These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9243#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1170 fasta sequence [AAGTCCAGAGGAAGCCAAGAGATGGGCTCCGCTTCGCTGGCGACGCAGCCTTCGCCGGCGGCGTGCCTCCCGTCCCTGCCCGCCGGCGGCCGTCTCCGCCTCCGCCTGGCTCCACCACCCCGCGCTCCGCCGCGCCTCTGCAAGCGCGCCGGCAAACTCCGGGTTGTTACCATCAGATCAGCTCATAGTGGTGTGAGCAATGTATCTGTAGAAACCCCTCCTGACAATGAGGCATCCGTGACCGGTGCTGCTTACGGCTTCAGAGGAGCAACAACATCGCTTACGAATGAGATGTTAACTTTGTCGAAGAAGATTACTCTTGTCAGGCATGGTTTGAGCACTTGGAATGCGGAAAGCCGCGTACAGGGAAGCTCAAATCTGTCCGTGTTAACAGAAACTGGTGCCAAGCAGGCAGAGAAATGTCGCGATGCCCTTGCGAACATGAAATTCGACGTTTGTTTCTCTAGTCCTATCTCACGGGCAAAGTCAACTGCCGAAATTATATGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACACCAGATGGCGGGAGGATCCTTCAAATTTCAAGGTCAATGGCATATACCCAGTTCGGAAGTTATGGGGAACAGCAAGAGAAGCTTGGAAGGAAATCTTGCTTACTCCAGGAGAAAATATGTTGGTCGTTACTCACAAATCTATTTTGCGCGCACTCATCTGCACCGCGCTAGGTCTTCCTCCTGAGAGGTTTCGTTCCATTGATGTGAACAATGGTGGCATGTGCGTCTTCACTGTAAACAAGCGAGGAGAGGCTATGCTTCAAGCCCTTAACATGACAGCACACATGTATAGTGACCATACATACCAGTATTAGTTATCTGTTCTTCTCTTTTTTGGGGGGGTGTCTGCATTTCTGTCAAGTATATTAGCAGTTTAGCACACCCTGATTAGACAAACTTCATTCTCGATGAAATAGCATGGATAGGTCACACAAATCGACCCTCTCTGATATAGTTGTTGATGTGAATATAAACTGTTTACAAGGATCAACTACTCAACTAGTGATGCGCTGAAAAGTGAAAACTGAACATTTTTAGGCCAGTCTAAGCAA] [+] EMBL AK068739 [AAGTCCAGAGGAAGCCAAGAGATGGGCTCCGCTTCGCTGGCGACGCAGCCTTCGCCGGCGGCGTGCCTCCCGTCCCTGCCCGCCGGCGGCCGTCTCCGCCTCCGCCTGGCTCCACCACCCCGCGCTCCGCCGCGCCTCTGCAAGCGCGCCGGCAAACTCCGGGTTGTTACCATCAGATCAGCTCATAGTGGTGTGAGCAATGTATCTGTAGAAACCCCTCCTGACAATGAGGCATCCGTGACCGGTGCTGCTTACGGCTTCAGAGGAGCAACAACATCGCTTACGAATGAGATGTTAACTTTGTCGAAGAAGATTACTCTTGTCAGGCATGGTTTGAGCACTTGGAATGCGGAAAGCCGCGTACAGGGAAGCTCAAATCTGTCCGTGTTAACAGAAACTGGTGCCAAGCAGGCAGAGAAATGTCGCGATGCCCTTGCGAACATGAAATTCGACGTTTGTTTCTCTAGTCCTATCTCACGGGCAAAGTCAACTGCCGAAATTATATGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACACCAGATGGCGGGAGGATCCTTCAAATTTCAAGGTCAATGGCATATACCCAGTTCGGAAGTTATGGGGAACAGCAAGAGAAGCTTGGAAGGAAATCTTGCTTACTCCAGGAGAAAATATGTTGGTCGTTACTCACAAATCTATTTTGCGCGCACTCATCTGCACCGCGCTAGGTCTTCCTCCTGAGAGGTTTCGTTCCATTGATGTGAACAATGGTGGCATGTGCGTCTTCACTGTAAACAAGCGAGGAGAGGCTATGCTTCAAGCCCTTAACATGACAGCACACATGTATAGTGACCATACATACCAGTATTAGTTATCTGTTCTTCTCTTTTTTGGGGGGGTGTCTGCATTTCTGTCAAGTATATTAGCAGTTTAGCACACCCTGATTAGACAAACTTCATTCTCGATGAAATAGCATGGATAGGTCACACAAATCGACCCTCTCTGATATAGTTGTTGATGTGAATATAAACTGTTTACAAGGATCAACTACTCAACTAGTGATGCGCTGAAAAGTGAAAACTGAACA ] [+] EMBL AK060943 [ TCCAGAGGAAGCCAAGAGATGGGCTCCGCTTCGCTGGCGACGCAGCCTTCGCCGGCGGCGTGCCTCCCGTCCCTGCCCGCCGGCGGCCGTCTCCGCCTCCGCCTGGCTCCACCACCCCGCGCTCCGCCGCGCCTCTGCAAGCGCGCCGGCAAACTCCGGGTTGTTACCATCAGATCAGCTCATAGTGGTGTGAGCAATGTATCTGTAGAAACCCCTCCTGACAATGAGGCATCCGTGACCGGTGCTGCTTACGGCTTCAGAGGAGCAACAACATCGCTTACGAATGAGATGTTAACTTTGTCGAAGAAGATTACTCTTGTCAGGCATGGTTTGAGCACTTGGAATGCGGAAAGCCGCGTACAGGGAAGCTCAAATCTGTCCGTGTTAACAGAAACTGGTGCCAAGCAGGCAGAGAAATGTCGCGATGCCCTTGCGAACATGAAATTCGACGTTTGTTTCTCTAGTCCTATCTCACGGGCAAAGTCAACTGCCGAAATTATATGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACACCAGATGGCGGGAGGATCCTTCAAATTTCAAGGTCAATGGCATATACCCAGTTCGGAAGTTATGGGGAACAGCAAGAGAAGCTTGGAAGGAAATCTTGCTTACTCCAGGAGAAAATATGTTGGTCGTTACTCACAAATCTATTTTGCGCGCACTCATCTGCACCGCGCTAGGTCTTCCTCCTGAGAGGTTTCGTTCCATTGATGTGAACAATGGTGGCATGTGCGTCTTCACTGTAAACAAGCGAGGAGAGGCTATGCTTCAAGCCCTTAACATGACAGCACACATGTATAGTGACCATACATACCAGTATTAGTTATCTGTTCTTCTCTTTTTTGGGGGGGTGTCTGCATTTCTGTCAAGTATATTAGCAGTTTAGCACACCCTGATTAGACAAACTTCATTCTCGATGAAATAGCATGGATAGGTCACACAAATCGACCCTCTCTGATATAGTTGTTGATGTGAATATAAACTGTTTACAAGGATCAACTACTCAACTAGTGATGCGCTGAAAAGTGAAAACTGAACATTTTT ] [+] EMBL CB659562 [ GGCTCCGCTTCGCTGGCGACGCAGCCTTCGCCGGCGGCGTGCCTCCCGTCCCTGCCCGCCGGCGGCCGTCTCCGCCTCCGCCTGGCTCCACCACCCCGCGCTCCGCCGCGCCTCTGCAAGCGCGCCGGCAAACTCCGGGTTGTTACCATCAGATCAGCTCATAGTGGTGTGAGCAATGTATCTGTAGAAACCCCTCCTGACAATGAGGCATCCGTGACCGGTGCTGCTTACGGCTTCAGAGGAGCAACAACATCGCTTACGAATGAGATGTTAACTTTGTCGAAGAAGATTACTCTTGTCAGGCATGGTTTGAGCACTTGGAATGCGGAAAGCCGCGTACAGGGAAGCTCAAATCTGTCCGTGTTAACAGAAACTGGTGCCAAGCAGGCAGAGAAATGTCGCGATGCCCTTGCGAACATGAAATTCGACGTTTGTTTCTCTAGTCCTATCTCACGGGCAAAGTCAACTGCCGAAATTATATGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACACCAGATGGCGGGAGGATCCTTCAAATTTCAAGGTCAATGGCATATACCCAGTTCGGAAGTTATGGGGAACAGCAAGAGAAGCTTGGAAGGAAATCTTGCTTACTCCAGGAGAAAATATGTTGGTCGTTACTCACAAATCTATTTTGCGCGCACTCATCTGCACCGCGCTAGGTCTTCCTCCTGAGAGGTTTCGTTCCATTGATGTGAACAATGGTGGCATGTG ] [+] EMBL CB684990 [ gctcccttACGCAGCCTTCGCCGGCGGCGTGCCTCCCGTCCCTGCCCGCCGGCGGCCGTCTCCGCCTCCGCCTGGCTCCACCACCCCGCGCTCCGCCGCGCCTCTGCAAGCGCGCCGGCAAACTCCGGGTTGTTACCATCAGATCAGCTCATAGTGGTGTGAGCAATGTATCTGTAGAAACCCCTCCTGACAATGAGGCATCCGTGACCGGTGCTGCTTACGGCTTCAGAGGAGCAACAACATCGCTTACGAATGAGATGTTAACTTTGTCGAAGAAGATTACTCTTGTCAGGCATGGTTTGAGCACTTGGAATGCGGAAAGCCGCGTACAGGGAAGCTCAAATCTGTCCGTGTTAACAGAAACTGGTGCCAAGCAGGCAGAGAAATGTCGCGATGCCCTTGCGAACATGAAATTCGACGTTTGTTTCTCTAGTCCTATCTCACGGGCAAAGTCAACTGCCGAAATTATATGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACCCCAGATGGCGGGAGGATCCTTCCAATTTCAAGGCCAATG ] [-] EMBL CB659563 [ GCTTACGAATGAGATGTT ACTTTGTCGAAGAAGATTACTCTTGTCAGGCATGGTTTGAGCACTTGGAATGCGGAAAGCCGCGTACAGGGAAGCTCAAATCTGTCCGTGTTAACAGAAACTGGTGCCAAGCAGGCAGAGAAATGTCGCGATGCCCTTGCGAACATGAAATTCGACGTTTGTTTCTCTAGTCCTATCTCACGGGCAAAGTCAACTGCCGAAATTATATGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACACCAGATGGCGGGAGGATCCTTCAAATTTCAAGGTCAATGGCATATACCCAGTTCGGAAGTTATGGGGAACAGCAAGAGAAGCTTGGAAGGAAATCTTGCTTACTCCAGGAGAAAATATGTTGGTCGTTACTCACAAATCTATTTTGCGCGCACTCATCTGCACCGCGCTAGGTCTTCCTCCTGAGAGGTTTCGTTCCATTGATGTGAACAATGGTGGCATGTGCGTCTTCACTGTAAACAAGCGAGGAGAGGCTATGCTTCAAGCCCTTAACATGACAGCACACATGTATAGTGACCATACATACCAGTATTAGTTATCTGTTCTTCTCTTTTTTGGGGGGGTGTCTGCATTTCTGTCAAGTATATTAGCAGTTTAGCACACCCTGATTAGACAAACTTCATTCTCGATGAAATAGCATGGATAGGTCACACAAATCGACCCTCTCTGATATAGTTGTTGATGTGAATATAAACTGTTT ] [-] EMBL CB684991 [ TGGAAGGGAAAGGAGGAGCCTCTTATATTTCTTGATTCTTTAAAAGAGGCTCATCTATTCTTCTTAGAGGGCATGACCAATGCGGATGCTAAGAAGGAATATCCAGAGTTGTACACCAGATGGCGGGAGGATCCTTCAAATTTCAAGGTCAATGGCATATACCCAGTTCGGAAGTTATGGGGAACAGCAAGAGAAGCTTGGAAGGAAATCTTGCTTACTCCAGGAGAAAATATGTTGGTCGTTACTCACAAATCTATTTTGCGCGCACTCATCTGCACCGCGCTAGGTCTTCCTCCTGAGAGGTTTCGTTCCATTGATGTGAACAATGGTGGCATGTGCGTCTTCACTGTAAACAAGCGAGGAGAGGCTATGCTTCAAGCCCTTAACATGACAGCACACATGTATAGTGACCATACATACCAGTATTAGTTATCTGTTCTTCTCTTTTTTGGGGGGGTGTCTGCATTTCTGTCAAGTATATTAGCAGTTTAGCACACCCTGATTAGACAAACTTCATTCTCGATGAAATAGCATGGATAGGTCACACAAATCGACCCTCTCTGATATAGTTGTTGATGTGAATATAAACTGTTTACAAGGATCAACTACTCAACTAGTGATGCGCTGAAAAGTGAAAACTGAACATTTTAAGGCCAGTCTAAGCAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||