These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9327#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1200 fasta sequence [CCTCCGCTCCGGCCCCCTCATCGATCGAGCTCGCAGCCGCCGTGTTCCCCGCC-GGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTGGACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGCAAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAA-GACTTGTGTAATAGGACATATGACATTACAGTGCAAA-GAGGGGTCAAGACTCTGAGTTCTTCCCATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTG-AGGGATGTCGTCAGTAAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGGAAAACTGCTGAAGATGACAGTG-AAGAGGAATCAAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGNTTAT] [+] EMBL AK068320 [CCTCCGCTCCGGCCCCCTCATCGATCGAGCTCGCAGCCGCCGTGTTCCCCGCC GGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTGGACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGCAAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAA GACTTGTGTAATAGGACATATGACATTACAGTGCAAA GAGGGGTCAAGACTCTGAGTTCTTCCCATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTG AGGGATGTCGTCAGTAAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGGAAAACTGCTGAAGATGACAGTG AAGAGGAATCAAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTTTTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATGTGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCT ] [+] EMBL AF074781 [ CGATCGAGCTCGCAGCCGCCGTGTTCCCCGCCGGGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAAGAAGCTGGACACCCGCTTCCCCGCGCCTCGGATTAAGAAAATCATGCAAGCAGATGAAGATGTTGGCAAGATTGCTTTAGCTGTACCTGTTCTAGTGTCAAAAGCATTGGAATTATTTCTGCAA GACTTGTGTAATAGGACATATGACATTACAGTGCAAA GAGGGGTCAAGACTCTGAGTTCTTCCCATTTGAAACAGTGCATACATAGTTATAATGTTTACGATTTCTTG AGGGATGTCGTCAGTAAAGTTCCAGACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGAGGAAAACTGCTGAAGATGACAGTG AAGAGGAATCNAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTANAAGGCGTGGGAAGGGTCCGGGAAAAAGCCGACGTGGTGGGCGTGTGTCTGAAAAGGANATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGANTTTCCTCCANGTCAATTTAACAAGCCTTCTCAGCTGAAGGTNGATNTTTCAGTTGATGGTACANATGCCATTGAAAC AAGGA GCTA CCCATTAAGCAACGCCAGANC TCTCTAAGGAACATTGACTTAAACATANAACTTACTG ] [+] EMBL AF074782 [ cnATCGAGCTCGCANCCGCCGTGTTCCCCGCC GGGGAAGGTCGTCCTTGCCGTTGGGTGGTGTTCCCGGCGCTGGATTGACGCCATGAGGAANAAGCTGGACANCCGCTTCCCCGCGCCTCGGATTAATAAAATCATGCAANCAGATGAAGATNTTGGCNAGATNGCTTTATCTGTACCTGTTCTAGTGTCAAAATCATTGGAATTATTTCTGCAANGACTTGTGTAATAGGACATATGACATTACAGTGCAAACGAGGGGTCAANACTCTNAGTTCTTCCCATTTGAAACAGTGCATNCATACTTATAATGTTTACAATTTCTTGAAAGGATGTCCTCAATAAAGTTCCANACATGGGTACATCTGATGCTGGTGTTGATGATAAACTTGGCAAAAGGANGAAAACTGCTGANCATGACAGTGAAAGANGAATCAAAGCGGACAAGAAATGAAGCNGCAAGCCAGACAAGCACTGGTNCAAGGCGTGGGAAGGGTCcg ] [+] EMBL CF309613 [ CAAAGCGGACAAGAAATGAGGCAGCAAGCCAGACAAGCACTGGTAGAGGGCGTGGGAGGGGTCGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTGCTGAAGC ] [+] EMBL CA765925 [ aGGGGAAGAGGCCGACGTGGTGGGCGTGTGTCTGAGAGGGAGATTATTTCCGCTTACGAAAAATTTGAGGAGAACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGTACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGGGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTACTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGN ] [+] EMBL AK060192 [ AACCATGAGTTTCCTCCAGGTCAATTTAGCAAGCCTTCTCAGCTGAAGGTAGATGTTTCAGTTGATGGCACAGATGCAATTGAAACAAAGGAGGCTACCCCATTAAGCAACGCAAGAGCTTCTCTAAGGAACATTGACTTAAACATAGAGCTTACTGACTATGATGATGAGGGTTCAGCTCCACTGGAGGTCCAGCCTCCAGCTCCGGCAGCAGGTGTGGTTACAACCTCTTCAGGACCACTTGTTTCGGAGGTGAACGAAGAGGCGAAGACCAAAGACTTTCTAGGATGGCAATTGCCTGAGCTGACCAAGATGGCCATGGACCCTGTTCAGTTTGCCTTGTCTTCAAACCATAGGTTAGAGGAGGATGAGGATTATGACAACGAAGAATGATAACTTGCCCCTTTTAGGTTAAGAAGCTGATAGATAGACATGACTTTTGTCTATTGTACATCCTTGTAGCCCAGCTTAACTCTGTAGCTGATCTTGTATAATATGTGTACCTGCTGAAGCTGCAGTAGTTTAGGATGTTACAGAGGTTTATCGATCGATAGCTAGCAACTATGTTGACAGACAGATTCATCAGTTGTACATCCTATCTGATCTCCAGTTTAT] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||