These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9217#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1266 fasta sequence [ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT-ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTCAAGCTG] [+] EMBL CB633836 [ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTCTGGGGTGAG ] [+] EMBL CB634685 [ CATAACTCCCACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGgtg ] [+] EMBL CB628209 [ AGCTCCCTGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGT ] [+] EMBL CB629057 [ GGAAGCAACATGGCTTTTCCACACTTCCAAAGACGAGGACCAATTCTTCATTCGCCTTGCTGAAGCAATAATCAAGCCTGACAGAATCGCTGTACTTGGGCGCGGAAGGTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGATCATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATGCTATGTCAAACCACCCTTGGATATGTGCAGCTGGATGCACTG ] [+] EMBL CB630393 [ GAAGCCCGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTCAAGCTG] [+] EMBL CB635077 [ GAAGCCCGTTAACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACA ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||