These datas are free for academic use only, please contact me for any other use. Oryza sativa see consensus multiple alignment with clustalw Direct access to contigs :
consensusID : consensus_9331#0 NCBI blastX ! send the sequence to the NCBI site ! NCBI blastN ! send the sequence to the NCBI site ! Sequences nbr = 6 consensus length = 1555 fasta sequence [GAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAACCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAATCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGGTGATGAACCTCCGCAAAAGAAGATTAAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACCGGGACAAGAGGAACCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAG-CTGCTAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGATGGCGTACATGGATTTTGCGGACAACGGTTCCTTGTCGAAAGCATACGAACTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTCTAGTACTGTAGTAAT-CTCCATCCCCCCTAATATATGCGATTCTAGTGAGCCGTGAATTGGCTACCTCCGGACTGTTACATTCTAGCCGTGTTATGTACTTTGTTGGCAGTTGGGACCGTGTTGGTAAATTTGCCCGACAGATTTGGCAATTTTGGAACCTCTTGACTTCGTAATCATTCTTATCATAATATAGTGCTTTGTGGCCTAAA] [+] EMBL AK063918 [GAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAACCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAATCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGGTGATGAACCTCCGCAAAAGAAGATTAAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACCGGGACAAGAGGAACCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAG CTGCTAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGATGGCGTACATGGATTTTGCGGACAACGGTTCCTTGTCGAAAGCATACGAACTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTCTAGTACTGTAGTAAT CTCCATCCCCCCTAATATATGCGATTCTAGTGAGCCGTGAATTGGCTACCTCCGGACTGTTACATTCTAGCCGTGTTATGTACTTTGTTGGCAGTTGGGACCGTGTTGGTAAATTTGCCCGACAGATTTGGCAATTTTGGAACCTCTTGACTTCGTAATCATTCTTATCATAATATAGTGC ] [+] EMBL AK103446 [GAAGAAGAATCCAGTGATAGCTCAGACAGTGACTCTGAATCTGAGTCTGATTCTGATGAACCAGCAAAACCTACTATTCCTGCAAAAAGGCCACTGACAAAAGACACAAAGAAGGGACAATCCAAGGATGAATCTGAAGATAGTTCTGATGAGAGTTCTGAGGAAAGTGGTGATGAACCTCCGCAAAAGAAGATTAAGGATTCTACAACTTCTGGTACTACCAAGCCTTCCCCTAAGGCTACCAAGAAAGAAATCAGCAGTGATGACGAAAGTGATGAAGATGACAGTTCTGATGAAAGCTCTGATGAGGATGTTAAGCAAAAACAAACTCAAGCTAAGAAGCAAGCACCAGTAGCACAAGAGAGTAGCAGCTCCGATGAATCTTCTGAAGAAGATAGTGACATGGAAAGTGATGAACCAGCAAAAACTCCCCAAAAGAAGGAAACTGCTGTGTCTGTTGGTTCGAATAAGTCTGCGACAAAACCGGGACAAGAGGAACCAAAAACGCCTGCCAGCAACCAAAATCAAGCTACCGGGTCAAAGACTCTTTTTGTTGGAAATTTACCATACAATGTGGAGCAAGAACAAGTGAAGCAATTTTTCCAGGAGGCAGGTGAAGTTGTTGATATTCGTTTCAGTACCTTTGAAGATGGGAACTTCAGGGGCTTTGGACATGTTGAATTTGCCACAGCGGAAG CTGCTAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGGCCGGTCAGGCTTGACCTGGCTCGTGAGAGAGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGTTCTTTCAAGAAGCCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTTTGATACTTCTCTTGACATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGATGGCGTACATGGATTTTGCGGACAACGGTTCCTTGTCGAAAGCATACGAACTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGACGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTCTAGTACTGTAGTAAT CTCCATCCCCCCTAATATATGCGATTCTAGTGAGCCGTGAATTGGCTACCTCCGGACTGTTACATTCTAGCCGTGTTATGTACTTTGTTGGCAGTTGGGACCGTGTTGGTAAATTTGCCCGACAGATTTG ] [+] EMBL AU063108 [ TACCTNTGAAGATGAGAACTTCAGGGGCTTTGGACATGGTGAATTTGCCACAGCGGAAGTCT TGAAGAAGGCACTTGAACTTGCTGGTCATGACCTGATGGGACGTCCGGTCAGGCTTGACCNGGCTCGTGAGAGNGGCGCGTATACTCCTGGCAGCGGGAGGGACAATAGNNCTTTCAAGAANNCTGCTCAAAGCTCAGGAAACACTATATTTATTAAAGGCTNTGATACTT ] [+] EMBL CB663708 [ ATACACCAGATCCGGAATTCACTTGAAGAACATTTTGGCTCGTGTGGAGAGATTACACGGGTTTCAATTCCAAAGGATTATGAAACCGGTGCAAGCAAAGGGATGGCGTACATGGATTTTGCGGACAACGGTTCCTTGTCGAAAGCATACGAACTGAATGGATCTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGCTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAGACGTGGTGGACGTGGTGATGGTAGCCGTGGGCGCGGTGACCGTGGACGTGGTAGAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGCGCTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTCTAGTACTGTAGTAATCCTCCATCCCCCCT ATATATGCGATTCTAGTGAGCCGTGAATTGGCTA ] [-] EMBL CB638117 [ AGCAAAGGGATGGGGTACATGGATTTTGCGGACAACGGTTCCTTGTTGAAAGCATACGAACTGAATGGATTTGACCTCGGTGGATACAGCTTGTATGTTGATGAAGCGAGGCCTAGGCCCGATAACAACAGAGAGGGTGGGTTCAGCGGTGGAAGAGACTTTAACAGCAGTGGGAGAGGAGGAAAACGTGGTGGACGTGGTGATGGTAACCGTGGGGGCGGTGACCGTGGACGTGGTAAAGGCTTTGGTAGGGGTGACAGGGGCCATGGTGGACGGGGTACACCGTTCAAGCAGAGGGTTGGTACACCTAGTGCAGGAAAGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTTTAGGACTGTAGTAAT TTCCATCCCCCCTAATATATGCGATTTTAGTGAGCCGTGAATTGGCTACCTCCGGACTGTTACATTTTAGCCGTGTTATGTACTTTGTTGGCAGTTGGGACCGTGTTGGTAAATTTGCCCGACAGATTTGG ] [+] EMBL AF522009 [ TAGTGCAGGAAGGAAGACAACATTCGGTGACGACGACTAGACGAACAATTTGAGCCGATTTTGTTCTAGTACTGTAGTAAT CTCCATCCCCCCTAATATATGCGATTCTAGTGAGCCGTGAATTGGCTACCTCCGGACTGTTACATTCTAGCCGTGTTATGTACTTTGTTGGCAGTTGGGACCGTGTTGGTAAATTTGCCCGACAGATTTGGCAATTTTGGAACCTC GACTTCGTAATCATTCTTATCATAATATAGTGCTTTGTGGCCTAAA] clustalw multiple alignements is not computed in this case |
Copyright Mon Feb 16 12:49:02 CET 2004 Hubert Wassner (hubert.wassner@noos.fr) | ||||