These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9219#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1121 fasta sequence [TCCACGAGAAGCAGCAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGGGAAGCAATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGGGCTGATGGACCGGCGGGCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTCGGGCCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTGTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGATAGTAAAGTTTGGAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAGAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGAACAACGG-GCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT-GCTTTCATGTTT-GTACTTGT-GCA-GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAAAAACCACTCCTTGACTGAAAAAA] [+] EMBL AK072629 [TCCACGAGAAGCAGCAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGGGAAGCAATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGGGCTGATGGACCGGCGGGCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTCGGGCCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTGTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGATAGTAAAGTTTGGAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAGAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGAACAACGG GCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTC ] [+] EMBL OSS3916A [ GCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTC GGNCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTNTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTTCAGTTTTGGGATGA ] [-] EMBL CF335318 [ GAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAAAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGAACAACGGNGCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATTTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATCGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAGTAACCACTCCTTGACTGAAAAAA] [+] EMBL CF331468 [ TGGGATGCCATTTCCGAATCTTATGAACAACGG GCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTGGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAAAAA ] [-] EMBL CF331467 [ GGGATGCCATTTCCGAATCTTATGAACAACGGCGCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATTTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTGGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAAAAAa ] [+] EMBL AU108440 [ TGATTAACCTATGAAAGGATTAAATCGCTTTCATGTTTNGTACTTGTNGCANGACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAaaaa ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||