cluster # 9219

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Oryza sativa
cluster # 9219 cluster # 9219 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9219#0 length = 1121 sequences # 6
consensusID : consensus_9219#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1121
fasta sequence
                              [TCCACGAGAAGCAGCAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGGGAAGCAATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGGGCTGATGGACCGGCGGGCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTCGGGCCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTGTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGATAGTAAAGTTTGGAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAGAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGAACAACGG-GCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT-GCTTTCATGTTT-GTACTTGT-GCA-GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAAAAACCACTCCTTGACTGAAAAAA]

[+] EMBL AK072629             [TCCACGAGAAGCAGCAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGGGAGGGAGAGGGAAGCAATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGGGCTGATGGACCGGCGGGCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTCGGGCCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTGTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGATAGTAAAGTTTGGAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAGAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGAACAACGG GCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTC                                       ]
[+] EMBL OSS3916A             [                                                                                                                                 GCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCCGTC GGNCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATCGACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAGGATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTNTCAAGAAATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCTCAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAACTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTTCAGTTTTGGGATGA                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                    ]
[-] EMBL CF335318             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                GAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCCAATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACTGTTACACCAAGAAAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGAACAACGGNGCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATTTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATCGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAGTAACCACTCCTTGACTGAAAAAA]
[+] EMBL CF331468             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                      TGGGATGCCATTTCCGAATCTTATGAACAACGG GCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTGGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAAAAA                    ]
[-] EMBL CF331467             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                       GGGATGCCATTTCCGAATCTTATGAACAACGGCGCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCAGACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATTTAAGACAATCTGATTAACCTATGAAAGGATTAAAT GCTTTCATGTTT GTACTTGT GCA GACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTGGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAGTCTGTTGGCACTAACCAAAAAa                   ]
[+] EMBL AU108440             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                              TGATTAACCTATGAAAGGATTAAATCGCTTTCATGTTTNGTACTTGTNGCANGACAGCCCTTGCAGCACCGAGAGCAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATTGGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATATTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAaaaa                                                     ]




>consensus_9219#0
TCCACGAGAAGCAGCAGCAGCCGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGA
GGGAGGGAGAGGGAAGCAATGGTGGCGACGAACCTGAAGGCGGAGACGGTGGGGCTGATG
GACCGGCGGGCGGCGGTGGAGGCGGAGATGGACGCCATCATCGCCGCCCTCTCCGTGCCC
GTCGGGCCGGGGATCACCGGCGGCCTCGTGGACGCGGAGGGTTTCCCCAGGTCCGACATC
GACATCCCGGCCGTCCTCGCCCAGCGCCGCAAGCTCGCCGAATTGCGGAATGATCACAAG
GATATTACGAACAAAATTGAGAAGAATCTGGAAGTTTTGCACTCAACAAAATTGTCAAGA
AATGAAGCGTCAATCCCTGCAAGTTCTGGCACACCTGCTTCATTGCACAGTGGGTTATCT
CAAAATGATCCTATGGAAGAAGATGCTGTGACCAGACTTCCTTTTGCCATAATTGATGAA
CTGACAGATGGTTCTCCTGCTGCTGTGGATGGCTTGCAGCTTTGGGATGAGATAGTAAAG
TTTGGAAATGTGGAAGCAGGTGATAGATTGCAAGAAAGGCTTGTCTCTGAAGCTCTTTCC
AATGAGGATTGTCAAGTATCTCTAGTCATCATTCGTCAGGGATCATCAATGAACTTAACT
GTTACACCAAGAGAGTGGCACGGAAGAGGACTTTTGGGATGCCATTTCCGAATCTTATGA
ACAACGGGCCATGGTCCCACATCTATGAAAGAACGAGATGGTTTCGTTTTTGTGCTTGCA
GACAGAGCTCTTGCAGAATCAGCGATAACATTCAACATCTAAGACAATCTGATTAACCTA
TGAAAGGATTAAATGCTTTCATGTTTGTACTTGTGCAGACAGCCCTTGCAGCACCGAGAG
CAATCTGATTAACTGAATGCGTGTCCAAACCTTTTAGCATCCCCTTATTACATGTACATT
GGAAGCAAACCTGGCTGCCTTTGTTTGGAGTTTTTTTTAGGTGCATTGTTCTCATGCATA
TTGGTCCTATGAAATGATGTCTTATGCACAATCTTTTTGAAAAAGCGATGTAAATCTGAG
TCTGTTGGCACTAACCAAAAACCACTCCTTGACTGAAAAAA
clustalw multiple alignements is not computed in this case