These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9289#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1290 fasta sequence [TCTCAATCGACTTTTCAACACATTAAGTTGGACTATGACCGAGTCCTCTATGTCCATCCGTGAGATGCAAGAGAAGCGCCAGGTTGCAGATTTGCAGCAAAGAAAGTGCAGTGTTATTTTTGACATATCATGTAGTCTTGCAAGGATTTTGGAATTCTTCACCAGAGAGATTCCTCATGCATTCCTGATGGGGCCAGATATGAATCTGCGGAGGTTGGCTGAATTAGTTGTCTTTATTCTGAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTGACATGACTCTAAGACGGCCAGGGCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCTCAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGTGTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTACAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGAATTCTCCCATTACTTTATGCACATCACTATGTCAGC-GGATGGCAATGAAGAGCAAGGTTTCAGCACTGCCAGTAATGAAGAGAACAACTGCTGCATATGCTACAATTCCGATTCGGATACCACATTCGAGCCATGCCATCACAGGTCCTGCTACGGCTGCATAACCAGGCACCTCCTCAACAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTCGCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG-TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATAT-GTTGAATAAGAGCCTCACTATTTTTCTTAAAAAAAAAAA] [+] EMBL AK063254 [TCTCAATCGACTTTTCAACACATTAAGTTGGACTATGACCGAGTCCTCTATGTCCATCCGTGAGATGCAAGAGAAGCGCCAGGTTGCAGATTTGCAGCAAAGAAAGTGCAGTGTTATTTTTGACATATCATGTAGTCTTGCAAGGATTTTGGAATTCTTCACCAGAGAGATTCCTCATGCATTCCTGATGGGGCCAGATATGAATCTGCGGAGGTTGGCTGAATTAGTTGTCTTTATTCTGAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTGACATGACTCTAAGACGGCCAGGGCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCTCAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGTGTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTACAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGAATTCTCCCATTACTTTATGCACATCACTATGTCAGC GGATGGCAATGAAGAGCAAGGTTTCAGCACTGCCAGTAATGAAGAGAACAACTGCTGCATATGCTACAATTCCGATTCGGATACCACATTCGAGCCATGCCATCACAGGTCCTGCTACGGCTGCATAACCAGGCACCTCCTCAACAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTCGCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTA ] [+] EMBL C72082 [ TGGAATTCTTCACCAGAGAGATTCCTCATGCATTCCTGATGGGGCCAGATATGAATCTNCGGAGGTTGGCTGAATTAGTTGTCTTTATTCTGAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTNACATGACTCTAAGACGGCCAGGGCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCTCAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGTGTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTACAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGAATTCTCCCATTACTTTATGCACATCACTATGTCAACGGGATGGCAATGAAGn ] [+] EMBL AU091866 [ CTGNTACGGCTGCATAACCAGGCACCTCCTCAACAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTCGCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATAT GTTGAATAAGAGCCTCACTATTTTTCTTAAAAAAAAAAA] [+] EMBL AA751125 [ TTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGTGTGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAG TCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTG AGTCAGAAAGGTTAATCTTTT NCTTGTGTAAAGATCA GTAATAGT AAACAAAAAg ] [+] EMBL BQ906553 [ CCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACNAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGGCTTGTAGGGAAAAATTCCATTGTAAATACGAGATATAAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATATNCTTGCATAAGAGCCTCACTATTTTTCTTAAAAAA ] [+] EMBL AU183079 [ AGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATAT GTTGAATAAGAGCCTCACTATTTTTCTTAAAAAAAAAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||