cluster # 9317

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Oryza sativa
cluster # 9317 cluster # 9317 Sequences # 6 consensus # 4

see consensus multiple alignment with clustalw

Direct access to contigs :

consensus_9317#0 length = 976 sequences # 2
consensus_9317#1 length = 855 sequences # 2

consensus_9317#2 length = 566 sequences # 1
consensus_9317#3 length = 425 sequences # 1

consensusID : consensus_9317#0
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 976
fasta sequence

                              [CAAGAAGCAGAGAGGAGAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGGGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCCCGCTCCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAGGTAATTGGCCGTGTTCGTTCGAGTTGGTCGCCGTGCGGCGATGGCGACCGCCAAGTGTTCGATTTAATGCGAGTGCGGTTGCTCCGTGTTTTTGCAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAG-AAAATAAATGAGAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AK101309             [CAAGAAGCAGAGAGGAGAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGGGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCCCGCTCCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAGGTAATTGGCCGTGTTCGTTCGAGTTGGTCGCCGTGCGGCGATGGCGACCGCCAAGTGTTCGATTTAATGCGAGTGCGGTTGCTCCGTGTTTTTGCAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAG AAAATAAATGAG                                      ]
[-] EMBL CF318404             [                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                                   atggattGAGGAGTGCCCCGAGAAGGATTTGTAGGTGTTTTCGAGGGAGAGTGTGACAGCCAGGAGAGGCAGAGCTCGGGATGTTATTAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAAATAAAAAAGAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA]




>consensus_9317#0
CAAGAAGCAGAGAGGAGAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCG
TGGTCTCGAACACCTGGGGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAACCCGGC
GAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCCCGCT
CCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCT
CCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGA
CCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGCCGGGACGCT
CCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGC
GCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCC
GGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGA
GGTAATTGGCCGTGTTCGTTCGAGTTGGTCGCCGTGCGGCGATGGCGACCGCCAAGTGTT
CGATTTAATGCGAGTGCGGTTGCTCCGTGTTTTTGCAGGTGCTGCATAGGTTGTTCGGGT
ACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACG
GGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGAACGTGA
GCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTG
TGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTAT
AGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGAAAAAAAATAAAAAAAAAAAAA
AAAAAAAAAAAAAAAA

consensusID : consensus_9317#1
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 2
consensus length = 855
fasta sequence

                              [GAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGAGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCCCGCTCCGGTAC-GCGCCGCCGCTGCCGC-TGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGNCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAAGTGCTGCATAGGTTGTTCGGGTACGAGCCCGACGCCGGGGTTCTACAAGCGCGTTCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCNGAGAAGAAGGAAGGAGGAGGAGAAGGAGAACGTGAAGCAAGGCGAACCANGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAATTTTCAAAAAAAAAAAAAAAAA]

[+] EMBL AU065541             [GAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGAGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCCCGCTCCGGTAC GCGCCGCCGCTGCCGC TGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGNCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAAGTGCTGCATAGGTTGTTCGGGTACGAGCCCGACGCCGGGGTTCTACAAGCGCGTTCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCNGAGAAGAAGGAAGGAGGAGGAGAAGGAGAACGTGAAGCAAGGCGAACCANGA                                                                                                                                                                         ]
[+] EMBL AU093221             [                                                                                                                                                                        TACGGCGCCGCCGCTGCCGCTTGCTCCGATTCTACTGCCCGGTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGACCGCCGCGCGGGCGCCGCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGGTCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAGGTGCTGCATAGGTTGTTCGGGTACGAG CCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGG AGGAGGAGGAGAAGGAGAACGTG AGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAATTTTCAAAAAAAAAAAAAAAAA]




>consensus_9317#1
GAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTG
GAGCGGCGGTACGCGTTCTACGCGGCGTACCACTCCAACCCGGCGAACGTGCTCGTCCAC
GCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCCCGCTCCGGTACGCGCCGCCG
CTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGC
TTCCCCGTCGCCGTCGCGCTGGGCGCGTACTACGCGCTCATGGACCGCCGCGCGGGCGCC
GCCGCCGCGGCGCTCTGCGTCGCCGGGTGGGCCGNCGGGACGCTCCTCGCCGACGCCGCG
GGGCTCTGGACGTTCCGCGACGCGTGGAGGCCGCTGCTCACCGCGCAGGCCGTGCTCTGG
TCCGCCCAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGC
CCGGTGCAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAAGTGCTGCATAGGTTG
TTCGGGTACGAGCCCGACGCCGGGGTTCTACAAGCGCGTTCAGGCGAGGGTGGCGGCGAT
GCACAACGGGCCGCCGGCACCGGCGCCGGCGCCNGAGAAGAAGGAAGGAGGAGGAGAAGG
AGAACGTGAAGCAAGGCGAACCANGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCG
AGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTT
GTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAATTTTCAA
AAAAAAAAAAAAAAA

consensusID : consensus_9317#2
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 566
fasta sequence

                              [NGCTTTAGGACCCCGGNGGGCCCCCCCCNGGGGGTTTNGTTTCCNGGNGGCCCCCGGAANTTTTTTCCNNACCCGGGGGGTTTTGGAANTTCNGGNAGGGNNGAGCCGTTGTTNACNGCGCAGCCGGGTTTTTGTCCCCCCANTTNTTTTCCAACCCNTTTTTCGAGAAGCGGCGCCCGGCGCTGGTGGATGCCCCCGGTGCAGGCGGTTGGTGACGGGCCCCGCTNTTTTTTTTTCATCGAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAAAAAAAAAAAAAAAAAAAA]

[+] EMBL AA753818             [NGCTTTAGGACCCCGGNGGGCCCCCCCCNGGGGGTTTNGTTTCCNGGNGGCCCCCGGAANTTTTTTCCNNACCCGGGGGGTTTTGGAANTTCNGGNAGGGNNGAGCCGTTGTTNACNGCGCAGCCGGGTTTTTGTCCCCCCANTTNTTTTCCAACCCNTTTTTCGAGAAGCGGCGCCCGGCGCTGGTGGATGCCCCCGGTGCAGGCGGTTGGTGACGGGCCCCGCTNTTTTTTTTTCATCGAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAAAAAAAAAAAAAAAAAAAA]




>consensus_9317#2
NGCTTTAGGACCCCGGNGGGCCCCCCCCNGGGGGTTTNGTTTCCNGGNGGCCCCCGGAAN
TTTTTTCCNNACCCGGGGGGTTTTGGAANTTCNGGNAGGGNNGAGCCGTTGTTNACNGCG
CAGCCGGGTTTTTGTCCCCCCANTTNTTTTCCAACCCNTTTTTCGAGAAGCGGCGCCCGG
CGCTGGTGGATGCCCCCGGTGCAGGCGGTTGGTGACGGGCCCCGCTNTTTTTTTTTCATC
GAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCCAG
GCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGAAG
GAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGGAT
TCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATG
AACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAAAT
GAGTTTAAAAAAAAAAAAAAAAAAAA

consensusID : consensus_9317#3
NCBI blastX ! send the sequence to the NCBI site !
NCBI blastN ! send the sequence to the NCBI site !
Sequences nbr = 1
consensus length = 425
fasta sequence

                              [GAGGGATTCTTGTTTTNTNCATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGAGCGGCGGTACGNTNTCTACGGGNCGTACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCNTNTGGCCCATCCTCCTCACCGCNATGCTCCCGCTCCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGNTACTACGGGTCAATGGACCGCCGCGGGGCGCCGNCGCCGGGGTCTTGCTTAGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGNCGCGGGGCTCTGGACGTTCCGCAACGNTGGAAGCCGCTTGTNAACGGGAAGCCGTTNTCTGGTCGCCAATTTT]

[+] EMBL C28092               [GAGGGATTCTTGTTTTNTNCATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTGGAGCGGCGGTACGNTNTCTACGGGNCGTACCACTCCAACCCGGCGAACGTGCTCGTCCACGCCGTGTGCNTNTGGCCCATCCTCCTCACCGCNATGCTCCCGCTCCGGTACGCGCCGCCGCTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGCTTCCCCGTCGCCGTCGCGCTGGGCGNTACTACGGGTCAATGGACCGCCGCGGGGCGCCGNCGCCGGGGTCTTGCTTAGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGNCGCGGGGCTCTGGACGTTCCGCAACGNTGGAAGCCGCTTGTNAACGGGAAGCCGTTNTCTGGTCGCCAATTTT]




>consensus_9317#3
GAGGGATTCTTGTTTTNTNCATCATCCATGGCGCGGCTGCGGCGTGGTCTCGAACACCTG
GAGCGGCGGTACGNTNTCTACGGGNCGTACCACTCCAACCCGGCGAACGTGCTCGTCCAC
GCCGTGTGCNTNTGGCCCATCCTCCTCACCGCNATGCTCCCGCTCCGGTACGCGCCGCCG
CTGCCGCTGCTCCGATTCTACTGCCCGCTCTGCCGCCAGTACCTCCCCGTGCAGCTCGGC
TTCCCCGTCGCCGTCGCGCTGGGCGNTACTACGGGTCAATGGACCGCCGCGGGGCGCCGN
CGCCGGGGTCTTGCTTAGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGNCGCGGGGC
TCTGGACGTTCCGCAACGNTGGAAGCCGCTTGTNAACGGGAAGCCGTTNTCTGGTCGCCA
ATTTT

consensus multiple alignement with clustalw

CLUSTAL W (1.82) multiple sequence alignment


consensus_9317#1      ----------------GAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCG 44
consensus_9317#3      ----------------GAGGGATTCTTGTTTTNTNCATCATCCATGGCGCGGCTGCGGCG 44
consensus_9317#0      CAAGAAGCAGAGAGGAGAGGGATTCTTGTTTTCTTGATCATCCATGGCGCGGCTGCGGCG 60
consensus_9317#2      -NGCTTTAGGACCCCGGNGGGCCCCCCCCNGGGGGTTTNGTTTCCNGGNGGCCCCCGGAA 59
                                      * ***   *            *  *     *   * *  ***  

consensus_9317#1      TGGTCTCGAACACCTGGAGCGGCG-GTACGCGTTCTACGCGGCGTACCACT-CCAACCCG 102
consensus_9317#3      TGGTCTCGAACACCTGGAGCGGCG-GTACGNTNTCTACGGGNCGTACCACT-CCAACCCG 102
consensus_9317#0      TGGTCTCGAACACCTGGGGCGGCG-GTACGCGTTCTACGCGGCGTACCACT-CCAACCCG 118
consensus_9317#2      NTTTTTTCCNNACCCGGGGGGTTTTGGAANTTCNGGNAGGGNNGAGCCGTTGTTNACNGC 119
                         * *     *** ** * *    * *          * *  *  **  *    **   

consensus_9317#1      GCGAACGTGCTC--GTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCC 160
consensus_9317#3      GCGAACGTGCTC--GTCCACGCCGTGTGCNTNTGGCCCATCCTCCTCACCGCNATGCTCC 160
consensus_9317#0      GCGAACGTGCTC--GTCCACGCCGTGTGCGTGTGGCCCATCCTCCTCACCGCGATGCTCC 176
consensus_9317#2      GCAGCCGGGTTTTTGTCCCCCCANTTNTTTTCCAACCCNTTTTTCGAGAAGCGGCGC-CC 178
                      **   ** * *   **** * *  *     *    *** *  * *     **   ** **

consensus_9317#1      CGCTCCGGTACGCGCCGCCGCTGCCGCTGCT------CCGATTCTACTGCCCGCTCTGCC 214
consensus_9317#3      CGCTCCGGTACGCGCCGCCGCTGCCGCTGCT------CCGATTCTACTGCCCGCTCTGCC 214
consensus_9317#0      CGCTCCGGTACGCGCCGCCGCTGCCGCTGCT------CCGATTCTACTGCCCGCTCTGCC 230
consensus_9317#2      GGCGCTGGTGGATGCCCCCGGTGCAGGCGGTTGGTGACGGGCCCCGCTNTTTTTTTTTCA 238
                       ** * ***    *** *** *** *  * *      * *   *  **      * * * 

consensus_9317#1      GCCAGTACCTCCCCGTGCAGCTCGGCTTCC--CCGTCGCCGTCGCGCTG--GGCGCGTAC 270
consensus_9317#3      GCCAGTACCTCCCCGTGCAGCTCGGCTTCC--CCGTCGCCGTCGCGCTG--GGCGN-TAC 269
consensus_9317#0      GCCAGTACCTCCCCGTGCAGCTCGGCTTCC--CCGTCGCCGTCGCGCTG--GGCGCGTAC 286
consensus_9317#2      TCGAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTACAAGCGCGTCC 298
                       * **   ** *    *  * **** * *   *** *****  *  **    ***  * *

consensus_9317#1      ---TACGCGC------------TCATGGACCGCCG-CGCGGGCGCCGCCGCCGCGGCGCT 314
consensus_9317#3      ---TACGGGT------------CAATGGACCGCCG-CG-GGGCGCCGNCGCCGGGGT--C 310
consensus_9317#0      ---TACGCGC------------TCATGGACCGCCG-CGCGGGCGCCGCCGCCGCGGCGCT 330
consensus_9317#2      AGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGCGCCGGAGAAGA 358
                            * *               * ** ****** *   ******* *****  *    

consensus_9317#1      CTGCGTCGCCGGGTGGGCCGNCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGG--ACG 372
consensus_9317#3      TTGCTTAGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGNCGCGGGGCTCTGG--ACG 368
consensus_9317#0      CTGCGTCGCCGGGTGGGCCGCCGGGACGCTCCTCGCCGACGCCGCGGGGCTCTGG--ACG 388
consensus_9317#2      AGGAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAGCGCCGAGAAGG 418
                        *    *  **    *  *   *   **    ** **  *  *  * ** * *   * *

consensus_9317#1      TTCCGCGACGCG--TGGAGGCCGCTGCTCA---CCGCGC-AGGCCGTGCTCTGGTCCGCC 426
consensus_9317#3      TTCCGCAACGN---TGGAAGCCGCTTGTNA---ACGGG--AAGCCGTTNTCTGGTCG--C 418
consensus_9317#0      TTCCGCGACGCG--TGGAGGCCGCTGCTCA---CCGCGC-AGGCCGTGCTCTGGTCCGCC 442
consensus_9317#2      ATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTA 478
                       * **         * ** *  *    * *    *  *  * ** *   ** **      

consensus_9317#1      CAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTG 486
consensus_9317#3      CAATTTT----------------------------------------------------- 425
consensus_9317#0      CAGTTCTTCTCCCACGCCTTCTTCGAGAAGCGGCGGCCGGCGCTGGTGGATGGCCCGGTG 502
consensus_9317#2      TGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATACTAAGAAAATAA 538
                            *                                                     

consensus_9317#1      CAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAAGTGCTGCATAGGTTGTTCGGG 546
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      CAGGCGGTGGTGACGGCGCCGCTGTTCGTCTTCATCGAGGTAATTGGCCGTGTTCGTTCG 562
consensus_9317#2      ATGAGTTTAAAAAAAAAAAAAAAAAAAA-------------------------------- 566
                                                                                  

consensus_9317#1      TACGAGCCCGACGCCGGGGTTCTACAAGCGCGTTCAGGCGAGGGTGGCGGCGATGCACAA 606
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      AGTTGGTCGCCGTGCGGCGATGGCGACCGCCAAGTGTTCGATTTAATGCGAGTGCGGTTG 622
consensus_9317#2      ------------------------------------------------------------
                                                                                  

consensus_9317#1      CGGGCCGCCGGCACCGGCGCCGGCGCCNGAGAAGAAGGAAGGAGGAGGAGAAGGAGAACG 666
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      CTCCGTGTTTTTGCAGGTGCTGCATAGGTTGTTCGGGTACGAGCCGACGCCGGGGTTCTA 682
consensus_9317#2      ------------------------------------------------------------
                                                                                  

consensus_9317#1      TGAAGCAAGGCGAACCANGAGGAGAGCGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAG 726
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      CAAGCGCGTCCAGGCGAGGGTGGCGGCGATGCACAACGGGCCGCCGGCACCGGCGCCGGC 742
consensus_9317#2      ------------------------------------------------------------
                                                                                  

consensus_9317#1      AGTGTGACAGACAGGAGAGGCAGAGCTCGGGATGTTATGAACTTGTAATAGCTTGTTCAT 786
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      GCCGGAGAAGAAGGAGGAGGAGGAGAAGGAGAACGTGAGCAAGGCGACGCAGGAGGAGAG 802
consensus_9317#2      ------------------------------------------------------------
                                                                                  

consensus_9317#1      GTATAGTAGTAGTATAATAATAATACTAAGAAAATAAATGAGTTTAATTTTCAAAAAAAA 846
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      CGCCGAGAAGGATTCGTAGGTGTTTTCGAGGGAGAGTGTGACAGACAGGAGAGGCAGAGC 862
consensus_9317#2      ------------------------------------------------------------
                                                                                  

consensus_9317#1      AAAAAAAAA--------------------------------------------------- 855
consensus_9317#3      ------------------------------------------------------------
consensus_9317#0      TCGGGATGTTATGAACTTGTAATAGCTTGTTCATGTATAGTAGTAGTATAATAATAATAC 922
consensus_9317#2      ------------------------------------------------------------
                                                                                  

consensus_9317#1      ------------------------------------------------------
consensus_9317#3      ------------------------------------------------------
consensus_9317#0      TAAGAAAATAAATGAGAAAAAAAATAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 976
consensus_9317#2      ------------------------------------------------------