cluster # 9233

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Oryza sativa
cluster # 9233 cluster # 9233 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9233#0 length = 743 sequences # 6
consensusID : consensus_9233#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 743
fasta sequence
                              [GAGTAGAAAAGCACATATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT-GGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGA-GGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCACTAGTCATTTTTTAAAAAAAAAA]

[+] EMBL CF335089             [GAGTAGAAAAGCACATATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGG CATGGTGGGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGAGGGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCG                                                                                                         ]
[+] EMBL AK062716             [                ATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT GGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGA GGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCACTAGTCAT               ]
[+] EMBL AU057722             [                                  AGCAGCAGCAGCCGATTATATATAGCTAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAGCAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGC                                                                                                                                                                                                                                                                                                                                                  ]
[+] EMBL AU162753             [                                                                                          ATGGGGAAGACGGAGCACAAGAAGAAGCAGCANCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGA GGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCG                                                                                                                                                                                                                                                                                                                                                                                                                                                                            ]
[-] EMBL CF335090             [                                                                                                                                                                                  AGGCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGGGACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTACCTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGACCTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT GGTGGTCTCGGCGTGCCAGTTCCAGACGACTCCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTACCGCCAATAATTAGATCTCGTTCAGTTTGGA GGGGGTTAAAAAGGATTAAGAGGGAATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCACTAGTCATTTTTTAAAAAAAAAA]
[+] EMBL AU057494             [                                                                                                                                                                                                                                                                                                                                                                                                                         cnGCACGGCCGACGGCGACCGGCGCCCCGCCGGCCATGGT GGTGGTCTCGGCGTGCCNGTTCCAGACGACTCCTCTCGTCTCTCGTNCCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGTNCCGCCNATAATTAGATCTCGTTCAGTTTGGN GGGGGTTAAAAAGGATTAAGAGGGNATAATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGATTGAAGAAaaa                                                                        ]




>consensus_9233#0
GAGTAGAAAAGCACATATATATGCAGTCGTAGAAAGCAGCAGCAGCCGATTATATATAGC
TAGCTACTAGCTCTAACTGATCGGCCGGCCATGGGGAAGACGGAGCACAAGAAGAAGCAG
CAGCAGCACGGCGGCGATGAGGCGGCGGCGGCGGCCAAGGAGAGGCTGGATCGCTTCAAG
GCGTGGCTGATGCATTTCGACGGCGACGGCGACGAGCATATCAGCCGGAGGGAGCTCCGG
GACGCCATCCGCTCCGGCGGCGCCCGGTTCGCCACCGTCCGGGCGTGGGTCAACCTCTAC
CTCGCCGACAAGAACCGGAACGGCGTCATCGACGACGGCGAGATCAAGCACCTCATGGAC
CTGACCGAGAAGGACCTCGACCTCAGCAAGCTGCAGCCCACGCCTGCGGCAGCACGGCCG
ACGGCGACCGGCGCCCCGCCGGCCATGGTGGTGGTCTCGGCGTGCCAGTTCCAGACGACT
CCTCTCGTCTCTCGTACCATTGACCTACGCAAATTAACTGCCAAACCAGTACTTTCTAGT
ACCGCCAATAATTAGATCTCGTTCAGTTTGGAGGGGGTTAAAAAGGATTAAGAGGGAATA
ATTCCTCACCGGGATAATAAACTCTATTCGATATTTCGATTAATGCCCAGGCGAGAAGGA
TTGAAGAAGATTCATTCCACACTAAATTATATGGTGTAGAATTATTCCCTCTATAATCCA
CTAGTCATTTTTTAAAAAAAAAA
clustalw multiple alignements is not computed in this case