These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9235#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1017 fasta sequence [TGGGCGGCCTCCAGTGGACGGCGGAGGAGGCGTCGACGATCGGGGGCATCGCGACGGTGTCGCTGCTGCACTCCTTCATCCCCACGCACTGGCTCCCCTTCTCCATCGTCGCCCGCGCCCAGCGGTGGCCGCTCTCCCGCACCCTCCTCGTCACTGCATTTGGAGGCGTCCTTCATGTTGTTTCCACTGCTCTTCTTGGGATAACTGCTGTTACTATGGCAAATACTATAGCAGGCGAGGAAACAGTGCATAAACTTGCATCACTGTTGCTGATTGTTCTTGGTGGAAGTTATATCCTGCTGTTTGCACTGGGAAAAGGTGGCCATGGCCATGCTCATAATCATCCAATGGAGAAGATGGCAGTTGCAGGTCTTGTACTTGTACCTGCATTATCACCCTGTGCAACAACTCTTCCAGTGTTTCTTGCTGTTGGCAATTCATCCTCCATGATGATCCTTGCGATCATTGTGCTCCTCTTTAGTACCATCACAGTGATGACATCCTTGGTGGCCCTCTCATTCTACGGTGCTAGCCAGATTAAGTTCCACTGGGTGGAACGTTACGACAAGATCCTTGTCGGCTCGGTCCTGTGCCTCGTTGGGGTTTTGACATACGTATTCCATCACCATGACGGCGACGAACACTCTCTCCATGAACACGTGCACCGGAAACTCGTGGGTCTTTAGAGTATAGTATAAGATTGCGGATGAAACTTTCCTACACTTGCGAGAGAAAATTGTGTTGTTCCCTAACCACTGTAACGGGTTTGCTGTATACAGATCTGATTATTAATCCATCTGAAGTCAGCTAGCCGGTTTTCTGGCAATGCAAAGGTTGTGCTGACTTGTGTTGTAGTTGCCTGTACATAGAGGTATTCTATCGTTT---GCTTATGCTGTTATGCACCCCCAAAATCAGAATACTACTTGCAAATGGGAAACATACTTGAACTGCATCCGTTGAATTTGGAGT-A--TTTGGTGGTAAT-GCAGAACTGGAAATCAGATTTGATTATTGCGAGTA] [+] EMBL AK061133 [TGGGCGGCCTCCAGTGGACGGCGGAGGAGGCGTCGACGATCGGGGGCATCGCGACGGTGTCGCTGCTGCACTCCTTCATCCCCACGCACTGGCTCCCCTTCTCCATCGTCGCCCGCGCCCAGCGGTGGCCGCTCTCCCGCACCCTCCTCGTCACTGCATTTGGAGGCGTCCTTCATGTTGTTTCCACTGCTCTTCTTGGGATAACTGCTGTTACTATGGCAAATACTATAGCAGGCGAGGAAACAGTGCATAAACTTGCATCACTGTTGCTGATTGTTCTTGGTGGAAGTTATATCCTGCTGTTTGCACTGGGAAAAGGTGGCCATGGCCATGCTCATAATCATCCAATGGAGAAGATGGCAGTTGCAGGTCTTGTACTTGTACCTGCATTATCACCCTGTGCAACAACTCTTCCAGTGTTTCTTGCTGTTGGCAATTCATCCTCCATGATGATCCTTGCGATCATTGTGCTCCTCTTTAGTACCATCACAGTGATGACATCCTTGGTGGCCCTCTCATTCTACGGTGCTAGCCAGATTAAGTTCCACTGGGTGGAACGTTACGACAAGATCCTTGTCGGCTCGGTCCTGTGCCTCGTTGGGGTTTTGACATACGTATTCCATCACCATGACGGCGACGAACACTCTCTCCATGAACACGTGCACCGGAAACTCGTGGGTCTTTAGAGTATAGTATAAGATTGCGGATGAAACTTTCCTACACTTGCGAGAGAAAATTGTGTTGTTCCCTAACCACTGTAACGGGTTTGCTGTATACAGATCTGATTATTAATCCATCTGAAGTCAGCTAGCCGGTTTTCTGGCAATGCAAAGGTTGTGCTGACTTGTGTTGTAGTTGCCTGTACATAGAGGTATTCTATCGTTT GCTTATGCTGTTATGCACCCCCAAAATCAGAATACTACTTGCAAATGGGAAACATACTTGAACTGCATCCGTTGAATTTGGAGT A TTTGGTGGTAAT GCAGAACTGGAAATCAGATTTGATTATTGCGAGT ] [+] EMBL AK099198 [TGGGCGGCCTCCAGTGGACGGCGGAGGAGGCGTCGACGATCGGGGGCATCGCGACGGTGTCGCTGCTGCACTCCTTCATCCCCACGCACTGGCTCCCCTTCTCCATCGTCGCCCGCGCCCAGCGGTGGCCGCTCTCCCGCACCCTCCTCGTCACTGCATTTGGAGGCGTCCTTCATGTTGTTTCCACTGCTCTTCTTGGGATAACTGCTGTTACTATGGCAAATACTATAGCAGGCGAGGAAACAGTGCATAAACTTGCATCACTGTTGCTGATTGTTCTTGGTGGAAGTTATATCCTGCTGTTTGCACTGGGAAAAGGTGGCCATGGCCATGCTCATAATCATCCAATGGAGAAGATGGCAGTTGCAGGTCTTGTACTTGTACCTGCATTATCACCCTGTGCAACAACTCTTCCAGTGTTTCTTGCTGTTGGCAATTCATCCTCCATGATGATCCTTGCGATCATTGTGCTCCTCTTTAGTACCATCACAGTGATGACATCCTTGGTGGCCCTCTCATTCTACGGTGCTAGCCAGATTAAGTTCCACTGGGTGGAACGTTACGACAAGATCCTTGTCGGCTCGGTCCTGTGCCTCGTTGGGGTTTTGACATACGTATTCCATCACCATGACGGCGACGAACACTCTCTCCATGAACACGTGCACCGGAAACTCGTGGGTCTTTAGAGTATAGTATAAGATTGCGGATGAAACTTTCCTACACTTGCGAGAGAAAATTGTGTTGTTCCCTAACCACTGTAACGGGTTTGCTGTATACAGATCTGATTATTAATCCATCTGAAGTCAGCTAGCCGGTTTTCTGGCAATGCAAAGGTTGTGCTGACTTGTGTTGTAGTTGCCTGTACATAGAGGTATTCTATCGTTT GCTTATGCTGTTATGCACCCCCAAAATCAGAATACTACTTGCAAATGGGAAACATA ] [+] EMBL CF335746 [TGGGCGGCCTCCAGTGGACGGCGGAGGAGGCGTCGACGATCGGGGGCATCGCGACGGTGTCGCTGCTGCACTCCTTCATCCCCACGCACTGGCTCCCCTTCTCCATCGTCGCCCGCGCCCAGCGGTGGCCGCTCTCCCGCACCCTCCTCGTCACTGCATTTGGAGGCGTCCTTCATGTTGTTTCCACTGCTTTTCTTGGGATAACTGCTGTTACTATGGCAAATACTATAGCAGGCGAGGAAACAGTGCATAAACTTGCATCACTGTTGCTGATTGTTCTTGGTGGAAGTTATATCCTGCTGTTTGCACTGGGAAAAGGTGGCCATGGCCATGCTCATAATCATCCAATGGAGAAGATGGCAGTTGCAGGTCTTGTACTTGTACCTGCATTATCACCCTGTGCAACAACTCTTCCAGTGTTTCTTGCTGTTGGCAATTCATCCTCCATGATGATC ] [-] EMBL CF335747 [ CTTGCTGTTGGCAATTCATCCTCCATGATGATCCTTGCGATCATTGTGCTCCTCTTTAGTACCATCACAGTGATGACATCCTTGGTGGCCCTCTCATTCTACGGTGCTAGCCAGATTAAGTTCCACTGGGTGGAACGTTACGACAAGATCCTTGTCGGCTCGGTCCTGTGCCTCGTTGGGGTTTTGACATACGTATTCCATCACCATGACGGCGACGAACACTCTCTCCATGAACACGTGCACCGGAAACTCGTGGGTCTTTAGAGTATAGTATAAGATTGCGGATGAAACTTTCCTACACTTGCGAGAGAAAATTGTGTTGTTCCCTAACCACTGTAACGGGTTTGCTGTATACAGATCTGATTATTAATCCATCTGAAGTCAGCTAGCCGGTTTTCTGGCAATGCAAAGGTTGTGCTGACTTGTGTTGTAGTTGCCTGTACATAGAGGTATTCTATCGTTT GCTTATGCTGTTATGCACCCCCAAAATCAGAATACTACTTGCAAATGGGAAACATACTTGAACTGCAaaaa ] [+] EMBL BI806962 [ tGCCCTCTCATT TACGGT CNA CCAGATTAAGTTCCACT GGTGGAACGTTACGACAAGATCCTTGTCGGCTCGGTCCTGTGCCTC TTGGGGTTTTGACATACGTATTCCATCACCATGAC GCGACGAACACTCTCTCCATGAACACGTGCACCGGAAACTCGTGGTTCTTTAGAGTATAGTATAAGATT CGGATGAAACTTTCCTACACTTGCGAGAGAAAATTGTGTTGTTCCCTAACCACTGTAACGGGTTTGCTGTATACAGATCTGATTATTAATCCATCTGAAGTCAGCTAGCCGGTTTTCTGGCAATGCAAAGCNTGTGCTGACTTGTGTTGTAGTTGCCTGTACATAGAGGTATTCTATCGTTTTTGGCTTATGCTG TA GCACC AATCAGAATACTACTTGCAAATGGGAAACATACTTGAACTGCATCCGTTGAATTTGGAGT ATTTTTGGTGGTAAT CCCCCCTGGAAATCcaaaaaaa ] [+] EMBL BI804358 [ TGCTGACTTGTGTTGTAGTTGCCTGTACATAGAGGTATTCTATCGTTT GCTTATGCTGTTATGCACCCCC AAATCAGAATACTACTTGC AATGGGAAACATACTTGAACTGCATCCGTTGAATTTGGAGTCA TTTGGTGGTAATCGCAGAACTGGAAATCAGATTTGATTAaaaaaaaaa] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||