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Oryza sativa
cluster # 9217 cluster # 9217       Sequences # 6       consensus # 1


see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9217#0 length = 1266 sequences # 6  

consensusID : consensus_9217#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1266
fasta sequence
                              [ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT-ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTCAAGCTG]

[+] EMBL CB633836             [ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTCTGGGGTGAG                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[+] EMBL CB634685             [                              CATAACTCCCACCACTACGCGACGACGAACCAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCAGAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCGGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGgtg                                                                                                                                                                                                                                                                                                                                                                                           ]
[+] EMBL CB628209             [                                                                                                                                                                            AGCTCCCTGAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGCTTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTCATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTTTTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAGCCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGT                                                                                                                                                                                                                                                                                                                                                                         ]
[+] EMBL CB629057             [                                                                                                                                                                                                                                                                                                                                                        GGAAGCAACATGGCTTTTCCACACTTCCAAAGACGAGGACCAATTCTTCATTCGCCTTGCTGAAGCAATAATCAAGCCTGACAGAATCGCTGTACTTGGGCGCGGAAGGTGGCGGAGTTATAGAAGCGACGAAGAGAAGCCTGACGACAAACAAAAGATCATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATGCTATGTCAAACCACCCTTGGATATGTGCAGCTGGATGCACTG                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL CB630393             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGCCCGACGACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTCAAGCTG]
[+] EMBL CB635077             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                               GAAGCCCGTTAACAAACAAAAGAT ATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCACTCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATCGGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTATCAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCGCTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTGCGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATATGTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGATTTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGATTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAGATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGACATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCTGACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACAAACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACA                           ]


>consensus_9217#0 ACTCGCTCGATCGAGAGCAATACAATGTCGCATAACTCCAACCACTACGCGACGACGAAC CAGCATAGCCACGACGATGAACGCTGCCAGGGCAGCTTCGTCATGGCAGTGCCGCCGTCA GAGAATGATAGTGATGATGATAATAACCCGCCGGATCATGTAGTAGAAGACAAGCTGCCG GAAGAGAAGCTCAACACCATGGCTCTACGAATGTCGTTCTACTGCCGGGTGATGAACGGC TTTGGTGCTCTGGCTCTTGCATGGGCCACGGTGGTGCTGCTAGGTGGATACGCCACCCTC ATCAAACCGAAGGACTTCTGGTTGGTGACCATCCTCATCTTCTTGGAAGCAACATGGCTT TTCAACACTTCCAAAGCCGAGGACCAATTCTTCATTCGCCTTCCTGAAGCAATAATCAAG CCTGACAGAATTGCTGTACTTGGGCGCGGAAGTTGGCGGAGTTATAGAAGCGACGAAGAG AAGCCTGACGACAAACAAAAGATATTTTTTGAGTTGCTTCCGGCCTTCAAAAATGGTCAC TCCTGCTTGGTGATCCTATGTCAGACCACCCTTGGATATGTGCAGCTGGCTGCACTGATC GGTACCATGGTTGTCAGTTCGTTGCGCCTGAAAAGGCAAGATTATGTCTATCCAATCTAT CAACAAAGTGATGACCATAAGAACATCAGGTGGTCCCTGAACATCTTCTATGGATTGGCG CTCTCCCGGTGCATTGTCTATTTCCTGATTACGATCTTGGCAAACCCGTTGAAACGGGTG CGACGCGTTGGCTTCACGTATAACTTAGGATTTTGGGGTGAGCTATCTCTTACTCGATAT GTTGAGGAATGTTATCTGAAATGCGTCAGTGGTGATTTTCATGGTGCAATCAACATGGAT TTGGTTAGCTTTTCAAAAGATCTGCTAAGTTCCGACTCGATAGAGAACCACCTTATAGGA TTTCGTATTCTCGACCACCTTCTCAGAAGCAAAATGTACAAACAGAGAGTGCTGAAGAAG ATTCGAGTTTCCATTGGCACAATTCAGATGGCAGTCCACATGCTGAGCTTGAAGATTGAC ATGGACATGGACATAGACACAAGAGGGCATGCTGCACGTGTATTGCTTGAGCTCGCGCCT GACCTCCAGGTGGAGAGCTTTCCTGGTATCCTGCCTTCAATCTCCTCGCTGCTCAGCACA AACAAAGGGGTCACCAACAGTGAAAGCTCCAGCAACACAATCACTGTCATGAAAGAGTTC AAGCTG



clustalw multiple alignements is not computed in this case


Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner    (hubert.wassner@noos.fr)