These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9284#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1671 fasta sequence [AAAGTTGTATTCGAATGGANGACCAATGATGCATATGCAGGAGTTAATGCATAAATGATGGAAATGGTAATGATTCTGAAACTAAAGTTATTATGGATGAGGCACNGATTTTAACACGAAGATGAGCACATGCTCAAAAGAACTGAGTGCTTCATTTTTAGAGTCATCTGCTAGCATGCAGCACTTGTCTCAGATTGACAAGTCTATTGCTGCTCAGACATCTGATAAGAGCACCCCTCTTGAAAACCTTGGAGAGGATTGCAGAGAAAGAGAATTTCCAGAAGAAAATAGTACAGCACTGGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAAATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTACCAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGAGAATTGAAGGGAGGGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGCATAGACTAGATGAAGAC-AAGAAATATACAAAATGGAAAGAGAAAAGGAACAAGCTAAAGAGAGGTCAAGAAGAGAATTAGAAGAAGAGAAGGAACGGGAGAGAGAGCGAGCAAAAGATAGACTTGCTGTTCAGAGAGCTACGAAAGAAGCACATGAGAGAGCATTTGCTGAGGCCCGTGCAAAGGCTGAAAGAATAGCATTGGAAAGGATTACCTTAGCACGTCAACGAGCATCTGCAGAAGCTCGAGAGAAAGAGGAGAAGGCAACTGCGGAAGCAGCTACTGAGAAGGCTTCTAGAGAAGCTAGACTAAAGGCAGAACGTGCAGCAGTTGAGAGAGCAACTGCTGAAGCTCGGGAGAGAGCAATTGAAAAGGCAAAAGCTGCTGCAGATGCAAAGGAGCGAATGGAAAGATTTAGATCCTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCAGAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGT--AGTTTGAGTCAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAACCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATATTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTAAAATTATATTTTNTNAAACAAATTTCAAAGGCCTAATGATAAAAANGCTCGATAACAAAACTGTCGAATAGCGTTGTGGAGAGCGGTTTTGATATGTGATCTGANCAAAATNACA] [+] EMBL BI806830 [AAAGTTGTATTCGAATGGANGACCAATGATGCATATGCAGGAGTTAATGCATAAATGATGGAAATGGTAATGATTCTGAAACTAAAGTTATTATGGATGAGGCACNGATTTTAACACGAAGATGAGCACATGCTCAAAAGAACTGAGTGCTTCATTTTTAGAGTCATCTGCTAGCATGCAGCACTTGTCTCAGATTGACAAGTCTATTGCTGCTCAGACATCTGATAAGAGCACCCCTCTTGAAAACCTTGGAGAGGATTGCAGAGAAAGAGAATTTCCAGAAGAAAATAGTACAGCACTGGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAAATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTACCAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGAGAATTGAAGGGAGGGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGCATAGACTAGATGAAGAC AAGAAATATACAAAA ] [+] EMBL CB626434 [ AGAAGACCTTA AACAGCACTGGAACAAGGGCAAGCTATTGGAAGTAAAATGGAAGGAGATGACAAAGATAAACAGTCAAAATTAAATGTAAAGGATCAGAAATATTTTCATTTGGACAGCTACATTGTACCTAAATTTA CAGAGAACACTACATTGAATTTTGTCCAGAAATTGATAGATGAGACCCCTGATGGTCAGAGAATTGAAGGGAGAGAAAATGTGAAAAAGACACTGAGAGAAACTGAGAAGGAGGTCTTGCATAGACTAGATGAAGACAAAGAAATATACAAAATGGAAAGAGAAAAGGAACAAGCTAAAGAGAGGTCAAGAAGAGAATTAGAAGAAGAGAAGGAACGGGAGAGAGAGCGAGCAAAAGATAGACTTGCTGTTCAGAGAGCTACGAAAGAAGCACATGAGAGAGCATTTGCTGAGGCCCGTGCAAAGGCTGAAAGAATAGCATTGGAAAGGATTACCTTAGCACGTCAACGAGCATCTGCAGAAGCTCGAGAGAAAGAGGAGAAGGCAACTGCGGAAGCAGCTACTGAGAAGGCTTCTAGAGAAGCTAGACTAAAGGCAGAACGTGCAGCAGTTGAGAGAGCAACTGCTGAAGCTCGGGAGAGAGCAATTGAAAAGGCAAAAGCTGCTGCAGATGCAAAGGAGCGAATGGAAAGATTTAGATCCTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCAGAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGT AGTTg ] [+] EMBL CF276428 [ TAGATCCTCCTTCAAGGACAGTTTCAAGTCTACTAATCAGGATAATCAACTGGACAAACAGTTTCAGAAGACAGCTTCTAATAACTATGAAAGAAGCACGGATTCTAGTAATCAAGTTGAGTTTGAGTCAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAATGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAG ] [-] EMBL CB622083 [ gttg AGTTTGAGTCAGCTCTGAGACATAAAGCAAGATCTGAGAGGGAACATCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAACCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATATTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTA ] [-] EMBL CB626435 [ TCGCACAGCTGAGCGAGCGGCCAAAGCTCTAGCTGAAAAGAATATGCGGGACATGCTGGCTCAGAGAGAGCAAGCAGAGAGACATAGATTAGCTGAATACCTTGACCCCGAAGTCAAGAGATGGTCAAATGGAAAGGAAGGAAATCTGCGAGCATTGCTATCTACATTGCAATATATCCTTGGTTCAGATAGTGGTTGGCAATCGGTTCCCCTCACAGATCTCATTACAGCAACTGCTGTCAAGAAAGCATATAGAAGGGCAACCCTTTGTGTCCATCCCGATAAACTACAACAAAGGGGTGCTACAATCAGACAGAAATATATTTGTGAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATAGCTCGGGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTA ] [+] EMBL AA750887 [ GAGAAGGTGTTTGATCTTCTTAAGGAGGCATGGAACAAATTCAATTCCGAAGAGCGATACGT GGATGTAGGGGACAATAAATTGGATTTTTGATTTTCTAGTTTTACTAAAATTATATTTTNTNAAACAAATTTCAAAGGCCTAATGATAAAAANGCTCGATAACAAAACTGTCGAATAGCGTTGTGGAGAGCGGTTTTGATATGTGATCTGANCAAAATNACA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||