These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9324#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 2910 fasta sequence [CACTAAACAAATCCGCGACACAATCCTCCGCCATTAAACTCTCTCTCTCCTCTCGACACCACATCACAGCAGTGAGGTGGTTGTTGGCGGAGGAGGGAGGCTGGCTGCTGCTGCTGCTGCCGCCGCCTCCATCCATGGCGGCTTCTCCTCCTCCTCCTCCTCGTCCCCTGCTGCTGCTTCTCCCGTTGCTGCTC---TGGGGCGTGGTGGTTGCGGCGGCGGCGGCGACGGATACGTTGAGGCAGGGGGAGTCGCTGACGGGGGCGGCGACGCTGGTGTCGTCGCCGTCGGGGGTGTTCGAGGTGGGGTTCTTCGCGCCGGACCCGAAGCTGCCGTCGCGGCTCTACCTCGGCATCTGGTACCGCAGCATCTCGCCGAGAACCGTCGTCTGGGTCGCCAACCGCGCCGCGCCGGCCACCGCGCCGTCGCCGTCGCTCACGCTCGCGGCCAACGGCGAGCTCCGCGTGCTCGACGGCTCCGCCGCGGACGCGGACGCGCCGCTCTTGTGGAGGTCGAACGCGTCCACGCAGTCCGCGCCACGCGGCGGGTACAAGGCCGTCATCCAGGACACCGGCAGCCTCGAGGTGCGCAGCGACGACGGCACGCTGTGGGACAGCTTCTGGCACCCGTCGGACACCATGCTGTCCGGGATGCGCATCACCGTGCGCACGCCCGGGAGGGGCCCCTCCGAGCCGATGCGCTTCACGTCGTGGACCAGCGAGACGGACCCCTCGCCGGGGCGGTACGCGCTCGGCCTCGACCCGGCCAACTCCGGCCAGGCCTACATCTGGAGAGATGGCAATGTCACCATTTGGAGGTCAGGACAATGGACTGGGCAGAATTTTGTGGGCATTCCTTGGAGACCACTGTACTTGTATGGGTTCAAGCCAGCAAATGATGCAAACTTAGGTGCATACTACACTTACACTGCATCAAACACATCTCTGCAAAGGTTTGTTGTTATGCCAAATGGTACAGACATCTGTTACATGGTTAAGAAGTCAGCACAAGAGTGGGAGACTGTCTGGATGCAACCATCAAATGAGTGTGAGTACTATGCTACGTGTGGCGCAAATGCTAAATGCACTGCCATGCAAGATGGCAAGGCAAAATGTACCTGCCTAAAAGGATTTCAGCCAAAGTTGCTTGATCAGTGGAATATGGGAAATGGGAGTCAAGGTTGTGTCAGGAGCCCACCTTTGGGTTGTCAGGTGAACCAAACTGGGGATGGATTTCTTTCTATCCCAAACATCAAGTGGCCGGATTTCTCATACTGGCCATCTACGGTGCAAGATGAGAATGGATGCATGAATGCTTGCCTCAGCAACTGCTCATGTGGTGCCTATGTCTACATGACTACAATAGGATGTCTACTGTGGGGTAGCGACCTGATCGACATGTACCAGTTTCAGAGTGGGGGATATACCCTAAACCTCAAACTTCCTGCTTCTGAGTTACGCTCACATCATGCAGTTTGGAATAGCCACAATAGTGTCTGCAGTGGTGCTATTTGTTTTGCTAGCTTGCCTCTTCCTGTGGTGGAAGCGTGGGAGGAATATCAAAGATGTGATGCACAAAAGTTGGAGGTCAATGCATACGTCTACACGATCTCAGCAGAATAGTGGTATGCTGGACATCTCGCAGTCGATTCCTTTTGAAGACGACACAGAGGATGGAAAAAGTCATGAACTCAAAGTATACTCCTTTGACCGGATAAAAGCTGCCACTTGTAATTTCAGTGACTCCAACAAGCTTGGAGCAGGAGGATTTGGTCCTGTATATATGGGAAAATTACCTGGGGGAGAAGAAGTAGCCGTTAAGAGGCTTTGTAGGAAATCAGGTCAAGGCCTTGAGGAGTTCAAGAATGAGGTCATACTTATCGCAAAACTGCAGCATCGCAATCTTGTGAGACTATTAGGATGCTGCATACAGGGAGAAGAGAAGATCTTGGTGTACGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTCAATCCTGAGAAGCAAGGGCTCCTAGACTGGAGGAAACGGTTTGATATAATTGAAGGGATTGCTCGAGGGCTGTTATATCTCCACCGGGACTCAAGGTTGCGAGTTGTTCATCGTGATCTCAAGGCCAGCAACATTCTCCTGGACAAAGACATGAACCCCAAGATTTCAGATTTTGGAATGGCCAGGATGTTTGGAGGGGATCAAAACCAATTCAACACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAGCTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCTTGAGATGCATCCACATTGCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCC-TGATATCCCTGCGGTCATACTGATGTTGAGC-AGCGACAGCT-CCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTC-GGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTTGGTTGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGTGTAGATTAGTATTCAGGGGCCTTCACTCATGCTAATTTGTAAAATAACATTTATGTCATATATAAAATGGCATGTAAGTTTTGTGAAATGAAGCATGTGTAGATGATTGTGGTCGCCAAAAAAAAAGGAA] [+] EMBL AK102758 [CACTAAACAAATCCGCGACACAATCCTCCGCCATTAAACTCTCTCTCTCCTCTCGACACCACATCACAGCAGTGAGGTGGTTGTTGGCGGAGGAGGGAGGCTGGCTGCTGCTGCTGCTGCCGCCGCCTCCATCCATGGCGGCTTCTCCTCCTCCTCCTCCTCGTCCCCTGCTGCTGCTTCTCCCGTTGCTGCTC TGGGGCGTGGTGGTTGCGGCGGCGGCGGCGACGGATACGTTGAGGCAGGGGGAGTCGCTGACGGGGGCGGCGACGCTGGTGTCGTCGCCGTCGGGGGTGTTCGAGGTGGGGTTCTTCGCGCCGGACCCGAAGCTGCCGTCGCGGCTCTACCTCGGCATCTGGTACCGCAGCATCTCGCCGAGAACCGTCGTCTGGGTCGCCAACCGCGCCGCGCCGGCCACCGCGCCGTCGCCGTCGCTCACGCTCGCGGCCAACGGCGAGCTCCGCGTGCTCGACGGCTCCGCCGCGGACGCGGACGCGCCGCTCTTGTGGAGGTCGAACGCGTCCACGCAGTCCGCGCCACGCGGCGGGTACAAGGCCGTCATCCAGGACACCGGCAGCCTCGAGGTGCGCAGCGACGACGGCACGCTGTGGGACAGCTTCTGGCACCCGTCGGACACCATGCTGTCCGGGATGCGCATCACCGTGCGCACGCCCGGGAGGGGCCCCTCCGAGCCGATGCGCTTCACGTCGTGGACCAGCGAGACGGACCCCTCGCCGGGGCGGTACGCGCTCGGCCTCGACCCGGCCAACTCCGGCCAGGCCTACATCTGGAGAGATGGCAATGTCACCATTTGGAGGTCAGGACAATGGACTGGGCAGAATTTTGTGGGCATTCCTTGGAGACCACTGTACTTGTATGGGTTCAAGCCAGCAAATGATGCAAACTTAGGTGCATACTACACTTACACTGCATCAAACACATCTCTGCAAAGGTTTGTTGTTATGCCAAATGGTACAGACATCTGTTACATGGTTAAGAAGTCAGCACAAGAGTGGGAGACTGTCTGGATGCAACCATCAAATGAGTGTGAGTACTATGCTACGTGTGGCGCAAATGCTAAATGCACTGCCATGCAAGATGGCAAGGCAAAATGTACCTGCCTAAAAGGATTTCAGCCAAAGTTGCTTGATCAGTGGAATATGGGAAATGGGAGTCAAGGTTGTGTCAGGAGCCCACCTTTGGGTTGTCAGGTGAACCAAACTGGGGATGGATTTCTTTCTATCCCAAACATCAAGTGGCCGGATTTCTCATACTGGCCATCTACGGTGCAAGATGAGAATGGATGCATGAATGCTTGCCTCAGCAACTGCTCATGTGGTGCCTATGTCTACATGACTACAATAGGATGTCTACTGTGGGGTAGCGACCTGATCGACATGTACCAGTTTCAGAGTGGGGGATATACCCTAAACCTCAAACTTCCTGCTTCTGAGTTACGCTCACATCATGCAGTTTGGAATAGCCACAATAGTGTCTGCAGTGGTGCTATTTGTTTTGCTAGCTTGCCTCTTCCTGTGGTGGAAGCGTGGGAGGAATATCAAAGATGTGATGCACAAAAGTTGGAGGTCAATGCATACGTCTACACGATCTCAGCAGAATAGTGGTATGCTGGACATCTCGCAGTCGATTCCTTTTGAAGACGACACAGAGGATGGAAAAAGTCATGAACTCAAAGTATACTCCTTTGACCGGATAAAAGCTGCCACTTGTAATTTCAGTGACTCCAACAAGCTTGGAGCAGGAGGATTTGGTCCTGTATATATGGGAAAATTACCTGGGGGAGAAGAAGTAGCCGTTAAGAGGCTTTGTAGGAAATCAGGTCAAGGCCTTGAGGAGTTCAAGAATGAGGTCATACTTATCGCAAAACTGCAGCATCGCAATCTTGTGAGACTATTAGGATGCTGCATACAGGGAGAAGAGAAGATCTTGGTGTACGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTCAATCCTGAGAAGCAAGGGCTCCTAGACTGGAGGAAACGGTTTGATATAATTGAAGGGATTGCTCGAGGGCTGTTATATCTCCACCGGGACTCAAGGTTGCGAGTTGTTCATCGTGATCTCAAGGCCAGCAACATTCTCCTGGACAAAGACATGAACCCCAAGATTTCAGATTTTGGAATGGCCAGGATGTTTGGAGGGGATCAAAACCAATTCAACACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAGCTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCTTGAGATGCATCCACATTGCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCC TGATATCCCTGCGGTCATACTGATGTTGAGC AGCGACAGCT CCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTC GGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTTGGTTGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGTGTAGATTAGTATTCAGGGGCCTTCACTCATGCTAATTTGTAAAATAACATTTATGTCATATATAAAATGGCATGTAAGTTTTGTGAAATGAAGCATGTGTAGATGAT ] [+] EMBL CB641433 [ AATCCCCTACACAATCCTCCGCCATTAAACTCTCTCTCTCCTCTCGACACCACATCACAGCAGTGAGGTGGTTGTTGGCGGAGGAGGGAGGCTGGCTGCTGCTGCTGCTGCCGCCGCCTCCATCCATGGCGGCTTCTCCTCCTCCTCCTCCTCGTCCCCTGCTGCTGCTTCTCCCGTTGCTGCTCGTTTGGGGCGTGGTGGTTGCGGCGGCGGCGGCGACGGATACGTTGAGGCAGGGGGAGTCGCTGACGGGGGCGGCGACGCTGGTGTCGTCGCCGTCGGGGGTGTTCGAGGTGGGGTTCTTCGCGCCGGACCCGAAGCTGCCGTCGCGGCTCTACCTCGGCATCTGGTACCGCAGCATCTCGCCGAGAACCGTCGTCTGGGTCGCCAACCGCGCCGCGCCGGCCACCGCGCCGTCGCCGTCGCTCACGCTCGCGGCCAACGGCGAGCTCCGCGTGCTCGACGGCTCCGCCGCGGACGCGGACGCGCCGCTCTTGTGGAGGTCGAACGCGTCCACGCAGTCCGCGCCACGCGGCGGGTACAAGGCCGTCATCCAGGACACCGGCAGCCTCGAGGTGCGCATCTACGACGGCACTCTGTGGGACAGCTTCTGGCACCCGTCGGACACCATGCTGTCCGGGATGCGCATCACCGTGCGCACGCCCGGGA ] [+] EMBL CA999435 [ AAAACTGCAGCATCGCAATCTTGTGAGACTATTAGGATGCTGCATACAGGGAGAAGAGAAGATCTTGGTGTACGAGTACATGCCTAACAAAAGTCTAGATGCATTCCTCTTCAATCCTGAGAAGCAAGGGCTCCTAGACTGGAGGAAACGGTTTGATATAATTGAAGGGATTGCTCGAGGGCTGTTATATCTCCACCGGGACTCAAGGTTGCGAGTTGTT ] [-] EMBL CB641434 [ CATTTTCCTGGACAAAGACATGAACCCCAAGATTTCAGATTTTGGAATGGCCAGGATGTTTGGAGGGGATCAAAACCAATTCAACACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAGCTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCTTGAGATGCATCCACATTGCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCC TGATATCCCTGCGGTCATACTGATGTTGAGC AGCGACAGCT CCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTC GGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTGGGTGGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGTGTAGATTAGTATTCAGGGGCCTTCATTCATGCTAATTTGTAAAATAACATTTATGTCATATATAAAATGGCATGTAAGTTTTGTGAAATGAAGCATGTGTAGATGATTGTGGTCGCCAAAAAAAAAGGAA] [-] EMBL CB658280 [ GAGGGGATCAAAACCAATTCATCACGAATCGTGTGGTTGGAACATTTGGCTATATGTCGCCGGAATATGCTATGGAAGGCATTTTCTCAGTAAAGTCCGATATTTATAACTTTGGAGTTCTAATGTTGGAGATCATCACAGGAAAGAGGGCTTTGAGCTTTCATGGTCAACAAGACTCCCTAAACATTGCAGGATTTGCATGGCGACAATGGAATGAAGACAAGGGCGAGGAACTGATTGATCCATTGATAAGAGCATCGTGCTCACTTCGACAAGTCATGAGATGCATCCACATTGCATTCCTATGTGTTCAAGATCATGCGCAAGAAAGTCC TGATATCCCTGCGGTCATACTTATGTTGAGC AGAGACAGGT CCAGCTTTa ] [-] EMBL AB038524 [ GCATTGCTATGTGTTCAAGATCATGCGCAAGAACGTCCTTGATATCCCTGCGGTCATACTGATGTTGAGCAAGCGACAACTCCCAGCCTTCCCATGCCAAGACCGCCTACCCTGATGCTCCATGGTCGTTCGGGCTGAGACGAGCAAATCAAGTGAGAAGGATCAGAGCCACTCCATCGGTACTGTGTCAATGACACAATTGCATGGAAGATAGCTTAGCAGGGACAACATTGTGAAAATCATTAACAGCTTGGTTGTTCTTTTTTTCCCCTTTTCTCTGCTATTACAAAGGTATTGTCTTGT ] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||