGATTCCAATGTGGGGGACTAGGGTTT 60
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AGGGTTTGGAGTCAATCCCAGACCGCGCCCATGACGTCCTCGTCTCGAGTAAGGGTTGGC 120
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AATCTAGTCCCCCTCAATGAAGGAAATGCGAGCTCGTCAAATGGATCGGTGTCAAGCATT 180
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      CCTATCTATCTGGGTGCCAATGTTGTAGGGAGGAATCATTTGGTGGTCGTCGACAAGAGA 240
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      GTCAGCCGCAAGCATCTGAGCCTACATGCCTCGGCGGATGGTTCCATTGAAGCGGTAGTG 300
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      GAAGGACCAAATCCTATCATTGTTCGATCTGAGGGCCAGAGGAGGAAGGTCTGTGCTCAA 360
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      GAGAGAGTAAAGATTGCACATGATGATGTCCTGGAACTCATCCCTGGTGAATATTTTGTG 420
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AAGTATTTGAATGTGGGCGATAACCATAAAAGTTCCACATCAATGGGTTCAAGTGATTTT 480
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AAAAAGGGGAAGAGGCTCTGTGAGGATGATACTGTAGTTATCAAAAGAAATCGTCAGATT 540
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      ATGGAAGATGAGGCTTTGGCAAGAAGTTTACAGAAAAGCTTTGCAGAAGAAAGTTCAACT 600
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      ATTTCCGGTTTGGGTTGTGATCAAATGTTAAGTTCACTTGATAGTGCTGGTTTTTCTGAG 660
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AGAAATAACGAGAGAATACACTCTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTT 720
consensus_9214#1      ----------------------CTGTTGATTATCTGAAAGATGTACTTTCATTGACTTTT 38
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      CGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAA 780
consensus_9214#1      CGGCTCATGCGTGTCCAAGGTCTTCCTTCATGGACTAATACTTCCTCAGTTACCATTCAA 98
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      GATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAA 840
consensus_9214#1      GATGTCATACAGGGTGAAGTGCTTCTTGCTGTACTCTCAAATTATATGGTGGACATGGAA 158
consensus_9214#2      -------------------------------------------AGGTGGAAAGCGGACCA 17
                                                                 *  ***    *     *

consensus_9214#0      TGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGA 900
consensus_9214#1      TGGCTGCTTACAGCATGTCCAAGCTTAAGGAAAGTTCGACATGTCCTAGTTATACATGGA 218
consensus_9214#2      TGTGGGTCGTTGTCGTGCGATGCCTCACATAAAA----ACTTTTACTCGATACA-ATGGT 72
                      **   *       * **      ** *   ***     ** * * ** * ** * **** 

consensus_9214#0      GAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCAC 960
consensus_9214#1      GAAGATGGTGCATCAGTGGAGCTTCTGAAGAAAGTGAAGCCAGCCAATTGGATCCTTCAC 278
consensus_9214#2      CAAGACATTGCAT------GGTTTCT------ACTAACCTCGGCAAATTTAA------GC 114
                       ****   *****       * ****      * * *   * ** ****  *       *

consensus_9214#0      AAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCT--GCTTGTAT 1018
consensus_9214#1      AAGCCTCCACTTCCAATTTCATTTGGAACACATCATTCAAAGGCCATGCT--GCTTGTAT 336
consensus_9214#2      AAAGCTGC---TTGGGGTGCGTTGCAGAAGAATAATACACAACTGATGATACGCTCATAT 171
                      **  ** *   *     * * **    *   ** ** ** *    *** *  ***  ***

consensus_9214#0      ATCCTCAAGGGATTCGTGTTGTTGT-GCACACAGCAAATTTGATACATGTC--GACTGGA 1075
consensus_9214#1      ATCCTCAAGGGATTCGTGTTGTTGT-GCACACAGCAAATTTGATACATGTC--GACTGGA 393
consensus_9214#2      GAGGTGGATGATTTTGTTCCATTGTTGAATTGAGGAAATTTTCTGAACATCCAGACTTTT 231
                          *  * *  ** **    **** * *   ** ******  *  *  **  ****   

consensus_9214#0      ATAACAAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGA 1135
consensus_9214#1      ATAACAAAACTCAGGGGCTATGGATGCAAGATTTTCCCTGGAAAGATGCAAAAGATGTGA 453
consensus_9214#2      ACAGGAAAACTGCTCTGCAACATA-GTGTTGGTCATCATGGAATCGTAGCTTATACCTTG 290
                      * *  ******     ** *   * *      *   * *****   *     * *  *  

consensus_9214#0      ATAGAAGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGTGGCCTG 1195
consensus_9214#1      ATAGAAGTGTTTCCTTTGAAAACGATTTGGTTGATTATCTGAGTGCAATTAAGGTAGCAG 513
consensus_9214#2      CCATTTG-ATCTCTTTT-----CAGTTAGGTGTACTGTTCTTGCCCAA--AACTCACCAA 342
                        *   *  * ** ***     *  ** ***  * * *    *  ***  **     *  

consensus_9214#0      AGTTCAGGGTAAATTTACCAGTGGTTGGTGATGTCAACATCAATGCAGCATTCTTTAGGA 1255
consensus_9214#1      CTAGCAGGGC--ACTTGTCTTTGCTTCTTGATTAACGTATCACTCCAATTGTGTTTCACT 571
consensus_9214#2      TCTGTACCAC--AATTTTCA-TGTACGGGGAAGAACAATTCAAACCTGGTACTATCTAAT 399
                           *      * **  *  **      **        ***   *        *     

consensus_9214#0      AGTTTGATTATAAGAGCTCATCGGTCAGGTTGATTGGATCCGTTCCTGGTTATCATGTTG 1315
consensus_9214#1      TTTTTAAAAAAAAAAAAAAAAAAAAAAAAAAAA--------------------------- 604
consensus_9214#2      TTCTCCAGCGGC------------------------------------------------ 411
                         *  *                                                     

consensus_9214#0      GCCCCAATATTAAAAAGTGGGGTCATATGAAGCTTAGGAGTGTTCTTGAAGGGTGCACAT 1375
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      TTGAACAACAGTTTTGCAAGGCTCCCATGATTTATCAGTTCTCTTCCTTGGGGTCACTTG 1435
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      ATGAGAAATGGATGAGTGAGTTTGCATTCTCACTATCAGCTGGTAAATCAGATAATGGTT 1495
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      CACCTTTGGGTATTGGTAAACCACTGATTGTCTGGCCTACAGTGGAGGATGTTAGGACAT 1555
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      CAATAGAGGGTTATGCAGCTGGTAGTTGCATTCCAAGCCCTCAAAAGAATGTTGAAAAAG 1615
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      ATTTCTTGAGGAAGTATTGGGCCAGGTGGAAAGCGGACCATGTGGGTCGTTGTCGTGCGA 1675
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      TGCCTCACATAAAAACTTTTACTCGATACAATGGTCAAGACATTGCATGGTTTCTACTAA 1735
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      CCTCGGCAAATTTAAGCAAAGCTGCTTGGGGTGCGTTGCAGAAGAATAATACACAACTGA 1795
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      TGATACGCTCATATGAGTTAGGTGTACTGTTCTTGCCCAAAACTCACCAATCTGTACCAC 1855
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AATTTTCATGTACGGGGAAGAACAATTCAAACCTGAATAACCTGGCCCCTGGGAAAGAGA 1915
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      TCAAAACCAAACTGGTCACACTCTGCTGGAAAAGCGACGAAGAAAAAGAACAATCCACGG 1975
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AAATTATCAGATTGCCAGTGCCATATCAACTTCCTCCAAAGCCTTACGGCACAGAAGATG 2035
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      TCCCATGGTCTTGGGACAAGAGGTACACAAAGAAGGACTTGTATGGTTCAGTCTGGCCGC 2095
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      GCCATGGTTAGCTAAGCGGTATGCGGACAATATATGATCAATGAAAGGCTAACCCTGCTC 2155
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      CGATGTCGACAACAAGAAGGCCGGTAGCTGATCGCCTGTCAGTGCCCACTACTCAACCAT 2215
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      TAGCAGGAAGTAGTACTATTTCCTGGGAGAGATTAGATATTTCTATTACTAATTTGTACG 2275
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      AGCACAGGATATTTTCTTTCTTGTTGGTACGAATCGTGTGCCTTGTCTGCTAAAAAAAGT 2335
consensus_9214#1      ------------------------------------------------------------
consensus_9214#2      ------------------------------------------------------------
                                                                                  

consensus_9214#0      GATGTTTATGCCTCCATCCTCTTTTA 2361
consensus_9214#1      --------------------------
consensus_9214#2      --------------------------
                                                




Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)