cluster # 9289

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Oryza sativa
cluster # 9289 cluster # 9289 Sequences # 6 consensus # 1
see consensus multiple alignment with clustalw

Direct access to contigs :
consensus_9289#0 length = 1290 sequences # 6
consensusID : consensus_9289#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 6
consensus length = 1290
fasta sequence
                              [TCTCAATCGACTTTTCAACACATTAAGTTGGACTATGACCGAGTCCTCTATGTCCATCCGTGAGATGCAAGAGAAGCGCCAGGTTGCAGATTTGCAGCAAAGAAAGTGCAGTGTTATTTTTGACATATCATGTAGTCTTGCAAGGATTTTGGAATTCTTCACCAGAGAGATTCCTCATGCATTCCTGATGGGGCCAGATATGAATCTGCGGAGGTTGGCTGAATTAGTTGTCTTTATTCTGAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTGACATGACTCTAAGACGGCCAGGGCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCTCAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGTGTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTACAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGAATTCTCCCATTACTTTATGCACATCACTATGTCAGC-GGATGGCAATGAAGAGCAAGGTTTCAGCACTGCCAGTAATGAAGAGAACAACTGCTGCATATGCTACAATTCCGATTCGGATACCACATTCGAGCCATGCCATCACAGGTCCTGCTACGGCTGCATAACCAGGCACCTCCTCAACAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTCGCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG-TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATAT-GTTGAATAAGAGCCTCACTATTTTTCTTAAAAAAAAAAA]

[+] EMBL AK063254             [TCTCAATCGACTTTTCAACACATTAAGTTGGACTATGACCGAGTCCTCTATGTCCATCCGTGAGATGCAAGAGAAGCGCCAGGTTGCAGATTTGCAGCAAAGAAAGTGCAGTGTTATTTTTGACATATCATGTAGTCTTGCAAGGATTTTGGAATTCTTCACCAGAGAGATTCCTCATGCATTCCTGATGGGGCCAGATATGAATCTGCGGAGGTTGGCTGAATTAGTTGTCTTTATTCTGAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTGACATGACTCTAAGACGGCCAGGGCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCTCAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGTGTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTACAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGAATTCTCCCATTACTTTATGCACATCACTATGTCAGC GGATGGCAATGAAGAGCAAGGTTTCAGCACTGCCAGTAATGAAGAGAACAACTGCTGCATATGCTACAATTCCGATTCGGATACCACATTCGAGCCATGCCATCACAGGTCCTGCTACGGCTGCATAACCAGGCACCTCCTCAACAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTCGCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTA                                                                            ]
[+] EMBL C72082               [                                                                                                                                                     TGGAATTCTTCACCAGAGAGATTCCTCATGCATTCCTGATGGGGCCAGATATGAATCTNCGGAGGTTGGCTGAATTAGTTGTCTTTATTCTGAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTNACATGACTCTAAGACGGCCAGGGCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCTCAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGTGTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTACAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGAATTCTCCCATTACTTTATGCACATCACTATGTCAACGGGATGGCAATGAAGn                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                             ]
[+] EMBL AU091866             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                CTGNTACGGCTGCATAACCAGGCACCTCCTCAACAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTCGCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATAT GTTGAATAAGAGCCTCACTATTTTTCTTAAAAAAAAAAA]
[+] EMBL AA751125             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                  TTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCATGCCGTGTGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAG TCGGAGCCTCGGAGTTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTG AGTCAGAAAGGTTAATCTTTT NCTTGTGTAAAGATCA GTAATAGT  AAACAAAAAg                                                                                                                                                                                                                                                                                               ]
[+] EMBL BQ906553             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                          CCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTAATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACNAAAAAAGATTCAATAACAGGATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGGCTTGTAGGGAAAAATTCCATTGTAAATACGAGATATAAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATATNCTTGCATAAGAGCCTCACTATTTTTCTTAAAAAA     ]
[+] EMBL AU183079             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                     AGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCACAGAATCGTGAAATTTTTGTAGG TTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAAACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAAATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATAT GTTGAATAAGAGCCTCACTATTTTTCTTAAAAAAAAAAA]




>consensus_9289#0
TCTCAATCGACTTTTCAACACATTAAGTTGGACTATGACCGAGTCCTCTATGTCCATCCG
TGAGATGCAAGAGAAGCGCCAGGTTGCAGATTTGCAGCAAAGAAAGTGCAGTGTTATTTT
TGACATATCATGTAGTCTTGCAAGGATTTTGGAATTCTTCACCAGAGAGATTCCTCATGC
ATTCCTGATGGGGCCAGATATGAATCTGCGGAGGTTGGCTGAATTAGTTGTCTTTATTCT
GAACCACATCATATTAGCAGCCGATGCAGAGTTCTTTGACATGACTCTAAGACGGCCAGG
GCAACATCAAGAAAAAACAAATTGCACTATGATCTTGGCTCCTCTTGTTGGCATTATCCT
CAATCTTATGGAAAGCAGCAGTACTTCAGGCCATAGGGAGTTAAATGATGTGATTACAGT
GTTCACAAGCATGGATTGCCCTGCCACAATCCATTTTGGGTTGCAGTACCTACTGAGCTA
CAATTGGAGCAATGTTCTCCGAGGTGACGCTTCCCTTGCAAAGCTAGCTCAGCTTGAAGA
ATTCTCCCATTACTTTATGCACATCACTATGTCAGCGGATGGCAATGAAGAGCAAGGTTT
CAGCACTGCCAGTAATGAAGAGAACAACTGCTGCATATGCTACAATTCCGATTCGGATAC
CACATTCGAGCCATGCCATCACAGGTCCTGCTACGGCTGCATAACCAGGCACCTCCTCAA
CAGCCAAAGGTGCTTCTTCTGCAATGCAGTGGTGACTTCAGTTACCAGGATAGCTGATTC
GCGCATCGAATCTCGGTCACCTTTGGCACCGTAAACCCGAAGAGAAGAAAGATGGATCAT
GCCGGATGTCTTATCCATTTTTGCTCGATTTGGAGGCGCAGACAGCTCGGAGCCTCGGAG
TTCTTCCCTTCTGCTTTCCTGGAAGACTGCATCGCCATGGTGGTGAAGTCAGAAAGGTTA
ATCTTTTCCCTTGTGTAAAGATCAGGTAATAGTTAAAACAAAAAAAGATTCAATAACAGG
ATTGCAGAAGGAGGCTTCTGCACAAGGTGGGAAGCCAGTACCACCCAAAGAAGGATTCAC
AGAATCGTGAAATTTTTGTAGGTTGTAGGGAAAAATTCCATTGTAAATACGAGATATGAA
ACAGAAAGGAGGTGTCAGATCTACATCAACCTTTTGTAATTATGTAGTTAAAATAAAGAA
ATACTAGATGGTTTATATTGGAGGGACCTCTAGTTTTTTTCCCTCGTATATGTTGAATAA
GAGCCTCACTATTTTTCTTAAAAAAAAAAA
clustalw multiple alignements is not computed in this case